Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0285 ATGACCTCATCAATTCCTTCCATGGAATTGGCCTCCTCAACATCCAAACTCCCACGGATGTACGATGTACTCATCAACTTTACTGGAGAAGACATCCAAAGGAAATTTGTGTCTCATCTCAATTCTGCCCTCTCTGCTGTTGGCTTCACCACTTTCCTTCACCACCCCAATGCACACAACCCAATTCACATCCAACAACCTATTCTCAATCTCTCTCGTGTAGCAATTGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCACCAGCTTCAACAAATCATTAGATGGAAAGAAACTTATTGTCGACATGTTCTGCCCGTTTATTACGAAATTGAGCCATCTGATGTACGTCTTCAGAAGGGTGATTTTGGAAAAGCCTTGAAAGAAACTGCACACCAAACATTTTCAGGACAACAACTGGAACATGCCATGTCCAAATGGAGCCACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAACTAGTGGACAAAATTGTTAAGACCGTTCTTAATTTACCAGTGTTGTCTGCTACTAAATTTCCAGTTGGATTACAATACCAAGTGGAGGATCTGATTGGAACTATCAAAAGTAAATCCACGGAAGTTTGTAGGATAGCGATATGTGGACAGGGAGGATCTGGTAAAACCACCCTTGCTAAAGCCATCTACCATCAAATTCATGATACATTCACGGAGAAAAGTTTCATTGAAGATATTGGACAAGTTATCGGAATAAGAGGGGATCTTGGTTTACTAGAACAACTCCTTTCAGATGTCCTAAAAACAAAGGTAGAGATAGATAGCTTTGAGATGGGAAGACGTATGATTCGGGAAAGACTTTCTGGGAAAAGGGTGCTCATTGTACTTGACGATGTGCCTCCGTTTGATGCCACATTACTATGGGAATGCCGTCATTGGTATGGAAGAGGAAGTGTAATAATCATTACAACAACACCTGAAAAACTACCGATGATATATCAAACTGATTCTATTTTTCAGGTAGAGCTAATGAACTCAGATGAATCCCTTGAGCTTCTTAGTTGGCACGCATTTAAAGAAGCAAAACCAAAAGAAGATTATCGTTTCCTAGCAGAAAGAGTAGTTGCTTATTGTGGAGGACTACCTCTAGCTCTTGAAGTCATTGAAAGTTATTTATATGAAAGGACGAAAGAAGAATGGAATAGAGTACTCTTAAAATTAAAGAAAATTCCCGACCGTAAATTTGACCAGATATTGAAAATAAGCTTCGACGGTTTATGCAATCAAATGGAAAAAAAATTATTCCTTGATTTATGTTGTTCCTTTGTTGGTAAAGGCAGAGCGTATGTTACCAAGATCCTAAATGGCTGTGGAATAGACCCTGATAGTGAAATAAGAGTTCTGACAGAGCGTAGTCTTATACGAGTTAATAAGAACAACAAATTAGGAATGCATCCGTTGCTACGACAAATGGGAAGAGAAATTATTCGTCAAATTTCAAGAAAGGAAACTGGGAAGAACAGTCAACTGTGTTTTGATAAGGATGCAGAATATGTACTGTCAGAGAATACGCTCTTCTCATCTAAGGGGACAAAAGTGATTCAGAGATTGCCTATCGGAAGTGATTTCTTGGAACGTTATTCTTTAGAGGCAAGAGACGCATCAAGACGGCTGGAATTCGCTGGACATTCCGAGTACCATTCTAAGAAACTGAGATGGATCAGTATGCAAGGGTTTTCTTCAGAATACCTACCTAACGACTTTTATCTGCATGATGCAATAGTGATTGATTTAAAACACAGTCTTCTTCGATTCGTTTGGAAAGAACCCCAGGTTTTGGCGTGGCTAAAAGTCCTTAATCTTAGTCACTCAAAGTACTTAAAAGAAACCCCTGACTTTTCCGGACTACCAAGTCTTGAACAGCTTATTCTCAAAGATTGTCCAAGATTGCGTGAAGTACACCAATCTATTGGATGTCTCTGCAATCTTATACTGCTAAATTTGAAGGATTGTACAAGTCTGAGCAATCTCCCCGAAGAGATATATAAGCTGAAATGTTTAAAAACTCTGATTCTATCTGGTTGTTCGAAGATGGACCTAATGGAAAACGATAGAGTGCGAATGAAATCCTTGATAACTATAATTGCTGAAAATACAGTTATGAAACAATTGCCTTTTACAATTGTAAGCCGAAAAAGCATTGGATATATATCCCTACGTGGATTTGAGGAATCGTCACATAATCTTTTTCCTTCTATCATTCGGTCTCGGATGTCGCCAACAACGAATCCCCTATCTTATATTCATTCCTTCATGCATACGGAAGATAATAGTTGGGATGATATTGCACCATTGCTTAGCAGCCTCGCAAATCTTCGAAGTGTTTTGGTGCAATGTGACGCCGAGTTTCAACTATCTAAGCAAGTAAAAACCATACTGGCCGAATATGGTGCAAATATTACAGAATCAGTAATTTCAAAGCATCACCTCAGGTATTTTCTGACTGGTGTTGGAAGATACAAACAATTCTTCAATACTGGGAGCAGTAGCATACCTAAGATATTTGAAAGCAGTGAGTTATGTGATGCTTATCTCCCAGGTGACAATGATCCTTATTGGTTGGCCCATATGGGTGAGGGACATTCTGTTTCTTTCACTGTGCCTCAAGATCGTGTCGTGAAGGGAATGGCTTTGTGTGTGGTTTATTTATCAACCTCTGAAATCATTGAACCTGCACTTAGTACTGTCTTAATTGTTAATTACACAAAGTGCACATGCCAGATACACAACCATGGCACAGTAATTTCCTTCAACAACGAAGATTGGGCTGACATAATGTCAAATTTAGGATCAAAAGACAAGGTGGAGATTTTTGTGAGTTTTGGTAATGAATTGGTAGTCAAGAACACAGCTGTCTATCTAATATGTAGTGAATCGAATGACTTAGAAAAGGAGCCTGTGCCAAAGAAAAAAATCTTTTATTAG 