Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0270 ATGCTTCGGTTTCTCGCAACTGGATCAAATATTTCTCATCCTTTTCCACACACAGCAGTTATAAAAGCTCTGCGAGTGTTCACATCCACCACCTGTTCGAGCATTTGCGTCACCCAAACCAAGGTTGAAGTTGAAGATGATAAAGGCAAATGGAGTGATGCTACTGAACTTTTGAGAAAATGGGGTTGCAGTGATGATGATTTGGTGAGAATATTCTCGCGCTGTCCCTCGTTGCGCAATGCTGATCCCACGCAGGTCCAATCTAAACTGTGCCTGCTTAGTGATTTGGGCTTGCGTGCTTCTGAACTTGTGAAGATTGTCAATTGTAGACCACGGTTTTTCCAGTCTCGGATTAACTCTTATTTAGAAGAGAGGATTGGACATCTCACATCATTGTTTGAGTCCAGGGAAGTGCTTCAGAAGGCCATTGTAAGGAACCCTTCATTGCTGCTATCGGATGGTCGCTATAATGTTAAGGCCACAGTTGAGCTCTATGAGAAGTTGGGTGTTAAGAAAGGGGACTTGGTTCAGATGCTGCTTTTGCGGCCCACGGTTATTTCAAGGACTTCCTTTGATGCTGAGAAGCTGGAATATTTAAGCAGGACTGGGCTTACTGTGGATTCAAAGATGTATAAATATGTGGTGACTTTAATTGGAATCTCTCGCGTGGAAACTATCCGGGAGAAGGTGGCCAATTTCGAAAAGTTTGGGTTTTCTGAAGAGGAGATATTTGGTCTTGTGGGGAGGTCTCCTAATGTTTTGACATTGTCGACAGACAAGGTTCAGAGGAACATGACTTTCATTTTGGGCACGATGAAGCTTGATGCTAAGATGGTTCTAAAGCAGCCGTATCTATTGTATGCCAATGTGGATACTGTTTTGAAGCCAAGAGTTCTACTAGCATTGAAGATTCAAGATATGGATTCAAAGTGGCAGATCATAGGACCAACGATAGTTAGTGTACTTAGGATGCAAGAGACGAGATTTTTGGACTTGTTTGTCAAATGCCATGGGGAGGATGTTGCCAATGAATTGATGGATTTCTATAAAAGGACAAAAGAGGTTAAGAGATTAGGAGAGTCATCAAAGAAGTGCAGTAGGAGAGGATTCCCTTTCTGA 1119 0.4307 MLRFLATGSNISHPFPHTAVIKALRVFTSTTCSSICVTQTKVEVEDDKGKWSDATELLRKWGCSDDDLVRIFSRCPSLRNADPTQVQSKLCLLSDLGLRASELVKIVNCRPRFFQSRINSYLEERIGHLTSLFESREVLQKAIVRNPSLLLSDGRYNVKATVELYEKLGVKKGDLVQMLLLRPTVISRTSFDAEKLEYLSRTGLTVDSKMYKYVVTLIGISRVETIREKVANFEKFGFSEEEIFGLVGRSPNVLTLSTDKVQRNMTFILGTMKLDAKMVLKQPYLLYANVDTVLKPRVLLALKIQDMDSKWQIIGPTIVSVLRMQETRFLDLFVKCHGEDVANELMDFYKRTKEVKRLGESSKKCSRRGFPF* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0270 372 Gene3D Transcription termination factor 3, mitochondrial 135 344 IPR038538 -
Pvu10g0270 372 PANTHER CGI-12 PROTEIN-RELATED 16 372 IPR003690 GO:0003690|GO:0006355
Pvu10g0270 372 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 16 372 - -
Pvu10g0270 372 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Pvu10g0270 372 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Pvu10g0270 372 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Pvu10g0270 372 SMART mt_12 69 99 IPR003690 GO:0003690|GO:0006355
Pvu10g0270 372 SMART mt_12 276 308 IPR003690 GO:0003690|GO:0006355
Pvu10g0270 372 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Pvu10g0270 372 Pfam mTERF 56 126 IPR003690 GO:0003690|GO:0006355
Pvu10g0270 372 Pfam mTERF 114 330 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pvu10g0270 mTERF 1.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0270 K15032 - gmx:100799629 617.076