Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0268 ATGCCTTACGCTTCATCATCCTCAAAATCTAAACCCCGATGGATATACGATGTGTTCATCAGTTTCCGGGGCGAAGACACTCGTAAGAACTTCGTTTCTCATCTCTATTCTGCTCTTGCAAATGCCGGTGTCAACACTTTTCTGGACGACGAGAAGCTTGCCAAGGGACAACAGCTGAAAACAGAACTGTGGCATGCAATAGAAGGGTCTCAAATTTCCGTTGTTGTTTTCTCCAAAAACTACATTTACTCTACATGGTGTCTCGACGAACTCGTCAAAATCATGGAATGCCATTCTTCTAGAGGTCAAGTAGTTTTGCCCGTATTTTACGACGTTTTCCCTTGGTTTCTACGTAGACTGCAGGATGTTTCTTTCGAAGTCATTTTTGAAAAAGATAGTGACCTCCACCTCGTGAAACAATGGAAGAATGCACTGAGTGAAGCAGCAAGTTTTGCAGGTTGGGATGTTTCACGTTATAGAAATGAAAACTTGGTTGTGAAGGAAATTGTTAGTGAAGTTTTGGAAAAATTAGATAGAACATACATGTCTATTACAGAGTTTCCAGTTGGATTGGAACTTCGTGTGGAACACTGTATTGGCTTTCTTAGAAAGCAAACAAGAGGAGCTTATATATTAGGGATTTGGGGAATGGGAGGGATTGGTAAAACAACCATAGCCAAAGCCATCTACAATGAAATTCGATATGAATTTAAACATAGAAGTTTCCTAGCAAATATTAGAGAAGTTTGGCAAAGAGATCAAGGGAAGATTGATTTACAAGAACGACTTCTTTCAGATATCCTTAAAACAGAAAAGATCAAGGTTTATAGCATTGATTGGGGAAAAGCTATGATAAGGGAAACGCTTGCCACAAAAAGAGTACTAGTTGTGCTCGATGATGTGAACACATTTGGACAATTAGATGAACTATGTGGAAATGGTAATGGGATTGTTGAAGGAAGCGTAATAATCATTACAACAAGAGATGTACGTCTACTCAATGTGCTTGATGTTGACCATGTATATGAAGTGGAGGAAATGAATGAGATTGAGTCCCTTGAGCTTTTCAGTTGGCATGCTTTTAAGGAAGCAAATCCACCAGAAGATTTCCTTGAACACTCAAAGCAAGTAGTCACTTACTGTGGATCACTACCTCTAGCTCTTGAAGTTCTTGGATCTTATCTATACAAGAGAAGAAGAAAAGAGTGGGAAAGTGTATTATCAAAACTTAAAGAAATACCAAATGATAAGATACAAGAGAAATTGAAAATAAGCTATGATGGTTTAACCGATGATATGGAGAAGGACATATTCCTTGACATATGCTGCTTCTTTATCGGTAAGGACAGAGCCTATGTCACAGAGATACTCAATGGTTGTGGACTTCATGCTGAAATTGGAATAACAGTCCTGGTAGAAAGGAGCCTCATAAAAGTTGAAAAGAATAACAAACTTGGAATTCATGATTTGCTACGAGACATGGGAAGAGAAATTGTTCGTCAAAGTTCACCACTAGAACCACAGAAGCGCAGTCGATTGTGGGTTCATGATGATGTACTTGGTATATTGACAGAAAATACTGGAACAGGAGTGATTGAGGGATTGGCTTTGAAGATGCAAAGAACCAGCGGAGTTTGTTTCAGTACTGAAACATTTGAGAAAATGAAGAGACTGAGACTTTTGCAACTTGATCATGTACAATTAGCGGGAGATTATGGGCATCTTCCCAAACAACTGAGATGGCTTCATTGGAAAGCATTTTCATTAACACACATTCCTGAAAACTTTTATCAGGAAAACATAGTTGCTATTGACTTAAAATACAGTTATCTTAAACTAGTATGGAAGGTGCCCCAGTTTCTGGAGAGGCTAAAATTTCTCAATCTTAGTCATTCCAAGTACTTATCAAAGACCCCAGATTTTTCAAAACTACCAAATCTTGAGAAGCTCATTCTCAAAGATTGTCCAAGCTTGTATGAAGTACACCATTCAATTGGAGATCTAAATAACCTCCTTCTATTAAACTTGAAGGATTGTACATGCCTTGGCAATCTTCCGATGGTTATCTATAAGTTAACGTCATTACAAACACTCATCCTTTCTGGTTGTTCAAATATTGACAAGTTAGAAGAAGCCATAGGGCAGATGGAATCCTTAACAACTCTAATTGCAGACAATACTAGTCTAAAACAAGTACCTTTTTCCATAGTAAGATCCGAAAAGATTGGATATATATCCCTTTGTGGATATGAAGGATTGGCACGAAATGTATTTCCTTATCTCATATGGTCTTGGATGTCACATACAGGAGGACTTTCAGCCTGTATTCAACCATTTGGGATCATGCCAACATCTATAGTCTCCATGGATATACAGGATACTAATTTGGTTAATCTATTATCGAAGCTGAGTGACCTTTCAAAACTTCGAAGTATTTCTGTACAATGCGACTCAGATTTTCAGATAACTCAAGAACTAAGAATAGTTCTGCATGAGTTATGCAATGTAAACCTTTCTGAATCTGAAAATGCATATCTATCACAAAATTCAGAAAATTCTATGGCATCGTTTTTGATTGGAATGGGAAGCTACCACCAAGTCTTCGATATGCTTAGCAATAGCATATTAAAGGTATTGAGAACCAATAGTTCCACTGATTTTGTGCTTCCAGGGGACAATTATCCTTATTGGTTAGCCTATACAGGAGAAGGTTATTCAGTACCTTTTCAAGTTCCTGAAGATAGTGATTGTCGCATGAAGGGAATGTTGTTGTGTGTTGTTTATTCATCAACCCCTGAAAACATGGCAACTCAAAGTCTTACTAGTGTCTTCATCTTTAATTACACAAAGTGCACCATTCAGATATATAAGCAAGAAACAACAATGTTTTTTACTGATGAAGATTGGCAGGGTGTAATATCAAATCTAGGACCCGGAGACAACGTGGAGATTTTTGTAGGAGTTGGTCATGGAATCACTGCTAAGAAAACAGCTGTGTATCTGATATATGGTCACTCAATTACAATGAGAATGGAGTCACTTGGACTGAGTGCACAATCATTACATGAGCTGAGTGTGACTCTGTGGCCTGAATTAAGTGCACAACCATCCACTGGTGTGGAAATGGAGCCCTCAAAGAAGCCGAAGAAAAATATATTTGCAAAAATGACAAACAAAGTGAGAGTATGTGGATGTTTGAAGTAG 