Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0295 ATGGAATGTGTGGTTTCAGCTTCTGCTGCTGCTTCTTCTTCTTCTTCATCATCAAAATCCAAAACCCATTGGAGATACGATGTGTTTTTGAACTTCAGAGGAGGAGACACTCGTAGCACCTTCGTATCTCATCTCCACAGTGCCCTCTCAAACGCAGGAGTCCACACTTTCATCGATGCGGGACTTGACAAGGGGCAGAACCTGGGGCCAGAACTACTGCGAGCAATTGAAGGGTCTCAGATAGCAATAGTTGTTTTCTCCAAAAACTACGCTGAATCAGGCTGGTGCCTTGACGAGTTGGCAAAAATTGCAGAATGTCACAGAAGTCAAGGGCAGGTGGTTGTGCCCATATTTTACGACGTCGCTCCATCGGTTGTTCGTAAACAAACAGGTGCTTTTGGAAAAGCCATGGAAGCAGTTGCTGTGAGAACATTCCCGAGTAAGATCTTGCTAGATTCGTTGGTGAGATGGAGCGATGCACTCTACCAGGTTGCAAATTTTACTGGTTGGGATATGAGGCAATGCAGGGATGAAGCTGAAGAAGTGAAGAAAATTGTAAAGGGAGTTTTGGCAGAGCTAGACAACACATTACTATCTATTACCCAATTTCCAGTTGGCTTAGAATCTCGTGTGAAAGAAGTGATTATGTTTATTGAAAATCAATCAAACAAAGGTTGTAAAATAGGGATATGGGGGATGGGAGGATTGGGTAAAACAACAACAGCAAAAGCCATCTACAATCAAATTCGTCGTAAATATGTCCATAGAAGTTTCATTGAAAGTATTAGACAAGTTTGTGAACAGGAGAGTAAAGGGTATATTCATTTGCAAGAACAACTTCTTTTAGATGTTCTAAAAACAGAAATGAAGGTAAATAGTACCGCAGCAGGGACCACTTTGATTGAGGAAAGACTTCGTGGAAAAAGCACACTCCTTGTACTTGATGATGTGACTAAGTTTGAGCAAGTCCATGCCCTATGTGGAAATTGTAAATGGATAAGCTCAGGAAGTGTGTTTATGGTTACATCTAGAGACATACGATTACTTCATTTGCTTGAAGTTGATTACATTTATAAAGTGGAGGAAATGAATGAAAATGAGTCTCTTGAGCTTTTCAGTTGGCATGCTTTTAGGGAAGTAACTCCGACACAAGACTTCATTGAGCTTTCAAGAAATGTAGTTTCTTACTGTGGAGAACTACCACTAGCACTTGAAGTGCTTGGATCTTACTTACACAAGAGAACCAAACAGGACTGGAAAAGTGTATTATCAAAGCTAAGAATAATTCCCAATGATCACGTTCAGGAGAAATTGAGAATAAGCTTTGATGGTCTACAGGATGAGATGGAAAGGGATATATTTCTTGACATTTGCTGTTTCTTTATAGGAAAAGAGAGAGGCTATGTTACGGAGATACTGAATAGCTGTGGACTGCATGCTGATATTGGAATAACAGTTCTTATAGAGCGTAGTCTGGTGAGAATTGAAGAGAATAATAAACTTGGAATGCATGATTTGGTACGAGACATGGGAAGAGAGATTATTCGTCACAGTTCACCAAAGGATCCTGGGAAACGCAGCCGATTGTGGTTTCATGAGGATGTTCTTGATGTATTGACAAATAACACTGGGAGAGACACCATTGAGGGATTGGCATTGAAATTGCATGGAACTGGTAGAGATTGCTTTGAAGCAAGTGCTTTTAAGGAAATGAAAAGGTTGAAACTGTTGAAACTTGATTCTGTACAACTCACTGGATCTTTTGCGCATCTTTCTAAGCAGCTGAGATGGATCTGTTGGCGAGGATTTCCTTTGAAATATATACCTGTAAACTTTTATCAAAGAAGTGTTGTTGCCATAAACTTAAAACACAGTAATCTGAAACTAGTCTGGAAGGAAACTCAGCTGCTGGAGTGCCTAAAAATCCTCAATCTTAGTCATTCCAAAAACTTGACCACCACCCCAGACTTTTCTAAACTACCTAATCTTGAAAAGCTCATTCTCAAAGATTGCCCAAATTTGTGCAAGCTTGACAAGTCCATTGGAGATCTCTGCAAACTTCTGCTGATAAATTTGAAGGACTGCACAAGTCTTAGCAATCTGCCAAGGAGAACCTACAAGTTGAAATCTGTGAAAACTCTAATCCTTTCTGGTTGTTTGAAGATGGACAGGTTGGATGAAGACATAGTGCAGATGGAATCCTTGACAACTTTAATAGCGGAAAATATTGCTGTGAAACAAGTTCCCTTTTCGATAGTAAGATCAAAAAGCATCGGATATATATCTCTGTGTGGACATGAAGGATTATCACGTAATGTTTTTCCATCCATCATTTGGTCTTGGATGTCACCAAAATTAAATCCCTTATCTGGTATTTACCTATGTTCGAGCATGTCATCGACTCTAACCTCCATAGATGTGCAGAGTAACAATATGGGTGATCTAGCATCAACCCTTAGAAGCCTTTCAAAACTTCGTAGTGTTTTGTTGCATTGCGACACGGAGTTTCAGCTATCTAAAGAATTAAGAACAATTCTGGATGATGTACATGACGTAAGTTCTATTAAATTAGAAACAAGGTCGAATAAATCACAGATAACAATGCATTCCTTGAGGCCTTATTTGATTGGAATAGGAAGCTACCATGAAGTCTTCAATACTCTCAACAAGAGCATATCAGAGGGATTGAGTACCATTGAGTCTTGTGATGTTTTTCTCCCGGGTGACAACTATCCATTTTGGTTGACTCATACAGGTGAAGGACATTCAGTGTTTTTCAAAGTGCCTCAGGATCATAATTGTCTCATGAAGGGAATGTTAGTGTGTGTTGTTTATTTATCACCCCCTGAAAAAGTGGCAAAGAAATGCCTTCTTAGTGTATTGATAGTTAATTACACAAAGTGCACCATTCAAATCTACAAGCGAGACACAGTAATTTCCTTCAATGAAGAAGATTGGAAAGGCATAATATCACAGCTAGGATTTGGTGACCAAGTAGAGATTTTCGTAACTTTTGGGCATGGATTGATTGTCATGAAGATGGCTATCTATCTATTATTTACTGAATCAACTGACATGCAAATGAATCCTTCTCTCGAACCAAAGGAAAATACCCTTCTTAGATTCCTAAAGAGAATTGTAATGTGTGACTACTGGTAA 