Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0265 ATGGAATTGGAATCTTCATCGCCCAAACTCCCACGGATGTACGATGTGCTCATCCACTTTAATGGAGAAGACATCCAAAGGAAATTTGTTTCTCATCTCGATTCTGCCCTCTCTGCTGTTGGCTTCACCACTTTCCTTCACCACCCCAATGCACTCAACCCAATTCACATCCAACAACCTATTCTCAATCTCTGTCGAGTAGCAATTGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAACTCCAACAAATCCTTAAATGGCACCAAACTTACTGCCGACATGTTCTGCCTGTTTATTACGAAATTGAGCCATCTGATGTACGTCTTCAGAAGGGTGATTTCGGAAAAGCCTTGCAAGCAACTGCACACCAAACGTTTTCAGGACGAGAACTGGAGCATGGCATGTCTAGGTGGAGCCACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGAATGAGAGCAATTACAGGAGTGATGCAGAACTAGTGGACAAAATTGTTAAGAGCGTTCTTAATTTACCAGTCTTGTCTGCTACTAAATTTCCAGTTGGATTACAATCCCGTGTGGAAGATGTGATTCTAACCATAAAAAACAAATCCACGCAAGTTTGTACCATAGGGATATGTGGAATGGATGGATCTGGTAAAACCACCCTTGCCAAAGCCATCTACCGTCAAATTCATGGTTTATTCACGGAGAAAAGTTTCGTCGAAGATATTGCACAAGTTAGTCGAACGAGAGGGGAAGTCCATTTACAAGGACAACTTCTTTCAGATGTCCTGAAAACAAAGGTCGAGATAGATAGCGTTGAGATGGGAAGAAGTATGATTTTGGAAAGACTTTCTGGGAAAAGGGTGCTCATTGTACTTGACGAAGTGGATCTCTATTGTCCATTATTATTAGACCTATGGGAAAGTCGAGCATGGTTCGGTGAAGGAACTGTAATAATCATTACAACCAGAGATGAAGGCCTACTGAAGATACATCAAGTTGATTCTGTTGTTCGTATAAAGCTGAACGAGAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAACCAAAACCAAAAGAAGAATACAATTTCCTTGCAAGAAGAGTAGTTGCTTATTGTGGAGAACTACCTCTTGCTCTTGAAGTCATTGGAACTTATTTATATGAAAGGACGGAAAAAGAATGGAACATAGTATTGTCAAGATTAGAGAAAATTCCCCGCTATGAATTTAGACTGATGTTGAAAATAAGCTTCGACGGTTTAGATAGACAAATGGAAAAAGATTTATTCCTTGATGTATGTTGTTTCTTTGTTGGCAAAGACAGAGACTATGTTACCAATATCCTAAATGACCGTGGAGTAGACGCTGATAGTGGAATAAGAGTTCTGATAGAGCGTAGCTTCATACAAGTTAAAAAGAGCAACAAATTGGGAATACATCCTTTGCTACGAGAATTGGGAAGAGAAATTATTGAAATATCAAGAAAGGAATCTGATGAGAATGGGGAATATGTATTGACAGATAATACAGGGACAGAAGCCATAGACGGATTGTTTGTGAAACTGCGTTCATCCAGAAGAGATTACTCCGAAGCTTATCCTTTAGAGATAAGAGACGGATCAACACTGGTGCAACCAGATCAAATACAACTCCCTGGGCATTATGAGTATCGTTCTAAGAATCTGAGATGGATGAGTTTGCACGGGTTTCATTCAGAATACCTACCTAACGACTTTTATCCGCATGATGCAATAGCGATCGATTTAAAACACAGTCTTCTTCGATTCGTCTGGAAAGAACCCAAGGTTTTGAGGTGGCTAAAAGTTCTTAATCTTAGTCACTCTGTGTACTTGACAGAAACCCCTGACTTTTCCACACTACCAAGTCTTGAACAGCTCATCCTCAAAGATTGTCCAGCATTGGTGGAAGTACACCCATCTATTGGATGTCTCTCCTATCTTACATTGCTAAATTTGAAGAACTGTACAAGTCTAAGCAATCTCCCAAGAGAGATATATAAGTTAGAATCTTTAAATACTCTCATTCTCTCTGGCTGTTTGAAAATTGACCTATTGGAAGAAGATATAATGCAAATGGAAACCTTGATAACACTAATTGCTGAAAACACAGCTGTGAAACAAGTGCCTTTTTCAGTTGTAAGCTCAAAAAGCGTTGGATATATTTCCCTACGTGGATTTAAGGGATTATCTCGTAATCTTTTTCCTTCTATCATTCGGTCTTGGATGTCACCAACAATGAATCCCTTATCTTATATTCATTCATTTTACACGGATATGGAGGATAATAACTGGGGTTATATTGCGCCATTGCTTAGCACCCTTCCAAATCTTCGAAGTGTTTTGGTGCAATGTGACTTCCAGATTCAACTATATAAGCAAGTAGAAACTATTCTGGTCGAATATGATCTAAATACTACAGAACCAGGAATTTTGAAGCATAACTTCAGGTCTTCTTTGATTGGTGTTGGAACATACAATGAATTCTTCAATACTATCAGCAATAACATATCTGAGACATTGGGAAGGAGTGACTCTAGTGATGTTGCACTCCCGGGTGACAATGATCCTTATTGGTTGAGCCATAAGAGTGAGGGGCATTCTGTTTCTTTCACTGTAGCTCAAGATCGTGACATGAAGGGAATGGCTTTGTGGGTTGCTTATTTATCAAATTCTGAAATCATTGAACCTGAATGTCTTGCTAGTGTCTTGATTGTTAATTACACAAAGTGCACATGCCAGATACACAACCGAGGGACAGTAGTTTCCTTTAATGATGAAGATTGGCATGGCATAATGTCAAATTTAGGATATGGAGACAAGGTGGAGATTTTTGTGAGTTTTGGTCATGGATTGGTGGTCAAGAACACAACTCTCTATTTGATATATGGAGAATCAAATGACTTTGAAAGAGAGCCCGCCAAAGAAAAATTACTCCATTAG 