Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0282 ATGGAATTGGCCTCTTCAACATCCAAACTCCCACGGATGTACGATGTACTCATCAACTTTAGTGGAGAAGACATCCAAAGGAAGTTTGTGTCTCATCTCGATTCTGCCCTCTCTGCTGTTGGCTTCACCACTTTCCTTCACCACCCCAATGCACTCAACCAAACGCACATCCAACAACCTATTCTCAATCTCTCTCGTGTAGCTATTGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAGCTTCAACAAATCATTAGATGGCAAGAAACTTATTGTCGACATCTTCTGCCCGTTTATTACGAAATTCAGCCATCTGATGTGCGTCTTCAGATGGGTGATTTTGGAAAAGCCTTCAAAGCAACTGCACACCAAACATTTTCAGGACAACAACTGGCACATGCCATGTCCAAATGGAGCCACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAACTGGTGGACAAAATTGTTAAGACCGTTCTTAATTTACCAGTCTTGTCTGCTACTAAATTTCCAGTTGGATTACAATCGCGCATGGAGGATCTTACTCGAGCTATCAAAAATAAATCCACGGAAGTTTGTAGGATAGCAATATGTGGACAGGGAGGATCTGGTAAAATCACCCTTGCTAAAGCCATCTACCATCAAATTCATGGTACATTCACGGAGAAAAGTTTCATTGAAGAAATTAGACAAATTAGCGGAATAAAAGGGGGTCTTCGTTTACTAGAACAAATCCTTTCAGATGTCCTAAAAACGAAGGTAGAGATAGATAGCTTTGAGATGGGAAGACGAATGATTGAGGAAAGACTTTCTGGGAAAAGGGTGCTCATTGTACTTGACGATGTGCCTCCGTTTGATGCCACATTACTATGGGAATGCCGTCATTGGTATGGAGGAGGAAGTGTAATAATCATTACAACAACACATGAAAACCTACTGATGATATCTCAAGCTGATTCTATTTTTCAGGTAGAGCTAATGAACACAGATGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAGAAGATTATCTTTTCCTTGCAGAAAGAGTAGTTGCTTATTGTGGAGGACTACCTCTAGCTCTTGAAGTCATTGGAAGTTATTTATATGAAAGGACGAAACGAGAATGGAATAGAGTACTCTTACAACTAAAGAAAATTCCCGAGCTTATTAAATTTGATCAGATACTGAAAATAAGCTTCGACGGTTTATGCAATCAAATGGAAAAAGATTTATTCCTTGATCTATGTTGTTCCTTTGTTGGTAAAGGCAGAGCCTATGTTACGAAGATCCTAAATGGCTGTGGAATAGAGGCTGATAGTGGAATAAGAGTTCTGATAGAGCGTAGTCTCATACGAGTTAATAAGAACAACAAATTAGGAATGCATTCGTTACTACGACAAATGGGAAGAAAAATTATTGGTGAAATCATTGATGAGGATATGAAGCTTGCTATTCTCTTTTCATCACCGGGGACAAGAGTCATTCAGGGTTGGCCTTCCACAAGAGATTCTCCTGTAGGTGTAAGAGACTCATCAAGACTTCTGAAACTGGCTGCAGATTCTAAGTTCCTTTCTGCGAAATTAAGATGGATCAGTTTGCGAGGGTTTTCTTCAGAATACCTACCTAACCACTTTTATTTGCATGATGCAATAGTGATTGATTTAAAACACAGTTTTCTTCGATTGGTTTGGAAAGAACCCCAGGTTTTGACGTGGCTGAAAGTCCTTAATCTTAGTCACTCCAAGTACTTGATAGAAACCCCTGACTTTTCGGGACTACCAAGTCTTGAACAGCTCATTCTCGAAGATTGTCCAAGATTGCGCGAAGTACACCAATCTATTGGTTGTCTCTCCAATCTTATACTGCTAAATTTGAAGGACTGTACAAGTCTAAGCAATCTTCCTGGAGAGATATATAAGCTGAAATGTTTAAAAACTCTGATTCTATCTGGTTGTTCGAAGATTGACCTAATGGATATAGATATAGTGGGAATGAAATCCTTCATGACTACAATTGCTGAAAATACAGCTATGAAACAACTGCCTTTTACAATTGTAAGCCCCAAAAGCATTGGATATATATCCCTACGTGGATTAGAGGGATTGTCACATAATCTTTTTCCTTTTATCATTCGGTCTCGGATGTCGCCAACAATGAATCCCGTATCTTATATTCATTCCTTCATGCATATGGAAGATAATAATTGGGATGATATATCACCATTGCTTAGCAGCCTCGAAAATCTTCGAAGCGTTTCAGTGTAA 2334 0.3955 