Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0262 ATGGTGAGCATTGTATCTGATTTAGCAAAGTCAAATTTGGAGAAATTGATTAACGCAACACTGGAACAATCGCGTTATATTTGTTGCTTCACATTTATTACTAGAGAATTTGAAAATGAAAGAAAAAATTTGATACCAAAAAAGGAAACTTTAGAAGAGTATGTTAGAGTGGCAAATAGAAGAAATGATAACATACGAAGAGAAGTCAAAATTTGGCAAAAACAAGTTGAAGACCTTATTGAAGAAGACACCAAAATAAAAATGACATGCTTTTTTGGTAGGTGTCCTAACTTCAAATGGCAGTATAGTAGGGGGAAGGAATTGGAAAGTAAGACAGAAGAGATTAAAAGACTCATGCAATGCAACTTTGAAAATGTTGGAATCATTCGTGATGTTCCAGATATTGAATATCATTCTTCTCAAAATTACATATCTTTTGAAAGTAGAAAGTTAAAATTTGAAGAACTCTTTAATGCATTGACAAATGACAACAACTATATGATCGGATTGCAAGGGATGGGGGGCACAGGTAAAACAACATTAGCAAAAGAGATTGGTAAGAAGCTTAAGAAATCAAAATTTTTTGATCAAGTCATTGATACTACAGTATCTAATACCCCTGATACAAAGAAGATTCAGGATGATATTGCAGGACCATTAGGACTACCATTGAAGGATTATACTGAATCAGAGAGACCTAGAAGGTTGTGGGATAGATTGACCAATGGTGAGAAAATTCTTGTAGTTCTAGATGATGTGTGGGGGGATATCAATTTTGAAGAAATAGGTATTCCATTTAAGGACAACCACAATGGTTGCAAAATTCTTGTAACAACTCGCAATATGAGCATATGCCATAAAATGGAATGTGAAAAGATAATTCAACTAGATATCTTACCAGAGGAAGAGGGGTGGATATTGTTCCAAAAGCATGCTGGTTTAAGTGATACTTCCTCTAAAAGTGTTCTAAATAAAGGTCATAAAATTTCCAAAGAATGTAAAGGATTGCCAATTGCAATTGCAGTTATCGCTGGTAGTTTAAAGGGCCAAACACGTCCAAAAGAATGGGATGTGGCCTTAAAATCCTTGCAAAAGTCCATGCTCGTACGTGATGATGATGAAAATTGGAGTAAAGTTTATGCATGTCTGAAGTATAGTTATGACAATATCAAGAATAAAACAGCTAAGAAATTGTTCCTTTTGTGTTCTGTGTTTCAAGAAGATGAAGAAATATCTGAAGTACTTTTAGTCAGGCTTGCCATAGGAGCAGGTCTCATTGAGAAAAATGTTGATGATTACAATTATGATGCATGTCGTAATGAAGTTATTGCAGCAACATATAAACTCATAGATTCATGTTTATTATTGAATGGAGAATTTGGAGGTGTGAAAATGCATGACTTGGTTCGTGAAGTGGCTTTATCAATAGCTAACAAGGAGATTTTGGCAATGAATACATCTAACAAGAATGAAATGACAATGGTTGAAAAGGGGAAGAACATCAAATATTTGTTGTGTGAAGGCAAGAGCACGGATGTGTTTTCCTTCAAATTTGATGGATCTAAACTTGATATTCTTATTGTCTACTTAAATGAATATGGTTATGTGGAAGTACCAAATTCATTCTTTGAAAATATAGCAGGGCTTCAAGTTTTGTACTTATCAAATACCCATATATATGGAGAAGCAACTTTGTTATTACCACAATCAATTCAATTGTTAACCAATATTCGATCTTTATACCTTGAAGGATTCACCTTGGGTAACATATCTATGCTTGGAATCCTAAAGGACCTTCAGACTCTTGATTTGGTTAGGTGTTCAATGGATGAATTGCCTAGAGAGATTTCAAAATTGGTGAAACTTAAATTATTGAACTTGAAACTTAATAATTTTGAATGGAACAATCCATATGAAGTGATTGAAAGTTGCACTTCATTGGAAGAATTGTATTTGATTGAATTACTTCATTTAAGGCAACTTCGAGGAGTATGGAAAAACCTCATACCTGAGATTATTTTTCCTGATGATGAAGGTGCGACTAATCTAGTTGAGATTGGTTTATTTAATATTTCACAACTCAGATGCCTAATTGACAATACTGATTCTCGTGTGCAAAATGCCTTATCTAAGTTGGTCGTACTTGAACTTGTACAAATGAAGAATTTGAAAGAAATATGTAGTGGACCCCTTCCCTTTGATCTTCTGAAGAGTTTAGAAAAATTCATTCTATGTTATTGTATAAATTTTGAAGGCGCATTGTTAAAGAGCAAGATATCCTTCTGCAATCTTCAATGCTTGACTATACGGGGATGCCCAATGTTGACATCTCTGTTTGAGTTGTCGACCACACAAAGTCTACTATTGTTGGAGAACTTGTGGATAGATGATTGTGAAAAACTCAAAAGTATAGTTAGAGAGGAAAACGAAAGGAAAAATTTAGAGGAAGAAATAGTTTATGATCATAATCATAACAAGAATTTTACTTCAACCTTTCCAAATTTAACCACTCTTTGTATCAACAAATGTCCCCAATTAATCTTTATACTTCCAATTGCTATTGCTCAAAATGTTCCAAGACTTGAATGTATGGATATAAGGGAGTGTACTGGGCTAAAATACTTATTTGGCTCATACCAACATAAGTATAATGAGGAAGATTTACATCATGAGTTAAAAGATGTCATATTCACTACTCTAAGTCAAGTTTATCTAGAAGACTTGCCTAATTTTGAGGACATTTTTTCAGAATGTAATGAACTCTTCTCTCTCAATGGTATGTTTCTCACCCCTTCTTATCTTACATGTTTTCTATTTTTTTTTATGCATGTAACTTATAATGTAAAGGTGAATGACTCCAATGAAAATGATTTGATTGGACAAACTATGGATGTATCTTTGAAAAACATAGCATTGAATAATACGCCTCAAACACCTGTGAGCTCCAAGATTTTTTTTACTCTACAAAACGTTACAGTGTTAGTAATTGAGGACTATGGAAATGCTGAAGTAATATTTTGTGCGTCTATGTTGGAATGCTTACCATATTTGCATACACTTGTCATATCTGGATGCAATGAATTAAAACAGATAATTGGTGAGGATACAAAGAATCAGAGAAAGCCATTTTTTCCAAGGCTAAAAGCACTTTTGCTAGAAGAATGCAACAAATTGAAATGTGTCTTTCCCATTTCAACTTCCAAAATGCTACCTAAGTTAGAAGTTCTGATAATCATAAAAGCATGTATGCTAGAGGAAGTATTCCAAGGGAACAGTGATGAAAAAGTTGAGATTCCAAATTTGGAAACTGCAGTATTTGTTGAACTTCCAAGCCTTTGTCAGAAGACTGAATTTCTTACTGTAAAAGATTGTTGGGTGAAGAATTGTCCAAAACTCTCCTCCTTGTCTTCATCCCTTCAAAGTTTCCAAGATATTTTTAATTCTATCGAAGCCGAAGAGATTTGCAATCAGAATCCAACTACAGAATGTACAAAAGACTTATTAATTGGGACTGAAGTTGAAGCAGCATCATTCGATGGAAGTGAGTTAACTTCATCACAGAACAATGCAAACCAATCTATTCATGCTAAGATTCATGAAGACAACCAACATGAAGATGACGTTGAATCGAAGAAGTTGGAGGATGTAGTAAAACAAAGCAAAGAAAATGTGGAAGAAGAACAACAAATTGTTGAAAAAGCTCCTGGTTTTGGGATACCATCAATGGCAATATCAGCAACAGATACCACTCTACATAAAAGACATTCATTAGCCTTAACTCCCAATTTGTATCTCAAAAACCCTCAGGCCCCACTCTTTAGTCTTCCTCAGGCATCACATATCCCCATAGAGAACATCTTGTAA 3864 0.3406 MVSIVSDLAKSNLEKLINATLEQSRYICCFTFITREFENERKNLIPKKETLEEYVRVANRRNDNIRREVKIWQKQVEDLIEEDTKIKMTCFFGRCPNFKWQYSRGKELESKTEEIKRLMQCNFENVGIIRDVPDIEYHSSQNYISFESRKLKFEELFNALTNDNNYMIGLQGMGGTGKTTLAKEIGKKLKKSKFFDQVIDTTVSNTPDTKKIQDDIAGPLGLPLKDYTESERPRRLWDRLTNGEKILVVLDDVWGDINFEEIGIPFKDNHNGCKILVTTRNMSICHKMECEKIIQLDILPEEEGWILFQKHAGLSDTSSKSVLNKGHKISKECKGLPIAIAVIAGSLKGQTRPKEWDVALKSLQKSMLVRDDDENWSKVYACLKYSYDNIKNKTAKKLFLLCSVFQEDEEISEVLLVRLAIGAGLIEKNVDDYNYDACRNEVIAATYKLIDSCLLLNGEFGGVKMHDLVREVALSIANKEILAMNTSNKNEMTMVEKGKNIKYLLCEGKSTDVFSFKFDGSKLDILIVYLNEYGYVEVPNSFFENIAGLQVLYLSNTHIYGEATLLLPQSIQLLTNIRSLYLEGFTLGNISMLGILKDLQTLDLVRCSMDELPREISKLVKLKLLNLKLNNFEWNNPYEVIESCTSLEELYLIELLHLRQLRGVWKNLIPEIIFPDDEGATNLVEIGLFNISQLRCLIDNTDSRVQNALSKLVVLELVQMKNLKEICSGPLPFDLLKSLEKFILCYCINFEGALLKSKISFCNLQCLTIRGCPMLTSLFELSTTQSLLLLENLWIDDCEKLKSIVREENERKNLEEEIVYDHNHNKNFTSTFPNLTTLCINKCPQLIFILPIAIAQNVPRLECMDIRECTGLKYLFGSYQHKYNEEDLHHELKDVIFTTLSQVYLEDLPNFEDIFSECNELFSLNGMFLTPSYLTCFLFFFMHVTYNVKVNDSNENDLIGQTMDVSLKNIALNNTPQTPVSSKIFFTLQNVTVLVIEDYGNAEVIFCASMLECLPYLHTLVISGCNELKQIIGEDTKNQRKPFFPRLKALLLEECNKLKCVFPISTSKMLPKLEVLIIIKACMLEEVFQGNSDEKVEIPNLETAVFVELPSLCQKTEFLTVKDCWVKNCPKLSSLSSSLQSFQDIFNSIEAEEICNQNPTTECTKDLLIGTEVEAASFDGSELTSSQNNANQSIHAKIHEDNQHEDDVESKKLEDVVKQSKENVEEEQQIVEKAPGFGIPSMAISATDTTLHKRHSLALTPNLYLKNPQAPLFSLPQASHIPIENIL* 1288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0262 1287 SUPERFAMILY RNI-like 966 1139 - -
Pvu10g0262 1287 Pfam NB-ARC domain 153 389 IPR002182 GO:0043531
Pvu10g0262 1287 PRINTS Disease resistance protein signature 167 182 - -
Pvu10g0262 1287 PRINTS Disease resistance protein signature 240 254 - -
Pvu10g0262 1287 PRINTS Disease resistance protein signature 333 347 - -
Pvu10g0262 1287 PRINTS Disease resistance protein signature 856 872 - -
Pvu10g0262 1287 Gene3D - 298 391 IPR042197 -
Pvu10g0262 1287 Gene3D - 130 295 IPR027417 -
Pvu10g0262 1287 Gene3D Ribonuclease Inhibitor 897 1095 IPR032675 -
Pvu10g0262 1287 Gene3D Ribonuclease Inhibitor 731 886 IPR032675 -
Pvu10g0262 1287 Coils Coil 1210 1230 - -
Pvu10g0262 1287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 402 IPR027417 -
Pvu10g0262 1287 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 832 887 - -
Pvu10g0262 1287 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 98 813 - -
Pvu10g0262 1287 PANTHER - 832 887 - -
Pvu10g0262 1287 PANTHER - 98 813 - -
Pvu10g0262 1287 Coils Coil 48 82 - -
Pvu10g0262 1287 Gene3D Ribonuclease Inhibitor 470 697 IPR032675 -
Pvu10g0262 1287 SUPERFAMILY L domain-like 460 871 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0262 Pvu-Chr10 3728084 3733013 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0262 144 659 WRKY Transcription Factor Family AT5G45050 24.291 1.35e-13 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0262 - - pvu:PHAVU_010G025100g 2518.81