2976 0.3948 MELESSSPKLPRMYDVLIHFNGEDIQRKFVSHLDSALSAVGFTTFLHHPNALNPIHIQQPILNLCRVAIVVFTKTYSQSAWCLHQLQQILKWHQTYCRHVLPVYYEIEPSDVRLQKGDFGKALQATAHQTFSGRELEHGMSRWSHALTKAANFFGWNESNYRSDAELVDKIVKSVLNLPVLSATKFPVGLQSRVEDVILTIKNKSTQVCTIGICGMDGSGKTTLAKAIYRQIHGLFTEKSFVEDIAQVSRTRGEVHLQGQLLSDVLKTKVEIDSVEMGRSMILERLSGKRVLIVLDEVDLYCPLLLDLWESRAWFGEGTVIIITTRDEGLLKIHQVDSVVRIKLNENESLELLSWHAFREPKPKEEYNFLARRVVAYCGELPLALEVIGTYLYERTEKEWNIVLSRLEKIPRYEFRLMLKISFDGLDRQMEKDLFLDVCCFFVGKDRDYVTNILNDRGVDADSGIRVLIERSFIQVKKSNKLGIHPLLRELGREIIEISRKESDENGEYVLTDNTGTEAIDGLFVKLRSSRRDYSEAYPLEIRDGSTLVQPDQIQLPGHYEYRSKNLRWMSLHGFHSEYLPNDFYPHDAIAIDLKHSLLRFVWKEPKVLRWLKVLNLSHSVYLTETPDFSTLPSLEQLILKDCPALVEVHPSIGCLSYLTLLNLKNCTSLSNLPREIYKLESLNTLILSGCLKIDLLEEDIMQMETLITLIAENTAVKQVPFSVVSSKSVGYISLRGFKGLSRNLFPSIIRSWMSPTMNPLSYIHSFYTDMEDNNWGYIAPLLSTLPNLRSVLVQCDFQIQLYKQVETILVEYDLNTTEPGILKHNFRSSLIGVGTYNEFFNTISNNISETLGRSDSSDVALPGDNDPYWLSHKSEGHSVSFTVAQDRDMKGMALWVAYLSNSEIIEPECLASVLIVNYTKCTCQIHNRGTVVSFNDEDWHGIMSNLGYGDKVEIFVSFGHGLVVKNTTLYLIYGESNDFEREPAKEKLLH* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0265 991 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 973 IPR044974 GO:0006952
Pvu10g0265 991 SMART till_3 13 153 IPR000157 GO:0007165
Pvu10g0265 991 Gene3D - 343 427 IPR042197 -
Pvu10g0265 991 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 437 IPR027417 -
Pvu10g0265 991 SUPERFAMILY "Winged helix" DNA-binding domain 417 497 IPR036390 -
Pvu10g0265 991 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 156 IPR035897 -
Pvu10g0265 991 Gene3D - 175 340 IPR027417 -
Pvu10g0265 991 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 973 - -
Pvu10g0265 991 Pfam TIR domain 14 180 IPR000157 GO:0007165
Pvu10g0265 991 SUPERFAMILY L domain-like 560 793 - -
Pvu10g0265 991 Gene3D - 11 174 IPR035897 -
Pvu10g0265 991 PRINTS Disease resistance protein signature 210 225 - -
Pvu10g0265 991 PRINTS Disease resistance protein signature 285 299 - -
Pvu10g0265 991 PRINTS Disease resistance protein signature 378 392 - -
Pvu10g0265 991 PRINTS Disease resistance protein signature 678 694 - -
Pvu10g0265 991 SMART AAA_5 207 346 IPR003593 -
Pvu10g0265 991 CDD AAA 213 333 - -
Pvu10g0265 991 Pfam NB-ARC domain 193 413 IPR002182 GO:0043531
Pvu10g0265 991 Gene3D Ribonuclease Inhibitor 553 820 IPR032675 -
Pvu10g0265 991 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0265 Pvu-Chr10 3765682 3769652 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0265 14 724 WRKY Transcription Factor Family AT4G12020 27.628 3.95e-60 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0265 - - vun:114165123 1301.58