MELASSTSKLPRMYDVLINFSGEDIQRKFVSHLDSALSAVGFTTFLHHPNALNQTHIQQPILNLSRVAIVVFTKTYSQSAWCLHQLQQIIRWQETYCRHLLPVYYEIQPSDVRLQMGDFGKAFKATAHQTFSGQQLAHAMSKWSHALTKAANFFGWDESNYRSDAELVDKIVKTVLNLPVLSATKFPVGLQSRMEDLTRAIKNKSTEVCRIAICGQGGSGKITLAKAIYHQIHGTFTEKSFIEEIRQISGIKGGLRLLEQILSDVLKTKVEIDSFEMGRRMIEERLSGKRVLIVLDDVPPFDATLLWECRHWYGGGSVIIITTTHENLLMISQADSIFQVELMNTDESLELLSWHAFREAKPKEDYLFLAERVVAYCGGLPLALEVIGSYLYERTKREWNRVLLQLKKIPELIKFDQILKISFDGLCNQMEKDLFLDLCCSFVGKGRAYVTKILNGCGIEADSGIRVLIERSLIRVNKNNKLGMHSLLRQMGRKIIGEIIDEDMKLAILFSSPGTRVIQGWPSTRDSPVGVRDSSRLLKLAADSKFLSAKLRWISLRGFSSEYLPNHFYLHDAIVIDLKHSFLRLVWKEPQVLTWLKVLNLSHSKYLIETPDFSGLPSLEQLILEDCPRLREVHQSIGCLSNLILLNLKDCTSLSNLPGEIYKLKCLKTLILSGCSKIDLMDIDIVGMKSFMTTIAENTAMKQLPFTIVSPKSIGYISLRGLEGLSHNLFPFIIRSRMSPTMNPVSYIHSFMHMEDNNWDDISPLLSSLENLRSVSV* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0282 777 SUPERFAMILY L domain-like 533 773 - -
Pvu10g0282 777 SUPERFAMILY "Winged helix" DNA-binding domain 416 496 IPR036390 -
Pvu10g0282 777 Pfam TIR domain 14 182 IPR000157 GO:0007165
Pvu10g0282 777 Gene3D - 11 173 IPR035897 -
Pvu10g0282 777 Gene3D Ribonuclease Inhibitor 535 688 IPR032675 -
Pvu10g0282 777 Gene3D - 174 338 IPR027417 -
Pvu10g0282 777 PRINTS Disease resistance protein signature 210 225 - -
Pvu10g0282 777 PRINTS Disease resistance protein signature 285 299 - -
Pvu10g0282 777 PRINTS Disease resistance protein signature 377 391 - -
Pvu10g0282 777 PRINTS Disease resistance protein signature 662 678 - -
Pvu10g0282 777 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 501 IPR044974 GO:0006952
Pvu10g0282 777 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 539 728 IPR044974 GO:0006952
Pvu10g0282 777 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Pvu10g0282 777 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Pvu10g0282 777 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 501 - -
Pvu10g0282 777 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 539 728 - -
Pvu10g0282 777 Gene3D - 343 427 IPR042197 -
Pvu10g0282 777 SMART till_3 13 153 IPR000157 GO:0007165
Pvu10g0282 777 Pfam NB-ARC domain 201 408 IPR002182 GO:0043531
Pvu10g0282 777 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 438 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0282 Pvu-Chr10 3961261 3963877 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0282 593 708 WRKY Transcription Factor Family AT4G12020 36.207 1.24e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0282 - - vun:114165123 1059.28