Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0289 ATGGGTGATTTTGGAAAAGCCCTCAAAGCAACTGCACAACAAACATTCTCACCACAACAACTGGAGCATGGCATGTCCAGGTGGAGCCACGCACTCACCAAAACTGCAAATTTCTTTGGATGGGATGAGAACAATCACAGGAGTGATGCAGAACTAGTGGACAAAATTGTTAAGATCGTTCTTAATTTATCAATCTTGTCTGCTACTAAATTTCCAGTTGGATTACAATCCCGTGTGGAGGATGTGATTCAAACCATAAAAAGTAAATCCACCCAAGTTTTTACGATAGCGATATGTGGAATAGGAGGATCGGGTAAAAGCACCCTTGCCAAAGCCATCTATAATCAAATTCATGGTACATTCACGGAGAAAAGTTTCATTGAAGATATTGGACAATTTAGTGGAATAAGAGGGGATCTTCGTTTACAAGAACAACTTCTTTCAGATGTCCTAAAAACGAAGGTGAAGATAAGCAGTGTTGAGATGGGAAAAAAAATGATTCGGGAAAGACTTTCTGGGAAAAGAGTGTTCATTGTACTTGACGATGTGAATGAGTATGGTCCATTAGACCTATGGGGAAGTAGTTCATGGTTAGGTGAAGGAACTGTAATAATCATTACAGCGAGAGATGAAGACCTACCGAATATGCTTCGAGTTGATTATGTTTATCCGATGATTATGATGAACGCAAACGAGTCCGTTGAGCTTCTTAGTTGGCACGCATTTAGAGAACCAAAACCAAAAAAAGAATACTATTTACTTGCAAAAAGAGTAGTTGCTTATTGTGGATCACTACCTCTAGCTCTTGAAGTCATTGGAACTTATTTATATAAAAGGACGAAAGAAGAATGGAATACAGTATTGATAAGATTAAACAATATTCCCCATAATGAAGTTCCACAGATATTGAAAATAAGCTTCGACGGTTTACGTAATCAAATAGAGAAAGATTTATTCCTTGATGTATGTTGTTTCTTTGTTGGTAAAAGCAGAGCCTATGTTACCAAGATCCTAAATGGCTGTGGAGTAGACCATGATAGTGGAATAAGAGTTCTCATAAAGCGTAACCTCATCAAAGTTAAAGAAAACAACAAATTTGGAATGCATCATTTGCTAAGAGAAATGGGAAGAGAAATGATTCGTGAAATTTCAGGAAAGGAATCTGGAAAGAACAGTCGACTGTGGCTTGAGGAGGATCTAAAACATGCATTGTCAGAGAACACTCTCTTTTCATCACCGGGCACAAAAGTCATTCAGAGATTGTCTAGCGGAAGAGATTTCTTCGAACGTTATCCTGTAGAGGTAAGAGACCCATCAAAACTGCTTAAACTCGCTGGAGATTCTGAGTACCCTTCTAAGAAACTGAGAGGGATCAGTCTGCAAAGGTTTTCTTCAGAATACTTACCTAACGACTTTAATCTGCATGATGCAATAGCGATTGATTTAAAACACAGTCTTCTTCGATTCGTCTGGAAAGAAACCCAGGTTTTGGCTTGTCTAAAAGTCTTGAATCTTAGTCACTCGAAGTACTTGACAAAAACCCCTGACTTTTCGAGACTACCAAGTCTTGAACACCTCATTCTCAAAGATTGTCCTAGATTGCGCGAAGTACACCAATCTATTGGTTGTCTCTGCAATCTTATACTACTAAATTTGAAGGACTGTACAAGTCTAAGCACTCTCCCCAGTGAGATATGTAAGTTGAAATCCTTGAAAAATCTCATTATATCTGGTTGTTTGAAAATTGACCTATTGGAAAAAGATATAGTGCAAATGGAATCCTTGAGAACTCAAATTTCTGAAAATACAGATGTGAAACAAGTGCCTTTTTCAATTGTATGCTCAAAAAGCTTTGCATATTTATTCCTACCTAGATTTGAAGGATTATCACATAATCTTTTTCCTTCTGTGATTCGGTCTCTGATGTCGCCAACAATGAATCCCTTATCTTATATTCATTCCTTCATGGATATGGAGGATAATAGTTGGGATGATATTTCACCATTGCTTGGCAGCCTTACAAATCTTCGAAGTGTTTTGGTGCAATGTGACGCCAAGTTTGAACTATATGAGCAAGTAAAAACTATATTGGTCGAATATGATGCAAATATTACAGAATCAGGAATTTCAAAGCATAAGTTCAGGTCTTCTCTGACTGGCGTTGGAAGATACAAAGAATTCTTCAATACTATCAGCGATAGCATACCTAAGGTATTTGCAAGCAGTGAGTCATGTGATGTTTCTCTGCCAGGTGACAACGATCCTTATTGGTTGGCCCATATGGGTGATGGACATTCTGTTTCTTTCACTGTGCCTCAAGATCGTGAGGTGAAGGGAATGGCTTTGTGTGTCGTTTATTCATCAACCTCCGAAATCATTGAACCTAAACATACTACTGTCTTAATTGTTAATTACACGAAGTGCACATGCCAGATACACAACCATGGCACAGTAATTTCCTTTAATGATGAAGATTGGCATGACATAATGTCAAATTTAGGATCAGGAGACAAGGTGGAGATTTTTGTGACTTTTGGTCAGGATTTGGTGATTAAGAGCACAGCTGTCTACCTGATATATGGTGAGCCAAGGAAAAATTCCCTCATTAGATTCATAAAGAAAATTGTAATGTGA 