Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0277 ATGGAATTGGAGTCTTCATCGTCCAAACTCCCGCAGATGTACGATGTTCTCATAAACTTTAATGGAGAAGACATCCAAAGAAAATTTGTTTCTCACCTCGATTCTGCCCTCTCTGCCTTTGGCTTCACCACTTTGCTTCACCACCCCAATGCACTCAACCCAATTCACATCCAACAACCTATTCTCAATCTCTCTCGTGTAGCCATTGTTGTTTTCACCAAATCCTATTCTCAGTCTGCTTGGTGTCTTCATCAGCTTCAACAAATCATCAAATGGCACGAAACTTATTGCCGGCATGTTCTGCCAGTTTATTACGAAATTCAGCCATCTGATGTACGTCTTCAAATGGGTGATTTTGGTGAAGCCTTCAAAGCAACTGCACACCAAACGTTTTCAGCAGAACAAGTGGAGCATGGTATGTCTAGGTGGAGCCACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAACTAGTGGACAAAATTGTTAAGACCGTTCTTAATTTACCAGTCTTGTCTGCTACTGAATTTCCAGTTGGATTACAATCCCGTGTGGAAGATATATGTGGAAAGGGAGGATCGGGTAAAACCACCCTTGCCAAAGCCATCTACAATCAAATTCACGGTACATTCATGGAAAAAAGTTTCTTTGAAGATATGACACGAGTTAGTCAAACAAGAGGGCATGTCCATTTACAAGAACAACTTCTTTCGGATGTCCTAAAAACAAAGGTGGAGATAAGTAGTGTTGAGATGGGAAGAAGTATGATTCGGGAAAGACTTTCTCTGAAAAGGATGCTCATTGTACTTGACGATATGATCCATGAGTACTATCCATTATTAGACCTAAGGAAAAATCGTGGATGGTTCGGTGCTGGAACTGTAATAATCATTACAACAAGAGACGAAGACCTACAGAGTATAGTTGATTCTGTTTTTCGCATAGATCCAATGAACGCAAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAAAAGAATACAATGACCTTGCAAAAACACTAGTTACTGTTTGCGGAGGACTACCTCTAGCTCTTGAAGTCATTGGAAGTTATTTATATGAAAGGACGAAAGAAGAATGGAATACAATATTCTTAAAATTAGAGAAAATTCCCAAGCTTGAATTTTATCATATATTGAGACTAAGCTTCGACGGTTTACGCAATCAAATAATGGAAAAAGATTTATTCCTTGATGTATGTTCTTCTTTTGTTGGCAAGGGCAGAGCCAAAGTTATGAAGATCCTAAAGGGCTGTGGAATAGACGCCGCCGATAGTGGAATAAGACTTCTCATAGAGCGTAACCTCATACAAGTTAATAAGAACAACAAATTAGAAATGCATCCGTTCCTACGAGAAATGGGAAGAGAAATTATTCGTCAAATTTCAGGAAAGGAATCTGAGAACAGTGAACTGTGGTTTGAATATGTACTGTCAGAGAATACTGGGACAAATGTCATTCAGAGATCGCCTGGGAAAATGTTTTTTAGTAGAAGAGATTTCTTCAAACCTTATCCTTTAGAGGTTAGAGACCCATCAAGATTGCTGATACTAGCTGGAGATTCTGAGTATCTTTCTAAGAAACTGACATGGATCCAATTGCAAGGGTTTTCTTCAGAATGCCTACCTAACAACTTTTATCTGCATGATGCAGTAGCGATTGACTTACAACACAGTCTTCTTCGATGTGTTTGGAAAGAACCCCAGTCACTCCAAGTACTTGATAGAAACCCCGACTTTTCTAGACTACCAAGTCTTCAGCAGCTCATTCTCAAAGATTGTCCAAGATTGCACGAAGTACACCAATCTATTGGAAGTCTATGCTATCTTATAGTGCTAAATTTGAAGGACTGTACAGGTCTAAGCAATCTCCCGAGTGAGATATATATGTTGAAATCTTTAAAAACTCTAATTCTTTGTGGTTGTCCAAAAATTGACATATTGGAAAAAGATATATTGCAAATGGAATCTTTGATAACACTAATTGCTGAAAATACAGTTGTGAAACAAGTGCCTTTTTCAATTGCATACTCAAAAAGCATTGGATATATATCCCTGCGTGAATGTGAGGGATTGTCACATAATCTGTTTCCTTCTATCATTCTGTCTCGGATGTCGCCAAAAATGAATCCCTTATCTTATATTCATTCCTACATGGATATGGAGGATGATAGTTGGGATGATATTGCACCATTACTTGCCAGCCTTGCAAATATTCGAAGTGTTTTGGTGCAATGTGAGGCCGAGTTTCAACTATCCGAGAAAAATACAAAGCATGATCTCAGGTCTTCTCTGACTGGTGTTGGAAGATACAAAGAATCCTTCAATACTGTGATCGATAGAATACCTAAGGTATTTGAAAGCAGTGAGTCGTGTGATGTTTCTCTCCCAGGTGACAATGATCCTTATTGTTTGACCCATATGGGTGAGGGACATTCTGTTTCTTTCACAATACCTCGAGATCATGAGGTGAAGGGAATGGCTTTGTGTGTCGTTTATTCATCAACCCCTGAAAGCCTGGAAACTGAATGTCTTAGAAGTGTGTTAATTGTTAATTACACAAAGTGCACATGTCAGATACACAACCATGGCACTTTAATTTCCTTTAATGATGAAGATTGGCATGACATAAAGTCAAATTTAGGATCAGGAGACAAGGTGGAAATTTTTGTGACTTTCGGTCATGGATTGGTAGTCAAGAACACAACTGTATCTAATATGTAG 