Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0294 ATGGAGTTCGCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCATCCTTCTTAAACTCAGAACCCCAGTTCAGATACGATGTGTTCATCAACTTTTGGGAAGAAGACATCGGTAGAAAGTTGGTTTCTCATCTCCATTCTGTCCTTTTACAAGCTCAAGTCAAAACTTTGATCAAGGAGGAGAATCTGCAGGAGGGAATGGAGCTGGAAGAACACATGCGAGCAATAGCAGCCTCTAAGATTGCAATAATCGTTTTCTCCAAATCATACACTGAATCTACCTGCCGTCTTCTTCAGCTTGAAAAAATCATTGAATGCCACGAAACTTTTGGCCAAATAGTTCTGCCCATATTTTACGAGATTGACCCATTGGATGTACATGATCAGAAGGATGATTGTGGAAAAGCGTTGGAAGAAGCTGCACACAAAAGCTATTCAGGAGACCAACTGGAGCATCCATTGTCCAGGTGGAGCCGTACACTCACCACAGCTGCAGGTATCAGTGGTTGGGATGTCAGAGATTTCAGGCATGATGCTGAACTTGTGGAGCGAATTGTTAGCCGCGTTCAGATATTGCTGGGCTATGCAGACTTGTCTATTACCCGATTTCCTGTTGGATTAAACTCGCACGTGGAAAAGGTGACTGGATGTATTGAAAATCATTCCTCCAAAGTGTGTATGATAGGAATATGGGGAATGGTAGGATCAGGTAAAACTACCATAGCCAAAGCCATCTATAATCGAATTTATCGTCAATTCATTGGTAAGAGTTTTATTGAAAATATTAGACAAGTTTGGGATCAAGTATTTGGAAGGCGTGTTCCTTTGCAGGAAAATCTTCTTTATGATATCCTAAAATTCAAGCCCGGGATGAAAAGTTTTGGGATGGGAAGAACTGTGATCGAGAACGGACTTTCTCGAAAAAAGTTGCTGATTGTGCTTGATGATGTGAATCAGTTTGACCAATTAGAAAATCTATGCGGGAATCGTGAAGGGTTCGGTCAAGGAACTGTGATAATCATTACAACTAGAGATGTTCACGTACTGAACCGACTCAAAGTTGATTATGTTTATAAAATGGATGTTATGAATGAAAATGAGTCCCTTGAGCTCTTTAGTTGGCATGCCTTTAGAGAAGCAAAACCAAGAAAAGACTTTAATGAACTTGCAAGAAGCATAGTTGCTTATTGTGGAGGATTACCACTAGCTCTTAAGGTCCTTGGTTCTTCTTTTTTTGAAGCGAGAATGGAAGAGTGGGAAATTGAACCGTCAAAACTAAAAATAATTCCCATTGATAATGTTCAAGAGGTATTAAAAATAAGTTTTGACGGTTTAAATGACATGGAACAGGATATATTTCTTTATGTGTGTTGTTTCTTTACTGGTAAAGAGAGAGGTTATGTCACAGAGATACTAAATGGTTGTGGACTACATGCTGATATTGGAATAAGAGTTCTCATAGAACGTGGTCTTCTGAAAGTTGAAAGGAACAACAAACTTGAAATGCATCCTTTGTTACGAGACATGGGAAGAGAAATTATTCGTCAAAGTTGGCCAAAGAAACCGGGGAAAAGGAGTGGATTATTTTTTCAGGATGATGTAAAAGATGTACTGAGAGAGAATAATGGGACAGAAGCTACTCAGGGATTGTCCCTGCAACCGCATTCAACCAGAAGAGATCGCTTCCAAGCTCATGCTTTCAAGGAAATGAAGAGATTAAGACTGCTACAACTGGATCATGTACAACTTACTGGAAAATATGGGTACTTTTCTAAACAATTGAGATGGATTTATTGGAGAGGGTTTCCTTCTAAGTACATATCAAATAACTTTCATATGGAAAAAGTAATTGCAATTGATTTAAAACTCGTTTTAAAGTGGCTAAAATTCCTTAATCTTAGTCACTCCAAGTTTTTGAGAGAAACACCTGACTTTTCAGGAATGCCAAGTCTTGAAAATCTCATTCTAAAAGATTGCCCAAGTTTGTGCAAGGTACACCAATCCATTGGAGATCTCCGCAATCTACTACTGATAAATTTGAAAGACTGCACAAGTCTAAGCAATCTCCCCAGAGAGGTATATAAGTTGAAATCTTTAAGAACTTTCATTCTCTCTGGTTGTTTCAAGATTAAAATATTGGAAGAAGATATAGCGCAAATCAAATCCTTGATAACTCTAATTGCTGAAAATACAGCTGTGAAACAAGTGCCCTTTTCGATTGTAAGCTCAAAACGCATTGGATATCTATCCCTACGTGGATTTGAGAGATTGTCAGATAGTATTTTTCCTTCTATCATTCGGTCTTGGATGTCACCAACACTAAATCCCCAATCTTTTGTTAGTCCGTTTTGCATGGATATGGAGAATAATAATTGGCACGACCTTGCGCCACTGCATAGTAGCCTTGCAAATCTTCGAAGTATTTTGGTTCAAGGTGACTCGGAGTTTCAACTATCTAATGAAGTGAAAACAATTCTTGTTGAATACGGTGTAAATTTTACAGAATCAAGAATTTCAAAGCATCACTTGAGGTTTTCTTTGATTGGTGTTGGAAGTTACAATGAATTCCTCAATACTCTCAGCAATAGCGTTTCTGAGGGATTGGCAAGCAGTGAGTCTTGTGATGTTTCTCTTCCAGGTGACAACCATCCTTATTGGTTGGCGAATGTGGGTGAGGGACATTCAGTTTGTTTCAATGTGCCTCAGGATTGTGACATGAAGGGAATGGTTTTGTGTGTTGTTTATTTATCAACCCCTGAAATGGTGGCAACTGAATGTCTTACAAGTGTCTTAGTGGTTAATTACACAAAGTGCACATTACATATGCACAGGCATGGCAGAGTAATTTCCTTCAATGATGAAGATTGGCATGCCATAATGTCAAATTTAGGATCTGGAGACAAGGTGGAGATTTTCGTGACTTTTGGTCATGGATTGGTGGTCAAGAACACAGCTCTCTATTTGATATGTGGTGAATCAAATGACTTGGAAAAAGAACTGTTGAGTAGTTTTTTATAG 