Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0275 ATGGAAAAACTTGACTACGACTTATTGTCAATTCCTGAATTCCCAGTTGGATTAGAATGGCGAGCGCAAGAATTGATTGAGTTCATCAATGGTCGATCAGAAACAAGTTCTCTGTTGGGGATCTGGGGAATGGGTGGATCGGGTAAAACAACCTTGGCCAAAGTAATCTACAATCAAATTGGCAAGGGATTCACCCGTAGAAATTTCATTGAAACGAATAACAGAGGATGTATTGATTTGCAAGAAAAACTTCTTTCAGATGTCCTAAAAACAAGGGTCAAGATACATAGCATTGCAATGGGAATAAGTTTGATTGAGAACAGACTTTATGGAGAAAAGGTTCTGATTGTGCTTGATGATGTGACCGAGTTTAAACAGTTGAAAGCCCTATTTGGAAATCGCAAATGGTTTGGTGAAGGAAGTGTGATAATTATTTCAACCAGAGATGTACGCCTACTAAAACTACTCAAAGTTGATTATGTTTATACAATGGAGGAAATGGACGAAAATGAGTCTCTTGAGCTTTTTAGTTGGCATGCTTTTGGAAAAGCCAAACCAAGTGAAGACTTCAATGAACTTGCAAGAAATGTAGTTGCTTATTGTGGAGGGCTACCACTAGCTCTTGAAGTCCTTGGCTCATATTTGATTGAGAGGACAAAGAAAGAGTGGGAAAGTGTGTTGTCGAAACTGGAAACAATTCCAGATGATCGAGTTCAACGGATATTAAGAATAAGCTTTGAGGGTTTACGCAATGACATGGAAAAGGATATATTTCTTGATGTATGTTGTTTCTTTATTGGTAAAGACAGAGGCTATGTGACAGAGATACTAAATGGCTGTGGACTATGTGCTGATATTGGAATAACAATTCTCATAGAACGTAGCCTCATAAAAGTTGAAAGGAATAACAAACTTGGAATGCATCCCTTGCTACGAGAATTGGGAAGAGAGATAATCCGTGAAAGTTCAAGAAAGGAACCTGGGAAGCGCAGTCGATTGTGGCTTAATGAGGATGCAGTGAAAGTATTGACAGAGAATACTGGAACAGAAGCTGTTGAGGGTTTGGCCCTGACACTGCATTTGACCAGCAGAGATTGCTTTGAAGCTTATGCTTTTAAGGGAATGAAGAGATTGAGATTACTGCAACTTGACCATGTAAAACTATCCGGAGACTATGGGTATCTTTCTAAGCATCTGAGATGGGTCTGTTGGCATGGGTTTCCATCAAAATACATACCCAACAATTTTAGTCTGAAAGATGTGATTGCGATTGATTTAAGGCACAGTAATATTAGAATTGTATGGAAACAACCCCAGGTGTTAGGGTGGCTTAAAATGATCAATCTTAGTCACTCCAAGTACTTGATAGAAACCCCTGACTTTTCAAAACTACCAAATCTTGAAAAGCTCGTTCTCAAAGATTGTCCAAGTTTGTGTAAGGTACACCAATCCATTGGAGATCTCCATAATCTTCTATTGATAAATTTGAAGGACTGTATAAGCCTGAGCAATCTCCCAATAGAGATATACAAGTTGAAATCTGTGAGAACTCTCATCCTATCTGGTTGTTCGAAGATTGACAAATTGGAAGAAGATATAGCACAGATGGAATCCCTGACAACTCTACTTGCTGATAATACTGCTGTGAAACAAGTCCCCTTTTCAATAGTAAGCTCCAAAAGCATTGGATATATATCCTTATGCGGATTTGAAGGACTGGCACGAAATGTTTTTCCTTCTATCATCCAGTCTTGGATGTCACCAACAATGAATCCTCTCCTTTATATTAGTCTGTTTTCTGGCACATCATGTTCTCTGGTTTCCATGAATACACAAAATAATACTTTGGGTGAGCTTGTACCAATTCTTAGAAGGCTTCCAGATCTTCGAAGTGTTTTGGTGCAATGTGAGACAGAGTTTCAACTGTCTAAACATGTTAAAACAATTATGGTTGAAGATGTTGTAAATTTTACAGAATTAGGAATTTCAAGGCATCACTTGAGGTCTTCTTTGATTGGAGTTGGAAGTTACAAAGAATTCTTCGATATTCTCAGCGATAGGATATCTGAGGGATTGAAAACCAATGAGGCTTGTGAAGTTTTACTTCCAGGTGACAATGATCCTTATTGGTTGGCCCATACAGGTGAGGGACATTCAGTGTATTTCACTGTGCCAGAGGACTGCAGCATGAAGGGAATGGCTTTGTGTATTGTTTATTTATCAAACCCTGAAATCACGGCAACCGAAAGTCTTACTAGTATCTTAATAGCTAATTACACAAAGCGCACCCTGCAGATACACAAGCAAGACACAGTGATTTCCTTTAATGATGAAGATTGGCAGGAGATAATATCACATTTGGGAGGTGGAGACAATGTGGAGATTTTTGTGACTTTTGGTCATCACTTGGTGGTCAAGAAAACAGCTGTCTATCTGATGTATGGTGAATCAAATGATATAGAAATTGAGCCGCCTCAATGCGAATCGGATGATGTAGAAATTGAGACGAGGCCTTGTGAATCAAATGGTTTGGAAAGTAAGCCGAAGCATGGTGAATCAAAGGATATCGGAATTGTGTCCACGAACTGTGAATCAAATGATATCAAAATTGAGCCCAAGCCTTGTGAATCAAATGTCTTGGAAAAGAAGTCTGATGATCCTAAGCCAAATGGAAATGCTTTCACTAGATTATTGAAGAAATTTGCAATGTGTGACTGGAATCTAGAAGAAAATGGAGAAAAAAGGACTAAAGGAGAATGA 