Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0271 ATGGCATCCGCGTCTTCTTCTTCTTCTTCGTTTTTCTCAAAATCCAGAAATCGAGAGGAAGTGTTCATCCAATTTTTTGGAGAAGACATCCGTAAGAATTTCATTTCTCATCTCAGTTCTGCCCTTTTACAGGCTGGAGTAAAACCTTCCTTCCTTGCCGAGGGAATGATGCCGAGAATACTTTTGTCATCAATTGAAAGCTTTCAGATTGGAATAGTTGTTTTCGCCAAAGCATACAGTGAATCTTCTCGGTGTGTTCAAGAGCTTGTGAAAATCGTTGAATGTCACGAGACTCACGGCCTAATGGTTATGCCCGTGTTTTATGAAATTGACCCATCCGATGTAAGACATCAGAAGCCTTATATTCCAAAAACGGCAATTACACAAAACAATTTTTCAGGAAAACACCAGACCATTTGGCCCCTGAGGTGGAGACGTGCACTCACCAAAGCTGCAAATTTGCCTACTTGGTGGGATGGCAGCAAACACAGGAATGATGCTGAACTAGTAGAGGAAATTGTTAAGTTTGTTCTCGCTAAACTTGTGCACCTTGAACACCCCTTGTCTATAACTAAATTTCCTGTTGGATTAGAACCCCATGTGGAAAAAGTGATGGGATTGTTTGAAAATCAACCCACCAAAGTTTGTATTATAGGGATATCAGGAATGGGAGGATCGGGTAAAACTACCGTAGCCAAAGCCATCTACAATCAAATTCCTCATACATTTGGTGATAAAAGTTTCATTCAAGATATTAGACAAGTTTGTGAAACAGATGGCATAGGCCTTGTTCATTTACAAGAACAACTTCTATCAGATGTCCTAAAAGCAAATGTGAAGATAGAGAGTGGTAGGATGGGAAAAACTATGATCGAGAACAGACTTTCTGAAAAAAAGTTATTCATTGTGCTTGACGATGTGAATGAGATAGACCAATCGAAACACCTATGTGGAAATGGTAAATGGTTTGGTCAAGGAAGTATAATAATCATTACAACTAGAGATTTAGACCTGCTTTGTCAACTTAATGTTGATTATGTTTATGAGATGGATAAAATGGACCAAACTGACTCCCTTGAACTTTTTAGTTGGCATGCTTTTAGAGAAGCAAAACCAAGGGAAGACTTCAATGAACTTGCAAGAGATGCAGTTGCTTATTGTGGTGGACTACCACTAGCTCTTGAAGTCCTTGGTTCTTATTTATGTAAAAGGTCAGAGAATGAATGGAGAAGTGTATTGTCGAAACTAAAAGTAATTCCCAATACTCAAGTTCAGAACAAACTAAGAATAAGCTTTGACGGTTTACGCGATGACATGGAAAAGGATATATTTCTAGATGTATGTTGTTTCTTTATTGGTAAGGAGAGAGGCTATGTCACAGAGATACTAAATGGGTGTGGACTACATGCTGATATTGGAATAACAATTCTCATAGAGCGTGGTCTTATAAAAATTGAAAAGAACAATAAACTTGGAATGCATCATTTGCTCCGGGATATGGGACGAGAGATTGTGCGCCAAAGTTCAACAATGCAACCTGGGAAGCGCAGTCGATTGTGGCTTTCCAAGGATGTAATTGATGTATTGACAAAGAATACTGGGACAGAAGCTATTGAGGGATTGTCTCTGAACTGTCGGTCAACGAGCAAAGATTTCTTCGAAGCTTATGCTTTTGACAAAATGAAGAGGTTGAGATTCTTGCAACTTGATCATGTACAACTCACTGGAGATTATGGATATCTTTCTAAGCAACTGAGATGGATCTATTGGCAAGGATTTCCATTAAAGTACATACCTAACAACTTCTATTTGGAAGGTGCAATTGTGATGGATTTCCAACACAGTAATCTTAGACTATTGTGGGAAGAACCCAAGGTTTTGCCGTTGCTAAAAATCCTCAATCTTAGTCATTCCAAGAACTTGATAGAAACCCCTGACTTTTCAAAATTACCAAGTCTTGAAAAGCTCATTCTCAAGCATTGTCCAAGTTTGCGCAAGGTACACCAATCCATTGGAGATCTCCACAATCTTCTACTTATAAATCTGAAAGGTTGTACAAACCTAAGCAATCTCCCAAGTGAGACATATAAGTTGAAATCTTTGAAAACTCTCATCCTATCAGGTTGTCTGAAGATTGACATCTTTAAAGAAGATATATTGCTCATGGAATCCCTGACAACTCTAATTTCTGAAAATATTGCTGTGAAACAAGTTCCCATTTCAGTAGTAAGCTCAAAAAGCATTGGATATATACTTCTAGACGGAAATAAAGGATTGTCACTTACTGTTTTTCGTTCTATCATTTGGTCTTGGATGTCACATACTATTAATCCCCTGTCTCGTATTCGTCCGTTTCGTGGCATTTCATCATCTCTAGTTTCCATGAATATCAAGAATAATGATTTGGGGGATCTAGCACCAATCCTAAGCAGCATTTTAAATCTGCGTAACGTTTTGGTGCAATGTGTCACGGAGAATGAAACAGCGACACAAGTAATAACAATTTTGGAGGAAGTTCGTGGTGTAAGTTTGAGTACATTAAAAATAAGACCATCTACACCAGAAATTTCAAAGCATCCCTTAAGACCATATTGGATTGAACTTGGAAGTTATCAAGAAGAAGTCTTCAATACTCTCCGCAAGAGCATATTTGAGGGATTGGAAACCAGTGAGTCTTGTGATGTTTTTCTCCCCAGTGACAATTATCCTTATTGGTTGGCTTATATGTCTGAGGAAGACTCAGTCTTTTTCACTGTGCCTGAAAATTTTAACATTGATGGAATGATTTTGTGTGTTGTGTATTTATCAACCCTTGAAAACACAACAACTGAATGTCTTATTAGTGTCTTAATGGTTAATTACACAAAGTGCACAATCCAGTTACTCAAGGGAGACCCGACAATTTCCTTTAATGATGTAGATTGGCAGGGCTTGATATCACATTTGGTATGTGGAGACAAGGTGGGGATTTTTGTTATTTTTGCAGATGGATTTGTAGTCGAGAAGACAGCTGTCTATCTAATGTGTGATGGATCAATTGACAAGGAATGA 