Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0263 ATGGCGTCTTCATCATCCAAACTCCCATGGATGTACGATGTGCTCATCAACTTTAATGGAGAAGACGTTCAAAGGAAATTTGTTTCTCATCTCGATTCTGCCCTCTCTGCTGTTGGCTTCACCACTTTCCTTCACCACCCCAATGCACTCCACCCAATTCACATCCAACAACCTATTCTCAATCTCTCTCGTGTAGCAATTGTTGTTTTCACCAAATCCTATTCTCAATCTTCTTGGTGTCTTCATCAGCTTCAACAAATCATTAGATGGCAAGAAACTTATTGCCGACATCTTCTGCCCGTTTATTACGAAATTCTGCCATCTGATGTACGTCTTCAGAAGGGTGATTTTGGAAAAGCCTTCAAAGCAACCGCAGGACAAGAACTGGAGCATGGCATGTCCAGGTGGAGCCACGCACTCACCAAAGCTGCAAATTTATTTGGATGGGATGAGAGCAATCACAGGAGTGATGCTGAACTAGTGGACAAAATTGTTAAGACCGTTCTTAATTTACAAGTCTTGTCTGCTACTAAATTTCCAGTTGGATTACAACCCCGTGTGGAAGATGTGATTCAAACAATAAAAAGTAAATCCACTCAAGTTTGTACCATAGCGATATGTGGAATGGAAGGATCTGGTAAAACCACCCTTGCCAAAGCCATCTACCATCAAATTCATGATTCATTCAAGGATAAGAGTTTCATTGAAGATATTGCACAAATTAGTCGAACGAGAGGGGACATTCATTTACAAGGACAACTTCTTTCAGATGTGCTAAAAACAAAGGTGGAGATACATAACGTTGACATGGGAAGAAGTATGATTCGGGAAAGACTTTCTGGGAAAAGGGTGCTTATTGTACTTGACGAAGTGGATCTCTATTGTCCATTATTATTCGACCTAAGGGAAAGTCGTGCATGGTCCGGTGAAGGAACTGTAATAATCATTACAACCAGAGATGAAGACCTACTGAGGATACATCAAGTTGATTCTGTTTATAGTATAAAGCCAATGAACGAAAATGAGTCCCTTGAGCTTCTTACTTATTGTGGAGGACTACCTCTTGCTCTTGAAGTCATTGGAAGTTATTTATATGAAAGGACCAAAGAAGAATGGAACAAAGTAGTGTTAAGATTAAACAGTATTCCCCTGAATGAAGTTTCACAGATATTGAAAATAAGCTTCGACGGTTTAGATACTCAAATGGAAAAAGATTTATTCCTTGATGTATGTTGTTTCTTTGTTGATAAGGCCAGAGACTATGTTACCAATATCCTAAATAACGGTGGAGTATTATACGCTGACAGTGGAATAAGAGTTCTGATAGAGCGTAGCCTCATACAAGTTAAAAAGAACAACAAATTGGGAATGCATCCTTCGTTACGAGAAATGGGAAGAGAAATTATTGATGAAATTTCAAGAAAGGAATCTGTGAAGAGCAGTCCACGGTTCATTGATGAGGATGGGGAATATGTATTGACAGATAATACAGGGATAGAAGCCATTGACGGATTGTTTGCGAAACTGCATTCATCCAGAAGAGATTATCTTTTAAAGAAAAGATACAGATCAACACTGCTGCAACCAGATCAAATACAGCTCACTGGAAATTATGAGTATCGTTCTAAGAATCTGAGATGGATGAGTTTGCACGGGTTTTGTTCAAAATACCTACCTAATGACTTTTATCTGCATGATGCAATAGCGATCGATTTAAAACACAGTCTTCTTCGATTCGTTTGGAAAGAACCCAAGGTTTTGAGGTGGCTAAAAGTTCTTAATCTTAGTCACTCCGTGTACTTGACAGAAACCCCTGACTTTTCCACACTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGTCCAAGATTGGTCCAAGTACACCCATCTATTGGTTGTCTCTGCTATCTTACATTGCTAAATCTGAAGAACTGCATAAGTCTAAGCAATCTCCCCAGAAAGACATACAAGTTAGAATCTTTAAATACTCTCATTCTCTCTGGCTGTTCGAAAATTGACCTGTTGGAAAAAGATATAATGCAAATGGAAACCTTGATAACACTAATTGCTGAAAACACAGCTGTGAAACATGTGCCTTTTTCAGTTGTAAGCTCAAAAAGCATTGGATATATTTCCCTACGTGGATTTAAGGGATTGTCTCGTAATCTTTTTCCTTCTATCATTCGGTCTTGGATGTCATCAACAATGAATACCGTATCTTATACTCATTCATTTTGCACGGATATGTTGGAGAATAATTGGAATTATATTGCGCCACTGCTTAGCACCCTTCCAAATCTTCGAAGTGTTTTGGTGCAATGTGACTCCGAGTTTCAACTATCTGAGCAAGTGAAAAATATTCTGGTCGACCATTTTGCGCATATTACAGAATCAGGAATTTCAAAGCAGCACTTCAGGTCTTCTTTCATTGGTGCTGGAGTGTACCATGAATTCTTAAGTGCTGCCAGCGATAACATATCTAAGGTATTGGCAAGCAGTGAGACATGTGATGTTTCTCTCCCAGGTGACAATCATCCTCATTGGTTGGCCCATATGGATGAGGGACATTCTGTTTCTTTCAGTGTGCCTCCAGATCGTGGCATGAAGGGAATGGTTTTGTGTGTCGGTTATTTATCAACCCATGAAATCGTGGCAACTGAATGTTTTAGAAGTGTCTTAATTGTTAATTACACAAAGTGCACATTGCACATACACAACCATGGGACAGTAATTTCCTTTAATGATGTAGATTGGCAAGGTATAATGTCAAATTTAGGATCAGGAGACAAGGTGGAGATTTTTATAAGTTTTGGTCATGGATTGGTAGTCAAGAACACAGTTATTTATCTGATATGTAGTGAATCAAATGACTTAGAAAAGAAGCCTGCGCTAAAGAAAAATCCCCTCGTTAGATTCATAAAGAAAATTGTAATGTGA 