Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0278 ATGGCATTGGCTTCTTCAACATCCAAACTTCCACGGATGTACGATGTGCTCATCAACTTTAATGGAGAAGACATCCAAAGGAGATTTGTTTCTCATCTCGATTCTGCCCTCTCTGCTGTTGGCTTCACCACTTTCCTTCACCACCCCAATGCACTCAACCCAATTCACATCCAACAACCTATTCTCAATCTCTCTCATGTAGCAATTGTTGTTTTCACCAAATCCTATTCTCAATCTTCTTGGTGTCTTCATCAACTCCAACAAATCATTAAATGGCACCAAACTTATTGCCGACACGTTCTGCCTGTTTATTACGAAATTGAGCCATCTGATGTACGTCTTCAAAAGGGTGATTTTGGAAAAGCCTTCAAAGCAACTGCAGAACAAACATTCTCAGGACAACAACTGGAGCATGGCATGTCCAGGTGGAGCCACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAGAAATCACAGGAATGATGCTGAACTAGTGGAAAAAATTGTTAAGAGCGTTCTTAGTTTACCAGTCTTATCCGCTACTAAATTTCCAGTTGGATTACATTCCCGTGTGGAAGATGTGATTCGAACCATAAAAAAAAAATCCACCCAAGTTTTTACGATAGTGATATGTGGAATGGGAGGATCGGGTAAAACCACCCTTGCCAAAGCCATCTATAATCAAATTCATGGTACATTCACGAAGAAAAGTTTCATTGAAGATATTGCAGAAGTTAGTCAAACAAGAGGGCTTGTTCATTTACAAGAACAACTTCTTTCAGATGTCCTAAAAACGAAGGTGAAGATAAGTAGCGCTGAGATGGGAAGAAGTATGATTTGGGAAAGACTTTATGGGAAAAGGGTGCTCGTTGTACTTGACGATGTGAAAAAGTATGATCCATTAGACCTATGGGAAATCAGTCCATGGTTCGGTGAAGGAAGTGTAATGATCATTACAACAAGGGATGAAGATCTACCTAGGTTACATCATGCTGATTCTGTTTTTGAGATAAATCTAATGAATTCCAATGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAGAACAATACCAATTCTTTGCAAAAAAAGTAGTTTCTTATTGTGGAGGACTACCTCTAGCTCTTGAAGTCATTGGAAGTTATTTGTATGAAAGGACGAGAGAAGAATGGAATAGAGTATTGTTGAGATTAGACAATATTCCCTCGCATGAAGTCCCGCAGATATTGAAAATAAGTTACGACCGTTTAGGTAATCAAATGGAAAAAGATTTATTTCTTGATGTAGGTCGTTTCTTTGTTGATAAAGACAGAGGCTATGTTACGAAGATCCTAAATGGCTGTGGAATAGACGCTGATAGTGGAATAAGAGTTCTCATAGAGCGTAGCCTCATACAAATTAAAAAAAACAACAAATTTGGAATGCATAATTTGCTACGAGAAATGAGAAGAGAAATTATTCTTGAACATGGGAAGAGCAGTCCACTGCGGCTTGATAGCGATGGAAAACATGCACTGTCAGAGAATACTGAGAGAAAAGTCATTGAGAGATTGTCTCTCACAAGAAAATATCCTGTAGAGGTAAGAGAACCGCTGAAACTGAGATGGATCAGTTTGCAAGGGTTTTCTTCGGAATACCTTCCTGACGACTTTTATGTGCATGATGCAATAGTGATTGATTTAAAACACAGTTTTCTTCGGTTCGTCTGGAAAGAACCCAAGGTTTTGGCGTATCTAAAAGTCCTGAATCTTAGTCACTCCAAGTACTTGATAGAAACCCCTGACTTCTCCGGACTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGCCCAAGATTACGCAAAGTACACCCTTCTATTGGATATCTCTGCAATCTTATGCTGCTAAATTTGAAGGACTGTACAAGTCTATGCAATCTCCCCGTACAGATATGTAACTTGAAATCTTTGAAAACTCTCATCCTTTCTGGTTGTTCAAAAATTGACATATTAGAAAAAGATATGGTGCAAATGGAATCCTTGAGAATTCTAATCGCTGAAAATACTGCTGTGAAACAACTGCCATTTACAATTGTATGCTCAAAAAGCATTGGATATTTATCCCTACCTCGATCTGAGGGATTATCACATAATCTTTTTCCTTCTATAGTTCGGTCTCGGATGCCGCCAACAATTAATCCCCTATCTTATATTAATTCGTTCATGGATATGGAGGATAATAGTTGGGATGATATTGCACCATTGCTCAAGAGCCTTGCAAATCTTCGGAGTATTTTGGTGCAATGTGACTCGGAGTTTCAACTATCTGAGCAAGTAAAAACCATACTGGCAGAATATGGTGGAAATATTACCGAATCAGGAATTTCAAAGCATGATTTCAGGTCTTCTCTCACTGGTGTCGGAAGATACAAAAAATTCTTCAATAGTGTATTTGGAAGCAGTGAGTCATGTGATGTTTCTCTCCCAGGTGACAATGATCCTTATTGGTTGGCCCATATGGGTGATGGACATTCTGTTTCTTTCACTGTGCCACAAGATCGTGTCGTGAAGGGAATGGCTTTGTGTGTGGTTTATTTATCAACCTCCGAAATCATTGAACCTGAACTTAGTACTGTCTTAATTGTTAATTACACGAAGTGCACATGCCAGATACACAACCATGGCACACTAATTTCCTTTAATGATGATGATTGGCCTGGCATAATGTCAAATTTAGGATCAGAAGACAAGGTGGAGATTTTTGTGAGTTTTGGTCATGGATTGGTCGTCAAGAACACAGCTGTCTATCTAATATGTAGTGAATCAAATGACTTAGAAAAGGAGCTTGTGCCAAAGAAAAATTCCTTTATTAGATTTATAAAGAAAATTGTAATGTGA 