3003 0.3903 MTSSIPSMELASSTSKLPRMYDVLINFTGEDIQRKFVSHLNSALSAVGFTTFLHHPNAHNPIHIQQPILNLSRVAIVVFTKTYSQSAWCLHQLQQIIRWKETYCRHVLPVYYEIEPSDVRLQKGDFGKALKETAHQTFSGQQLEHAMSKWSHALTKAANFFGWDESNYRSDAELVDKIVKTVLNLPVLSATKFPVGLQYQVEDLIGTIKSKSTEVCRIAICGQGGSGKTTLAKAIYHQIHDTFTEKSFIEDIGQVIGIRGDLGLLEQLLSDVLKTKVEIDSFEMGRRMIRERLSGKRVLIVLDDVPPFDATLLWECRHWYGRGSVIIITTTPEKLPMIYQTDSIFQVELMNSDESLELLSWHAFKEAKPKEDYRFLAERVVAYCGGLPLALEVIESYLYERTKEEWNRVLLKLKKIPDRKFDQILKISFDGLCNQMEKKLFLDLCCSFVGKGRAYVTKILNGCGIDPDSEIRVLTERSLIRVNKNNKLGMHPLLRQMGREIIRQISRKETGKNSQLCFDKDAEYVLSENTLFSSKGTKVIQRLPIGSDFLERYSLEARDASRRLEFAGHSEYHSKKLRWISMQGFSSEYLPNDFYLHDAIVIDLKHSLLRFVWKEPQVLAWLKVLNLSHSKYLKETPDFSGLPSLEQLILKDCPRLREVHQSIGCLCNLILLNLKDCTSLSNLPEEIYKLKCLKTLILSGCSKMDLMENDRVRMKSLITIIAENTVMKQLPFTIVSRKSIGYISLRGFEESSHNLFPSIIRSRMSPTTNPLSYIHSFMHTEDNSWDDIAPLLSSLANLRSVLVQCDAEFQLSKQVKTILAEYGANITESVISKHHLRYFLTGVGRYKQFFNTGSSSIPKIFESSELCDAYLPGDNDPYWLAHMGEGHSVSFTVPQDRVVKGMALCVVYLSTSEIIEPALSTVLIVNYTKCTCQIHNHGTVISFNNEDWADIMSNLGSKDKVEIFVSFGNELVVKNTAVYLICSESNDLEKEPVPKKKIFY* 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0285 1000 PRINTS Disease resistance protein signature 217 232 - -
Pvu10g0285 1000 PRINTS Disease resistance protein signature 292 306 - -
Pvu10g0285 1000 PRINTS Disease resistance protein signature 384 398 - -
Pvu10g0285 1000 PRINTS Disease resistance protein signature 688 704 - -
Pvu10g0285 1000 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 981 IPR044974 GO:0006952
Pvu10g0285 1000 Gene3D - 14 182 IPR035897 -
Pvu10g0285 1000 Gene3D - 183 342 IPR027417 -
Pvu10g0285 1000 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 24 981 - -
Pvu10g0285 1000 Gene3D Ribonuclease Inhibitor 569 713 IPR032675 -
Pvu10g0285 1000 Pfam NB-ARC domain 198 415 IPR002182 GO:0043531
Pvu10g0285 1000 Gene3D - 350 433 IPR042197 -
Pvu10g0285 1000 SUPERFAMILY L domain-like 571 758 - -
Pvu10g0285 1000 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 444 IPR027417 -
Pvu10g0285 1000 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 163 IPR035897 -
Pvu10g0285 1000 SUPERFAMILY "Winged helix" DNA-binding domain 420 507 IPR036390 -
Pvu10g0285 1000 Pfam TIR domain 21 183 IPR000157 GO:0007165
Pvu10g0285 1000 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Pvu10g0285 1000 SMART till_3 20 160 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0285 Pvu-Chr10 4019402 4023362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0285 21 769 WRKY Transcription Factor Family AT4G12020 26.761 9.08e-58 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0285 - - vun:114165123 1321.99