Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0292 ATGGAGCTGGAAGAACACATGCGAGCAATAGCAGCCTCTAAGATTGCAATAATCGTTTTCTCCAAATCATACCCTTTATCTACCTGCTGTCTTCTTCAGCTTGAAAAAATCATTGAATGCCACGAAACTTTTGGTCAAATATTTCTACCCATATTTTACGAGATTGACCCATTGGATGTACGTTATCAGAAGGATGATTTCGGAAAAGCGTTGGAAGAAGCTGCACACAAAAGCTATTCTGGAGAGCAAATGGAGCATGCATTGTCCAGATGGAGCCGTGCACTCACCACAGCTGCAGGTATCAGTGGTTTGGATGTCAGAGATTTCAGGCATGATGCTGAACTTGTGGAGAAAGTTGTTTTCCGCATTCTTGAATTGCTGGACTATGAAGACTTGTCTAATACCCAATTTCCTGTTGGATTAGACACCCGCGTGGAAAAGGTAATTGAATGTATTGAAAATCATTCCACCAAAGTCTGTATGATAGGAATATGGGGAATGGCAGGATCGGGTAAAACTACCATAGCCAAAGCCATCTATAATCGAATTTATCGTCCATTCATCGGTAAGAGTTTTATAAATATTAGACAAGTTTGGGATCGAGTAGATAGAAGGCATGTTGATTTGCAAGAAAATCTTCTTTATGGTGTCCTTAAATCCAAGCCTGAGGTGAAAAGCGTTGGGATGGGAAGAACTATGATCGAGAATGGACTTTCTCAAAAAAAGTTGCTGATTGTGCTTGATGATGTGAATGGGTTTGAACAATTAGAAAACCTATGCGGGAATCGTGAATGGTTCGGTCAAGGAACTGTGATAATCATTACAACTAGAGATGTTCACGTACTGAGCCGACTCAAAGTTGATTATGTTTATAAAATAGATGTTATGAATGAAAATGAGTCCCTTGAGCTCTTTAGTTGGCATGCCTTTAGAAAAGCAAAACCAAGAAAACAGTTTAATGAACTTGCAAGAAACACGGTTGCTTATTGTAGAGGACTACCACTAGCTCTCGAGGTCCTTGGTTCCTTTTTATGTGATAAGACAATGGAAGAGTGGGAAAGAGTATTGCCAAAAGCAAAAGTAATTCCCAAGCTTCAAGTTCAGAAAATATTGAGATTAAATTTTGACGGTTTGTGCGATGACATGGAAAAGGATATATTTCTTGATGTATGTTGTTTCTTTATTGGTAAAGATAGAGGCTATGTGACAGAGATACTAAATGGATGTGGACTGCATGCTGATATTGGAATAAGAGTTCTCATAGAGCGTGGTCTCATAAAAGTTGAAGGGAACAACAAACTTCAAATGCATCCTTTGTTACGAGAAATGGGAAGAGAAATTATTCGTCAAAGTTGCCCAAACGAACCAGAGAAAAGGAGTCGATTATGGTTTCAGGATGATGTACAAGATGTACTGAAAAAGAATACTGGGACAGAAGCTACCCAGGGATTGTCCCTGAAACTACATTTAACCAGCAGAGATTGCTTCAAAGCTCGTGCTTTCAAGAAAATGAAGAGATTAAGACTGCTACAACTGGATCATGTACAACTTACTGGAGATTATGGGTACATTTCTAAACAATTGAGATGGATTTCTTGGCAAGGGTTTCGTTTTGAGTACGTACCAAATAACTTTCATATGGAAAATGTAATTGCAATTGATTTAAAACATAGTCATCTTCAACTCGTCTGGAAACAACCCCAGGTTGTAAAGTGGTTAAAATTCCTTAATCTTAGTCACTCCAAGTTTTTGAGAGAAACACCTGACTTTTCAGGACTACCAAGTCTTGAAAAGCTCATTCTAAAAGATTGCCCAAGTTTGTGCAAGGTACACCAATCCATTGGAGATCTCCGCAATCTACTACTGATAAATTTGAAAGACTGCACAAGTCTAAGCAATCTTCCCAGAGAGGTATATAAGTTGAAATCTTTAAGAACTTTCATTCTTTCTGGTTGTTTCAAGATTGACATATTGGAAGAAGATATAGCGCAGATCAAATCCTTGATAACTCTAGTAGCTGAAAATACAGCTGTGAAACAAGTGCCCTTTTCAATTGTAATCTCAAAAAGCATTGGATATATATCCCTACGTGGATTTGAAGGATTGTCAACTAGTATTTTTCCTTCTATCATTCGGTCTTGGATGTCACCAACACTGAATCCCCAATCTTTTGTTAGTCCGTTTTGCATGGATATGGAGAATAATAATTGGCGTGACCTTGCACCATTTCATAGCAGCCTTGCAAATCTTCGCAGTATTTTGGTTCAAGGTGACACGGAGTTTCAGCTATCTAATGAAGTGAAAACAATTGTTGTTGAATACGGTGTAAATGTTACAGAATCAAGAATTTCAAAGCATCACTTGAGGTTTTCTTTGATTGGTGTTGGAAGTTACAATGAATTCCTCAATACTCTCAGCAATAGCGTTTCTGAGGGGTTGGCAAGCAGGGAGTCTTGTGATATTTCTCTTCCAGGTGACAACCATCCTTATTGGTTGGCGAATGTGGGTGAGGGACATTCAGTTTGTTTCAATGTGCCTCAGGATTGTGAACTGAAGGGAATGGTTTTGTGTGTTGTTTATTTATCAACCCCTGAAATCGTGGCAACTGAATGTCTTACAAGTGTCTTAGTGGTTAATTACACAAAGTGCACATTACATATGCACAGGCATGGCAGAGTAATTTCCTTCAATGATGAAGATTGGCATGCCATAATGTCAAATTTAGGATCCGGAGACAAGGTGGAGATTTTCATGACTTTTGGGGATGGATTGCTGGTCAAGAACACAGCTCTCTATTTGATATGTGGTGAATCAAATGACTTGGAAAAAGAACCTGTTGAGTAG 