2901 0.3881 MALASSTSKLPRMYDVLINFNGEDIQRRFVSHLDSALSAVGFTTFLHHPNALNPIHIQQPILNLSHVAIVVFTKSYSQSSWCLHQLQQIIKWHQTYCRHVLPVYYEIEPSDVRLQKGDFGKAFKATAEQTFSGQQLEHGMSRWSHALTKAANFFGWDERNHRNDAELVEKIVKSVLSLPVLSATKFPVGLHSRVEDVIRTIKKKSTQVFTIVICGMGGSGKTTLAKAIYNQIHGTFTKKSFIEDIAEVSQTRGLVHLQEQLLSDVLKTKVKISSAEMGRSMIWERLYGKRVLVVLDDVKKYDPLDLWEISPWFGEGSVMIITTRDEDLPRLHHADSVFEINLMNSNESLELLSWHAFREAKPKEQYQFFAKKVVSYCGGLPLALEVIGSYLYERTREEWNRVLLRLDNIPSHEVPQILKISYDRLGNQMEKDLFLDVGRFFVDKDRGYVTKILNGCGIDADSGIRVLIERSLIQIKKNNKFGMHNLLREMRREIILEHGKSSPLRLDSDGKHALSENTERKVIERLSLTRKYPVEVREPLKLRWISLQGFSSEYLPDDFYVHDAIVIDLKHSFLRFVWKEPKVLAYLKVLNLSHSKYLIETPDFSGLPSLEQLILKDCPRLRKVHPSIGYLCNLMLLNLKDCTSLCNLPVQICNLKSLKTLILSGCSKIDILEKDMVQMESLRILIAENTAVKQLPFTIVCSKSIGYLSLPRSEGLSHNLFPSIVRSRMPPTINPLSYINSFMDMEDNSWDDIAPLLKSLANLRSILVQCDSEFQLSEQVKTILAEYGGNITESGISKHDFRSSLTGVGRYKKFFNSVFGSSESCDVSLPGDNDPYWLAHMGDGHSVSFTVPQDRVVKGMALCVVYLSTSEIIEPELSTVLIVNYTKCTCQIHNHGTLISFNDDDWPGIMSNLGSEDKVEIFVSFGHGLVVKNTAVYLICSESNDLEKELVPKKNSFIRFIKKIVM* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0278 966 Gene3D Ribonuclease Inhibitor 515 787 IPR032675 -
Pvu10g0278 966 Gene3D - 7 173 IPR035897 -
Pvu10g0278 966 Gene3D - 343 426 IPR042197 -
Pvu10g0278 966 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Pvu10g0278 966 SUPERFAMILY L domain-like 516 763 - -
Pvu10g0278 966 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 541 939 - -
Pvu10g0278 966 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 510 - -
Pvu10g0278 966 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 510 IPR044974 GO:0006952
Pvu10g0278 966 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 541 939 IPR044974 GO:0006952
Pvu10g0278 966 Pfam NB-ARC domain 193 423 IPR002182 GO:0043531
Pvu10g0278 966 PRINTS Disease resistance protein signature 210 225 - -
Pvu10g0278 966 PRINTS Disease resistance protein signature 285 299 - -
Pvu10g0278 966 PRINTS Disease resistance protein signature 377 391 - -
Pvu10g0278 966 PRINTS Disease resistance protein signature 653 669 - -
Pvu10g0278 966 SMART till_3 13 153 IPR000157 GO:0007165
Pvu10g0278 966 SMART AAA_5 207 344 IPR003593 -
Pvu10g0278 966 Pfam TIR domain 14 182 IPR000157 GO:0007165
Pvu10g0278 966 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 436 IPR027417 -
Pvu10g0278 966 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Pvu10g0278 966 Gene3D - 174 336 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0278 Pvu-Chr10 3924009 3927700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0278 14 699 WRKY Transcription Factor Family AT4G12020 26.694 1.72e-53 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0278 - - vun:114165123 1285.4