2760 0.387 MEKLDYDLLSIPEFPVGLEWRAQELIEFINGRSETSSLLGIWGMGGSGKTTLAKVIYNQIGKGFTRRNFIETNNRGCIDLQEKLLSDVLKTRVKIHSIAMGISLIENRLYGEKVLIVLDDVTEFKQLKALFGNRKWFGEGSVIIISTRDVRLLKLLKVDYVYTMEEMDENESLELFSWHAFGKAKPSEDFNELARNVVAYCGGLPLALEVLGSYLIERTKKEWESVLSKLETIPDDRVQRILRISFEGLRNDMEKDIFLDVCCFFIGKDRGYVTEILNGCGLCADIGITILIERSLIKVERNNKLGMHPLLRELGREIIRESSRKEPGKRSRLWLNEDAVKVLTENTGTEAVEGLALTLHLTSRDCFEAYAFKGMKRLRLLQLDHVKLSGDYGYLSKHLRWVCWHGFPSKYIPNNFSLKDVIAIDLRHSNIRIVWKQPQVLGWLKMINLSHSKYLIETPDFSKLPNLEKLVLKDCPSLCKVHQSIGDLHNLLLINLKDCISLSNLPIEIYKLKSVRTLILSGCSKIDKLEEDIAQMESLTTLLADNTAVKQVPFSIVSSKSIGYISLCGFEGLARNVFPSIIQSWMSPTMNPLLYISLFSGTSCSLVSMNTQNNTLGELVPILRRLPDLRSVLVQCETEFQLSKHVKTIMVEDVVNFTELGISRHHLRSSLIGVGSYKEFFDILSDRISEGLKTNEACEVLLPGDNDPYWLAHTGEGHSVYFTVPEDCSMKGMALCIVYLSNPEITATESLTSILIANYTKRTLQIHKQDTVISFNDEDWQEIISHLGGGDNVEIFVTFGHHLVVKKTAVYLMYGESNDIEIEPPQCESDDVEIETRPCESNGLESKPKHGESKDIGIVSTNCESNDIKIEPKPCESNVLEKKSDDPKPNGNAFTRLLKKFAMCDWNLEENGEKRTKGE* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0275 919 PRINTS Disease resistance protein signature 38 53 - -
Pvu10g0275 919 PRINTS Disease resistance protein signature 108 122 - -
Pvu10g0275 919 PRINTS Disease resistance protein signature 201 215 - -
Pvu10g0275 919 PRINTS Disease resistance protein signature 510 526 - -
Pvu10g0275 919 SUPERFAMILY "Winged helix" DNA-binding domain 237 343 IPR036390 -
Pvu10g0275 919 Gene3D - 166 250 IPR042197 -
Pvu10g0275 919 Coils Coil 526 546 - -
Pvu10g0275 919 Gene3D Ribonuclease Inhibitor 358 657 IPR032675 -
Pvu10g0275 919 Pfam NB-ARC domain 33 234 IPR002182 GO:0043531
Pvu10g0275 919 Gene3D - 10 161 IPR027417 -
Pvu10g0275 919 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 5 815 - -
Pvu10g0275 919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 260 IPR027417 -
Pvu10g0275 919 SUPERFAMILY L domain-like 357 633 - -
Pvu10g0275 919 CDD AAA 23 160 - -
Pvu10g0275 919 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 815 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0275 Pvu-Chr10 3896814 3905599 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0275 16 527 WRKY Transcription Factor Family AT5G45050 31.734 4.75e-71 254