2844 0.3868 MELEEHMRAIAASKIAIIVFSKSYPLSTCCLLQLEKIIECHETFGQIFLPIFYEIDPLDVRYQKDDFGKALEEAAHKSYSGEQMEHALSRWSRALTTAAGISGLDVRDFRHDAELVEKVVFRILELLDYEDLSNTQFPVGLDTRVEKVIECIENHSTKVCMIGIWGMAGSGKTTIAKAIYNRIYRPFIGKSFINIRQVWDRVDRRHVDLQENLLYGVLKSKPEVKSVGMGRTMIENGLSQKKLLIVLDDVNGFEQLENLCGNREWFGQGTVIIITTRDVHVLSRLKVDYVYKIDVMNENESLELFSWHAFRKAKPRKQFNELARNTVAYCRGLPLALEVLGSFLCDKTMEEWERVLPKAKVIPKLQVQKILRLNFDGLCDDMEKDIFLDVCCFFIGKDRGYVTEILNGCGLHADIGIRVLIERGLIKVEGNNKLQMHPLLREMGREIIRQSCPNEPEKRSRLWFQDDVQDVLKKNTGTEATQGLSLKLHLTSRDCFKARAFKKMKRLRLLQLDHVQLTGDYGYISKQLRWISWQGFRFEYVPNNFHMENVIAIDLKHSHLQLVWKQPQVVKWLKFLNLSHSKFLRETPDFSGLPSLEKLILKDCPSLCKVHQSIGDLRNLLLINLKDCTSLSNLPREVYKLKSLRTFILSGCFKIDILEEDIAQIKSLITLVAENTAVKQVPFSIVISKSIGYISLRGFEGLSTSIFPSIIRSWMSPTLNPQSFVSPFCMDMENNNWRDLAPFHSSLANLRSILVQGDTEFQLSNEVKTIVVEYGVNVTESRISKHHLRFSLIGVGSYNEFLNTLSNSVSEGLASRESCDISLPGDNHPYWLANVGEGHSVCFNVPQDCELKGMVLCVVYLSTPEIVATECLTSVLVVNYTKCTLHMHRHGRVISFNDEDWHAIMSNLGSGDKVEIFMTFGDGLLVKNTALYLICGESNDLEKEPVE* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0292 947 Gene3D - 295 379 IPR042197 -
Pvu10g0292 947 Gene3D - 2 129 IPR035897 -
Pvu10g0292 947 ProSiteProfiles TIR domain profile. 1 127 IPR000157 GO:0007165
Pvu10g0292 947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 389 IPR027417 -
Pvu10g0292 947 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 103 IPR035897 -
Pvu10g0292 947 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 933 IPR044974 GO:0006952
Pvu10g0292 947 PRINTS Disease resistance protein signature 161 176 - -
Pvu10g0292 947 PRINTS Disease resistance protein signature 237 251 - -
Pvu10g0292 947 PRINTS Disease resistance protein signature 330 344 - -
Pvu10g0292 947 PRINTS Disease resistance protein signature 615 631 - -
Pvu10g0292 947 Pfam TIR domain 8 126 IPR000157 GO:0007165
Pvu10g0292 947 Gene3D Ribonuclease Inhibitor 484 773 IPR032675 -
Pvu10g0292 947 Gene3D - 130 290 IPR027417 -
Pvu10g0292 947 Pfam NB-ARC domain 143 357 IPR002182 GO:0043531
Pvu10g0292 947 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 8 933 - -
Pvu10g0292 947 SUPERFAMILY L domain-like 449 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0292 Pvu-Chr10 4080585 4084830 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0292 9 707 WRKY Transcription Factor Family AT4G12020 29.640 5.92e-78 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0292 - - pvu:PHAVU_010G027900g 1912.5