3159 0.3932 MECVVSASAAASSSSSSSKSKTHWRYDVFLNFRGGDTRSTFVSHLHSALSNAGVHTFIDAGLDKGQNLGPELLRAIEGSQIAIVVFSKNYAESGWCLDELAKIAECHRSQGQVVVPIFYDVAPSVVRKQTGAFGKAMEAVAVRTFPSKILLDSLVRWSDALYQVANFTGWDMRQCRDEAEEVKKIVKGVLAELDNTLLSITQFPVGLESRVKEVIMFIENQSNKGCKIGIWGMGGLGKTTTAKAIYNQIRRKYVHRSFIESIRQVCEQESKGYIHLQEQLLLDVLKTEMKVNSTAAGTTLIEERLRGKSTLLVLDDVTKFEQVHALCGNCKWISSGSVFMVTSRDIRLLHLLEVDYIYKVEEMNENESLELFSWHAFREVTPTQDFIELSRNVVSYCGELPLALEVLGSYLHKRTKQDWKSVLSKLRIIPNDHVQEKLRISFDGLQDEMERDIFLDICCFFIGKERGYVTEILNSCGLHADIGITVLIERSLVRIEENNKLGMHDLVRDMGREIIRHSSPKDPGKRSRLWFHEDVLDVLTNNTGRDTIEGLALKLHGTGRDCFEASAFKEMKRLKLLKLDSVQLTGSFAHLSKQLRWICWRGFPLKYIPVNFYQRSVVAINLKHSNLKLVWKETQLLECLKILNLSHSKNLTTTPDFSKLPNLEKLILKDCPNLCKLDKSIGDLCKLLLINLKDCTSLSNLPRRTYKLKSVKTLILSGCLKMDRLDEDIVQMESLTTLIAENIAVKQVPFSIVRSKSIGYISLCGHEGLSRNVFPSIIWSWMSPKLNPLSGIYLCSSMSSTLTSIDVQSNNMGDLASTLRSLSKLRSVLLHCDTEFQLSKELRTILDDVHDVSSIKLETRSNKSQITMHSLRPYLIGIGSYHEVFNTLNKSISEGLSTIESCDVFLPGDNYPFWLTHTGEGHSVFFKVPQDHNCLMKGMLVCVVYLSPPEKVAKKCLLSVLIVNYTKCTIQIYKRDTVISFNEEDWKGIISQLGFGDQVEIFVTFGHGLIVMKMAIYLLFTESTDMQMNPSLEPKENTLLRFLKRIVMCDYW* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0295 1052 Gene3D - 362 446 IPR042197 -
Pvu10g0295 1052 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 28 1019 - -
Pvu10g0295 1052 SMART till_3 25 167 IPR000157 GO:0007165
Pvu10g0295 1052 SUPERFAMILY L domain-like 503 831 - -
Pvu10g0295 1052 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 170 IPR035897 -
Pvu10g0295 1052 Pfam TIR domain 26 199 IPR000157 GO:0007165
Pvu10g0295 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 457 IPR027417 -
Pvu10g0295 1052 Gene3D Ribonuclease Inhibitor 552 874 IPR032675 -
Pvu10g0295 1052 Pfam NB-ARC domain 209 427 IPR002182 GO:0043531
Pvu10g0295 1052 Gene3D - 22 194 IPR035897 -
Pvu10g0295 1052 Gene3D - 195 357 IPR027417 -
Pvu10g0295 1052 ProSiteProfiles TIR domain profile. 24 193 IPR000157 GO:0007165
Pvu10g0295 1052 PRINTS Disease resistance protein signature 227 242 - -
Pvu10g0295 1052 PRINTS Disease resistance protein signature 304 318 - -
Pvu10g0295 1052 PRINTS Disease resistance protein signature 397 411 - -
Pvu10g0295 1052 PRINTS Disease resistance protein signature 635 651 - -
Pvu10g0295 1052 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 1019 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0295 Pvu-Chr10 4120276 4127007 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0295 26 752 WRKY Transcription Factor Family AT4G12020 28.610 1.46e-73 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0295 - - vra:106773334 1526.53