2634 0.3797 MGDFGKALKATAQQTFSPQQLEHGMSRWSHALTKTANFFGWDENNHRSDAELVDKIVKIVLNLSILSATKFPVGLQSRVEDVIQTIKSKSTQVFTIAICGIGGSGKSTLAKAIYNQIHGTFTEKSFIEDIGQFSGIRGDLRLQEQLLSDVLKTKVKISSVEMGKKMIRERLSGKRVFIVLDDVNEYGPLDLWGSSSWLGEGTVIIITARDEDLPNMLRVDYVYPMIMMNANESVELLSWHAFREPKPKKEYYLLAKRVVAYCGSLPLALEVIGTYLYKRTKEEWNTVLIRLNNIPHNEVPQILKISFDGLRNQIEKDLFLDVCCFFVGKSRAYVTKILNGCGVDHDSGIRVLIKRNLIKVKENNKFGMHHLLREMGREMIREISGKESGKNSRLWLEEDLKHALSENTLFSSPGTKVIQRLSSGRDFFERYPVEVRDPSKLLKLAGDSEYPSKKLRGISLQRFSSEYLPNDFNLHDAIAIDLKHSLLRFVWKETQVLACLKVLNLSHSKYLTKTPDFSRLPSLEHLILKDCPRLREVHQSIGCLCNLILLNLKDCTSLSTLPSEICKLKSLKNLIISGCLKIDLLEKDIVQMESLRTQISENTDVKQVPFSIVCSKSFAYLFLPRFEGLSHNLFPSVIRSLMSPTMNPLSYIHSFMDMEDNSWDDISPLLGSLTNLRSVLVQCDAKFELYEQVKTILVEYDANITESGISKHKFRSSLTGVGRYKEFFNTISDSIPKVFASSESCDVSLPGDNDPYWLAHMGDGHSVSFTVPQDREVKGMALCVVYSSTSEIIEPKHTTVLIVNYTKCTCQIHNHGTVISFNDEDWHDIMSNLGSGDKVEIFVTFGQDLVIKSTAVYLIYGEPRKNSLIRFIKKIVM* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0289 877 Gene3D - 227 311 IPR042197 -
Pvu10g0289 877 SUPERFAMILY L domain-like 451 681 - -
Pvu10g0289 877 SMART AAA_5 92 232 IPR003593 -
Pvu10g0289 877 Gene3D - 60 222 IPR027417 -
Pvu10g0289 877 PRINTS Disease resistance protein signature 95 110 - -
Pvu10g0289 877 PRINTS Disease resistance protein signature 170 184 - -
Pvu10g0289 877 PRINTS Disease resistance protein signature 262 276 - -
Pvu10g0289 877 PRINTS Disease resistance protein signature 495 511 - -
Pvu10g0289 877 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 2 858 - -
Pvu10g0289 877 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 321 IPR027417 -
Pvu10g0289 877 Coils Coil 582 602 - -
Pvu10g0289 877 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 858 IPR044974 GO:0006952
Pvu10g0289 877 Gene3D - 1 59 IPR035897 -
Pvu10g0289 877 SUPERFAMILY "Winged helix" DNA-binding domain 298 404 IPR036390 -
Pvu10g0289 877 Pfam NB-ARC domain 77 297 IPR002182 GO:0043531
Pvu10g0289 877 Gene3D Ribonuclease Inhibitor 437 603 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0289 Pvu-Chr10 4069147 4073022 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0289 27 582 WRKY Transcription Factor Family AT4G12020 28.257 6.21e-56 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0289 - - pvu:PHAVU_010G0291001 1182.16