3204 0.3795 MPYASSSSKSKPRWIYDVFISFRGEDTRKNFVSHLYSALANAGVNTFLDDEKLAKGQQLKTELWHAIEGSQISVVVFSKNYIYSTWCLDELVKIMECHSSRGQVVLPVFYDVFPWFLRRLQDVSFEVIFEKDSDLHLVKQWKNALSEAASFAGWDVSRYRNENLVVKEIVSEVLEKLDRTYMSITEFPVGLELRVEHCIGFLRKQTRGAYILGIWGMGGIGKTTIAKAIYNEIRYEFKHRSFLANIREVWQRDQGKIDLQERLLSDILKTEKIKVYSIDWGKAMIRETLATKRVLVVLDDVNTFGQLDELCGNGNGIVEGSVIIITTRDVRLLNVLDVDHVYEVEEMNEIESLELFSWHAFKEANPPEDFLEHSKQVVTYCGSLPLALEVLGSYLYKRRRKEWESVLSKLKEIPNDKIQEKLKISYDGLTDDMEKDIFLDICCFFIGKDRAYVTEILNGCGLHAEIGITVLVERSLIKVEKNNKLGIHDLLRDMGREIVRQSSPLEPQKRSRLWVHDDVLGILTENTGTGVIEGLALKMQRTSGVCFSTETFEKMKRLRLLQLDHVQLAGDYGHLPKQLRWLHWKAFSLTHIPENFYQENIVAIDLKYSYLKLVWKVPQFLERLKFLNLSHSKYLSKTPDFSKLPNLEKLILKDCPSLYEVHHSIGDLNNLLLLNLKDCTCLGNLPMVIYKLTSLQTLILSGCSNIDKLEEAIGQMESLTTLIADNTSLKQVPFSIVRSEKIGYISLCGYEGLARNVFPYLIWSWMSHTGGLSACIQPFGIMPTSIVSMDIQDTNLVNLLSKLSDLSKLRSISVQCDSDFQITQELRIVLHELCNVNLSESENAYLSQNSENSMASFLIGMGSYHQVFDMLSNSILKVLRTNSSTDFVLPGDNYPYWLAYTGEGYSVPFQVPEDSDCRMKGMLLCVVYSSTPENMATQSLTSVFIFNYTKCTIQIYKQETTMFFTDEDWQGVISNLGPGDNVEIFVGVGHGITAKKTAVYLIYGHSITMRMESLGLSAQSLHELSVTLWPELSAQPSTGVEMEPSKKPKKNIFAKMTNKVRVCGCLK* 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0268 1067 SUPERFAMILY "Winged helix" DNA-binding domain 416 522 IPR036390 -
Pvu10g0268 1067 Gene3D - 10 182 IPR035897 -
Pvu10g0268 1067 Gene3D Ribonuclease Inhibitor 533 882 IPR032675 -
Pvu10g0268 1067 SMART till_3 15 151 IPR000157 GO:0007165
Pvu10g0268 1067 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 19 1002 - -
Pvu10g0268 1067 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 1002 IPR044974 GO:0006952
Pvu10g0268 1067 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 441 IPR027417 -
Pvu10g0268 1067 PRINTS Disease resistance protein signature 211 226 - -
Pvu10g0268 1067 PRINTS Disease resistance protein signature 288 302 - -
Pvu10g0268 1067 PRINTS Disease resistance protein signature 381 395 - -
Pvu10g0268 1067 PRINTS Disease resistance protein signature 690 706 - -
Pvu10g0268 1067 Pfam TIR domain 16 185 IPR000157 GO:0007165
Pvu10g0268 1067 ProSiteProfiles TIR domain profile. 14 177 IPR000157 GO:0007165
Pvu10g0268 1067 SUPERFAMILY L domain-like 537 838 - -
Pvu10g0268 1067 Gene3D - 346 430 IPR042197 -
Pvu10g0268 1067 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 154 IPR035897 -
Pvu10g0268 1067 Pfam NB-ARC domain 194 422 IPR002182 GO:0043531
Pvu10g0268 1067 Gene3D - 183 341 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0268 Pvu-Chr10 3811658 3815819 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0268 2 736 WRKY Transcription Factor Family AT4G12020 31.481 2.77e-89 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0268 - - vun:114165127 1862.43