2937 0.3888 MASSSSKLPWMYDVLINFNGEDVQRKFVSHLDSALSAVGFTTFLHHPNALHPIHIQQPILNLSRVAIVVFTKSYSQSSWCLHQLQQIIRWQETYCRHLLPVYYEILPSDVRLQKGDFGKAFKATAGQELEHGMSRWSHALTKAANLFGWDESNHRSDAELVDKIVKTVLNLQVLSATKFPVGLQPRVEDVIQTIKSKSTQVCTIAICGMEGSGKTTLAKAIYHQIHDSFKDKSFIEDIAQISRTRGDIHLQGQLLSDVLKTKVEIHNVDMGRSMIRERLSGKRVLIVLDEVDLYCPLLFDLRESRAWSGEGTVIIITTRDEDLLRIHQVDSVYSIKPMNENESLELLTYCGGLPLALEVIGSYLYERTKEEWNKVVLRLNSIPLNEVSQILKISFDGLDTQMEKDLFLDVCCFFVDKARDYVTNILNNGGVLYADSGIRVLIERSLIQVKKNNKLGMHPSLREMGREIIDEISRKESVKSSPRFIDEDGEYVLTDNTGIEAIDGLFAKLHSSRRDYLLKKRYRSTLLQPDQIQLTGNYEYRSKNLRWMSLHGFCSKYLPNDFYLHDAIAIDLKHSLLRFVWKEPKVLRWLKVLNLSHSVYLTETPDFSTLPSLEQLILKDCPRLVQVHPSIGCLCYLTLLNLKNCISLSNLPRKTYKLESLNTLILSGCSKIDLLEKDIMQMETLITLIAENTAVKHVPFSVVSSKSIGYISLRGFKGLSRNLFPSIIRSWMSSTMNTVSYTHSFCTDMLENNWNYIAPLLSTLPNLRSVLVQCDSEFQLSEQVKNILVDHFAHITESGISKQHFRSSFIGAGVYHEFLSAASDNISKVLASSETCDVSLPGDNHPHWLAHMDEGHSVSFSVPPDRGMKGMVLCVGYLSTHEIVATECFRSVLIVNYTKCTLHIHNHGTVISFNDVDWQGIMSNLGSGDKVEIFISFGHGLVVKNTVIYLICSESNDLEKKPALKKNPLVRFIKKIVM* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0263 978 SUPERFAMILY "Winged helix" DNA-binding domain 386 473 IPR036390 -
Pvu10g0263 978 SUPERFAMILY L domain-like 529 774 - -
Pvu10g0263 978 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 409 IPR027417 -
Pvu10g0263 978 ProSiteProfiles TIR domain profile. 10 172 IPR000157 GO:0007165
Pvu10g0263 978 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 951 IPR044974 GO:0006952
Pvu10g0263 978 SMART till_3 11 146 IPR000157 GO:0007165
Pvu10g0263 978 SMART AAA_5 200 339 IPR003593 -
Pvu10g0263 978 Gene3D - 330 399 IPR042197 -
Pvu10g0263 978 Gene3D - 4 168 IPR035897 -
Pvu10g0263 978 PRINTS Disease resistance protein signature 203 218 - -
Pvu10g0263 978 PRINTS Disease resistance protein signature 278 292 - -
Pvu10g0263 978 PRINTS Disease resistance protein signature 350 364 - -
Pvu10g0263 978 PRINTS Disease resistance protein signature 656 672 - -
Pvu10g0263 978 Pfam NB-ARC domain 186 347 IPR002182 GO:0043531
Pvu10g0263 978 Pfam TIR domain 12 170 IPR000157 GO:0007165
Pvu10g0263 978 CDD AAA 181 326 - -
Pvu10g0263 978 Gene3D - 169 329 IPR027417 -
Pvu10g0263 978 Gene3D Ribonuclease Inhibitor 529 686 IPR032675 -
Pvu10g0263 978 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 15 951 - -
Pvu10g0263 978 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 149 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0263 Pvu-Chr10 3751033 3754735 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0263 12 729 WRKY Transcription Factor Family AT4G12020 26.879 4.60e-57 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0263 - - vun:114165880 1278.46