3018 0.3867 MEFASSSSSSSSSSSSFLNSEPQFRYDVFINFWEEDIGRKLVSHLHSVLLQAQVKTLIKEENLQEGMELEEHMRAIAASKIAIIVFSKSYTESTCRLLQLEKIIECHETFGQIVLPIFYEIDPLDVHDQKDDCGKALEEAAHKSYSGDQLEHPLSRWSRTLTTAAGISGWDVRDFRHDAELVERIVSRVQILLGYADLSITRFPVGLNSHVEKVTGCIENHSSKVCMIGIWGMVGSGKTTIAKAIYNRIYRQFIGKSFIENIRQVWDQVFGRRVPLQENLLYDILKFKPGMKSFGMGRTVIENGLSRKKLLIVLDDVNQFDQLENLCGNREGFGQGTVIIITTRDVHVLNRLKVDYVYKMDVMNENESLELFSWHAFREAKPRKDFNELARSIVAYCGGLPLALKVLGSSFFEARMEEWEIEPSKLKIIPIDNVQEVLKISFDGLNDMEQDIFLYVCCFFTGKERGYVTEILNGCGLHADIGIRVLIERGLLKVERNNKLEMHPLLRDMGREIIRQSWPKKPGKRSGLFFQDDVKDVLRENNGTEATQGLSLQPHSTRRDRFQAHAFKEMKRLRLLQLDHVQLTGKYGYFSKQLRWIYWRGFPSKYISNNFHMEKVIAIDLKLVLKWLKFLNLSHSKFLRETPDFSGMPSLENLILKDCPSLCKVHQSIGDLRNLLLINLKDCTSLSNLPREVYKLKSLRTFILSGCFKIKILEEDIAQIKSLITLIAENTAVKQVPFSIVSSKRIGYLSLRGFERLSDSIFPSIIRSWMSPTLNPQSFVSPFCMDMENNNWHDLAPLHSSLANLRSILVQGDSEFQLSNEVKTILVEYGVNFTESRISKHHLRFSLIGVGSYNEFLNTLSNSVSEGLASSESCDVSLPGDNHPYWLANVGEGHSVCFNVPQDCDMKGMVLCVVYLSTPEMVATECLTSVLVVNYTKCTLHMHRHGRVISFNDEDWHAIMSNLGSGDKVEIFVTFGHGLVVKNTALYLICGESNDLEKELLSSFL* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0294 1005 ProSiteProfiles TIR domain profile. 24 193 IPR000157 GO:0007165
Pvu10g0294 1005 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 455 IPR027417 -
Pvu10g0294 1005 SMART till_3 25 167 IPR000157 GO:0007165
Pvu10g0294 1005 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 28 988 - -
Pvu10g0294 1005 Pfam NB-ARC domain 209 427 IPR002182 GO:0043531
Pvu10g0294 1005 Pfam TIR domain 26 189 IPR000157 GO:0007165
Pvu10g0294 1005 SUPERFAMILY L domain-like 502 810 - -
Pvu10g0294 1005 Gene3D - 199 357 IPR027417 -
Pvu10g0294 1005 Gene3D Ribonuclease Inhibitor 540 866 IPR032675 -
Pvu10g0294 1005 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 988 IPR044974 GO:0006952
Pvu10g0294 1005 SUPERFAMILY Toll/Interleukin receptor TIR domain 20 170 IPR035897 -
Pvu10g0294 1005 PRINTS Disease resistance protein signature 227 242 - -
Pvu10g0294 1005 PRINTS Disease resistance protein signature 304 318 - -
Pvu10g0294 1005 PRINTS Disease resistance protein signature 397 411 - -
Pvu10g0294 1005 PRINTS Disease resistance protein signature 670 686 - -
Pvu10g0294 1005 Gene3D - 362 446 IPR042197 -
Pvu10g0294 1005 Gene3D - 19 194 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0294 Pvu-Chr10 4103114 4106897 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0294 19 760 WRKY Transcription Factor Family AT4G12020 28.215 7.09e-71 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0294 - - pvu:PHAVU_010G027900g 1580.46