3051 0.3818 MASASSSSSSFFSKSRNREEVFIQFFGEDIRKNFISHLSSALLQAGVKPSFLAEGMMPRILLSSIESFQIGIVVFAKAYSESSRCVQELVKIVECHETHGLMVMPVFYEIDPSDVRHQKPYIPKTAITQNNFSGKHQTIWPLRWRRALTKAANLPTWWDGSKHRNDAELVEEIVKFVLAKLVHLEHPLSITKFPVGLEPHVEKVMGLFENQPTKVCIIGISGMGGSGKTTVAKAIYNQIPHTFGDKSFIQDIRQVCETDGIGLVHLQEQLLSDVLKANVKIESGRMGKTMIENRLSEKKLFIVLDDVNEIDQSKHLCGNGKWFGQGSIIIITTRDLDLLCQLNVDYVYEMDKMDQTDSLELFSWHAFREAKPREDFNELARDAVAYCGGLPLALEVLGSYLCKRSENEWRSVLSKLKVIPNTQVQNKLRISFDGLRDDMEKDIFLDVCCFFIGKERGYVTEILNGCGLHADIGITILIERGLIKIEKNNKLGMHHLLRDMGREIVRQSSTMQPGKRSRLWLSKDVIDVLTKNTGTEAIEGLSLNCRSTSKDFFEAYAFDKMKRLRFLQLDHVQLTGDYGYLSKQLRWIYWQGFPLKYIPNNFYLEGAIVMDFQHSNLRLLWEEPKVLPLLKILNLSHSKNLIETPDFSKLPSLEKLILKHCPSLRKVHQSIGDLHNLLLINLKGCTNLSNLPSETYKLKSLKTLILSGCLKIDIFKEDILLMESLTTLISENIAVKQVPISVVSSKSIGYILLDGNKGLSLTVFRSIIWSWMSHTINPLSRIRPFRGISSSLVSMNIKNNDLGDLAPILSSILNLRNVLVQCVTENETATQVITILEEVRGVSLSTLKIRPSTPEISKHPLRPYWIELGSYQEEVFNTLRKSIFEGLETSESCDVFLPSDNYPYWLAYMSEEDSVFFTVPENFNIDGMILCVVYLSTLENTTTECLISVLMVNYTKCTIQLLKGDPTISFNDVDWQGLISHLVCGDKVGIFVIFADGFVVEKTAVYLMCDGSIDKE* 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0271 1016 Pfam TIR domain 21 181 IPR000157 GO:0007165
Pvu10g0271 1016 Gene3D Ribonuclease Inhibitor 483 839 IPR032675 -
Pvu10g0271 1016 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 446 IPR027417 -
Pvu10g0271 1016 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 1006 IPR044974 GO:0006952
Pvu10g0271 1016 SUPERFAMILY L domain-like 555 831 - -
Pvu10g0271 1016 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 22 1006 - -
Pvu10g0271 1016 Pfam NB-ARC domain 199 417 IPR002182 GO:0043531
Pvu10g0271 1016 Gene3D - 182 347 IPR027417 -
Pvu10g0271 1016 Gene3D - 352 436 IPR042197 -
Pvu10g0271 1016 SMART till_3 18 154 IPR000157 GO:0007165
Pvu10g0271 1016 PRINTS Disease resistance protein signature 217 232 - -
Pvu10g0271 1016 PRINTS Disease resistance protein signature 294 308 - -
Pvu10g0271 1016 PRINTS Disease resistance protein signature 387 401 - -
Pvu10g0271 1016 PRINTS Disease resistance protein signature 696 712 - -
Pvu10g0271 1016 SUPERFAMILY "Winged helix" DNA-binding domain 423 529 IPR036390 -
Pvu10g0271 1016 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 155 IPR035897 -
Pvu10g0271 1016 Gene3D - 17 181 IPR035897 -
Pvu10g0271 1016 ProSiteProfiles TIR domain profile. 17 181 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0271 Pvu-Chr10 3851464 3856068 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0271 12 742 WRKY Transcription Factor Family AT4G12020 29.694 2.85e-77 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0271 - - vun:114167037 1449.11