Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0296 TCAGAAACTCCTATACCTAGAATTCTTTTGTCTAGCCCTTCTTTGTCACCATCATCAATACCAAAACCAACACCATCACCCACTATTTTATCACCTAGCCCTTCTTTTTCGCCATCACCAATACATAAACTAGCACCAACACCCATAAGTTTCTCACCTACCCCTTCTTCCTTGTCACCATTATCACCATCATTGCCACCAATACCAAAATCAACACCTCCTAGATCACTTTTATCACCATCATCAATATCAAAATCATTACCAAAAGGTAGCCACCGATTTTGGAAAAGGAACGTCATTATAGGTGTTACATGTGCAATATTGGGAGGATTCATTATAAGCATTATAATTTGTTATTTTAGATATAACTCATTAACTTTAATGGTCAAATTTTGTTTGACAACAAAGAGTGACGTAAATATTGAAGAATTCTTAAAAGATCACGGATCGGTAGCATTGAAAAGATATACATTTTCAGAAATAAAGAAAATGACCAATTCTTTTAAAGTTAAACTTGGTCAAGGTGGTTTTGGTGCAGTATATAAAGGAAAACCAACAACCGGATGCCCAGTGGCTGTGAAGTTATTAAATGTGTCTAAAAGAAATGGTGAAGAGTTTATCAATGAGGTTGCTAGCATCAGTAGAACCTCTCATGTTAATATTGTCACACTTTTAGGATTTTGTTTAGAAGGTCGCAAGAAAGCTCTCATCTATGAGTTCATGGCTAACGGTTCCTTAGACAAGTTTATCTACAATAGAGGGCCAGAATCCATTGCATCTTTGAGTTGGGAGAATTTGTATCAGATCTCAATAGGGACAGCTCGAGGGTTGGAGTACTTGCACAGGGGATGCAATACTCGAATTTTACATTTTGACATAAAACCACATAATATTCTTTTGGATGAGAACTTTTGCCCTAAGATATCAGATTTTGGGCTAGCAAAGCTTTGTCCAAGGAAAGAAAGCATTATTTCCTTGTCAGATACTAGAGGGACAATGGGGTATGTGGCTCCAGAAATGTGCAATAGACATTTCGGTGGAATTTCAAATAAGTCTGATGTTTATAGCTATGGGATGATGTTGCTTGAAATGGTAGGAGGGAGGAAGAATATTAATGCTGAAGCCAGTGATACAAGTGAGATATATTTCCCATATTTGGTATATAGGAGGCTTGAGGAGGACAACAATTTAAGACCAGATCAAGTGATGACCATGGAAGAAAATGATATTGTTAGGAGAATGACCATGGTGGGATTATGGTGCATTCAAACATTTCCCAATGATAGACCTACAATGAGTGGAGTGGTAGAAATGTTGGAAGGCAACATTAATTCCTTGGAAATGCCCCCAAAACCTTTGTTTTCGTCTCCTACTAGATCAGTAACATGTTCTTTCTCTTGA 1401 0.3726 SETPIPRILLSSPSLSPSSIPKPTPSPTILSPSPSFSPSPIHKLAPTPISFSPTPSSLSPLSPSLPPIPKSTPPRSLLSPSSISKSLPKGSHRFWKRNVIIGVTCAILGGFIISIIICYFRYNSLTLMVKFCLTTKSDVNIEEFLKDHGSVALKRYTFSEIKKMTNSFKVKLGQGGFGAVYKGKPTTGCPVAVKLLNVSKRNGEEFINEVASISRTSHVNIVTLLGFCLEGRKKALIYEFMANGSLDKFIYNRGPESIASLSWENLYQISIGTARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESIISLSDTRGTMGYVAPEMCNRHFGGISNKSDVYSYGMMLLEMVGGRKNINAEASDTSEIYFPYLVYRRLEEDNNLRPDQVMTMEENDIVRRMTMVGLWCIQTFPNDRPTMSGVVEMLEGNINSLEMPPKPLFSSPTRSVTCSFS* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0296 466 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 95 465 - -
Pvu10g0296 466 Gene3D Phosphorylase Kinase; domain 1 138 240 - -
Pvu10g0296 466 MobiDBLite consensus disorder prediction 1 17 - -
Pvu10g0296 466 Gene3D Transferase(Phosphotransferase) domain 1 241 448 - -
Pvu10g0296 466 MobiDBLite consensus disorder prediction 1 88 - -
Pvu10g0296 466 MobiDBLite consensus disorder prediction 18 34 - -
Pvu10g0296 466 ProSitePatterns Protein kinases ATP-binding region signature. 172 194 IPR017441 GO:0005524
Pvu10g0296 466 ProSiteProfiles Protein kinase domain profile. 166 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0296 466 SUPERFAMILY Protein kinase-like (PK-like) 151 440 IPR011009 -
Pvu10g0296 466 Pfam Protein kinase domain 169 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0296 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Pvu10g0296 466 PANTHER RUST RESISTANCE KINASE LR10-RELATED 95 465 IPR045874 GO:0004672
Pvu10g0296 466 SMART serkin_6 166 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0296 466 MobiDBLite consensus disorder prediction 59 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0296 Pvu-Chr10 4139870 4143592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0296 107 455 Receptor kinase-like Gene Family AT4G18250 54.190 4.24e-125 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu10g0296 Pkinase 4.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0296 - - pvu:PHAVU_010G028300g 795.423