2790 0.3903 MELESSSSKLPQMYDVLINFNGEDIQRKFVSHLDSALSAFGFTTLLHHPNALNPIHIQQPILNLSRVAIVVFTKSYSQSAWCLHQLQQIIKWHETYCRHVLPVYYEIQPSDVRLQMGDFGEAFKATAHQTFSAEQVEHGMSRWSHALTKAANFFGWDESNYRSDAELVDKIVKTVLNLPVLSATEFPVGLQSRVEDICGKGGSGKTTLAKAIYNQIHGTFMEKSFFEDMTRVSQTRGHVHLQEQLLSDVLKTKVEISSVEMGRSMIRERLSLKRMLIVLDDMIHEYYPLLDLRKNRGWFGAGTVIIITTRDEDLQSIVDSVFRIDPMNANESLELLSWHAFREAKPKKEYNDLAKTLVTVCGGLPLALEVIGSYLYERTKEEWNTIFLKLEKIPKLEFYHILRLSFDGLRNQIMEKDLFLDVCSSFVGKGRAKVMKILKGCGIDAADSGIRLLIERNLIQVNKNNKLEMHPFLREMGREIIRQISGKESENSELWFEYVLSENTGTNVIQRSPGKMFFSRRDFFKPYPLEVRDPSRLLILAGDSEYLSKKLTWIQLQGFSSECLPNNFYLHDAVAIDLQHSLLRCVWKEPQSLQVLDRNPDFSRLPSLQQLILKDCPRLHEVHQSIGSLCYLIVLNLKDCTGLSNLPSEIYMLKSLKTLILCGCPKIDILEKDILQMESLITLIAENTVVKQVPFSIAYSKSIGYISLRECEGLSHNLFPSIILSRMSPKMNPLSYIHSYMDMEDDSWDDIAPLLASLANIRSVLVQCEAEFQLSEKNTKHDLRSSLTGVGRYKESFNTVIDRIPKVFESSESCDVSLPGDNDPYCLTHMGEGHSVSFTIPRDHEVKGMALCVVYSSTPESLETECLRSVLIVNYTKCTCQIHNHGTLISFNDEDWHDIKSNLGSGDKVEIFVTFGHGLVVKNTTVSNM* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0277 929 CDD AAA 197 325 - -
Pvu10g0277 929 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Pvu10g0277 929 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 421 IPR027417 -
Pvu10g0277 929 SUPERFAMILY L domain-like 474 724 - -
Pvu10g0277 929 Pfam TIR domain 14 176 IPR000157 GO:0007165
Pvu10g0277 929 Gene3D - 11 183 IPR035897 -
Pvu10g0277 929 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 925 IPR044974 GO:0006952
Pvu10g0277 929 Gene3D - 327 410 IPR042197 -
Pvu10g0277 929 Pfam NB-ARC domain 193 392 IPR002182 GO:0043531
Pvu10g0277 929 SMART till_3 13 153 IPR000157 GO:0007165
Pvu10g0277 929 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 925 - -
Pvu10g0277 929 Gene3D Ribonuclease Inhibitor 541 728 IPR032675 -
Pvu10g0277 929 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 156 IPR035897 -
Pvu10g0277 929 PRINTS Disease resistance protein signature 194 209 - -
Pvu10g0277 929 PRINTS Disease resistance protein signature 269 283 - -
Pvu10g0277 929 PRINTS Disease resistance protein signature 361 375 - -
Pvu10g0277 929 PRINTS Disease resistance protein signature 603 619 - -
Pvu10g0277 929 Gene3D - 189 326 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0277 Pvu-Chr10 3911568 3914942 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0277 549 699 WRKY Transcription Factor Family AT4G12020 29.605 1.70e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0277 - - vun:114165123 1244.57