Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0261 ATGCCGTCTTATTCTTCATCATCATCATCCTTCTCAAAATCAAAATCAAAATCAAAGTCAAAATCAAAACCCCAATGGAGATACGATGTGTTCATCAGTTTCCGGGGGAAAGACACTCGGAGGAATTTCGTTTCCCATCTCTATTCTGCCCTCACAGACGCCGGAGTGAACGCTTTTCGGGACGATGAGAAGCTTGACAAGGGAGAAGAGCAGAAATCAGAACTGTTGCATGCAATAGAAGGGTCTCAAATAACCATCGTTGTTTTCTCCCAAAACTACATTCGCTCTGAATGGTGTCTTGATGAACTCCTCAAAATCATGGAATGCCATGCTTTTAGAGGACAAGTGGTTCTCACAGTATTTTATGATATTGTGCCGTCAGTTTTACGTGACAACCAACATATTTCTTTCGAAGTCGTTTCTGACCAACCGAACACGATCAAACTATGGAGGAGAGCACTCACAGAAGCAGCAAATTTATCAGGTTGGGATTTGAGAAATTACAGAAATGAAAATGATGCTATGAAGAATATTGTAGGTGAAGTTTTGAAGAGACTAGATAGAACGTACTTGCCTATCACAAACTTTCCAGTTAGACTACAATCCCAAGTGCAGAAGGGTATTGACTTGATTAGAAATAAAAAAATAGGAAGCTGTATATTAGGGATTTGGGGAATGGGAGGGATTGGCAAAACAACCATAGCCAAATCCATTTGCAATGAAATTCGTCATGAATTCAAGTATAAAAGTTATCTTGCAAATATCAGAGAAGCTTGGGGAGGAGGTCGTGGCCCAGTTGATTTGCAAGAACAGCTTCTTTCAGATATCCTTAAAACAAAAAATAAGGTGCATAGCACTGATTGGGGAAAAGGCAAGATCAAGGAAATGCTTTGCACAAAAAAAGTACTTGTTCTTCTTGATGATGTGAGTTCCGTAGAACAGTTAAATGATTTATGTGGAAATCGTGATGCAATTGGTGAAGGAAGTGTCATAATCATCACCACCAGAAACGTACGTCTACTGAGGGAGATTGGTGTTGATTGTGTGCATCGAGTGGAGAAAATGAATGAACTTGAGTCCCTTGAGCTTTTTAGTTGGCATGCTTTGAGGAGAGCCGATCCATGCAGAGACTTGTTTGAACTCTCACAAGAAGTAGTCACATACTGTGGAGGGCTACCACTAGCTCTTGAAGTTCTTGGATCTTACTTGTACAAGAGAAGAAAAGAAGAGTGGGAAAGTGTGTTATCAAAACTAAAAGAAATACCAAATGATAAGATACAAGAGAAATTAAGAATAAGCTATGATGGTTTAGAAGATGATCAGCAGAAGGGCATATTCCTTGACATATGCTGCTTCTTTATTGGTAAGGACAGAGCCTATGTCACAGAAATACTCAAAGGTTGTGGACTTTATGCTGAAATCGAATTAACAGTCCTGGTAGAAAGGAGCCTCATCAAAGTTGAAAAGAATAACAAGCTCGGAACTCATGATTTACTACGAGACATGGGAAGAGAAATTGTTCGTCAAAGTTCAGCGCTACCACAACATCGCAGTCGATTGTGTTTTCATAATCACGTACTTGATGTATTGACAGAACATACCGGAACAGAAGCCATTCAGGGATTAGCTTTGAAATTGCAAAGAACTAGCAGACTTCAATTCAGTGCCGAAGCATTTGAGAACATGAAAAGCCTAAGGCTTTTGCAATTTGATCATGTCCAACTTGCTGGAGATTATGGCCATCTTTCCAAACGCTTGGCATGGGTGTATTGGGGAGGATTTTCATCAAAATACATACCTCACAACTTCTATCAGGGAAAAGTAGTTGCTATTGACATGAAACACAGCAATCTCAAGGTAGTATGGAAGGAGCCCCAGCAACAGTTGCTGGAAAACCTAAAGTTTCTCAATCTCAGTCATTCCAAGTTCTTATCAAAGACCCCTGACTTTTCAAAACTACCAAATCTTGAGAGACTCATTCTCAAAGATTGTCCAAACTTGTCTGAGGTGCACCCTTCCATTGGAGATCTGCGTAATCTTCTTCATTTAAATTTGAAGGACTGTGCATGCCTTCAGAATCTCCCAGTGATAATCTATAAATTGAAGTCTTTAAGGGCACTCATCCTTTCTGGTTGTTCAAAGATTGACAAGTTAGAAGAAGACATAGTGCAGATGGAATCATTAACAACTCTAGTTGCAGACAATACTAGTCTAAAACAAGTGCCCTTTTCTATAGTAAGATTCAAAAGGATTGGATTTATATCTCTCTGTGGATTTGAAGGATTAGCAAGTGATTTATTTCCTTCTATCATATGGTCTTGGACTTCGCCAACAACAGGTCTTGTATCCTCTGTTCAATCATTTGGAAGCACGTCAACATCTTTAGTCTCTGTGTATATAAAGGATGACAATTTGGGTAACCTACTATCAAAGCTTAGTGAATTTTTAAAACTTCGAAGTATTTGTGTGCAATGTAACTCAGATCTTCAACTAAGTCAAGAATTAAGAAGGATGGTGGATGACTTCTGCAAAGTACATTTTGCAATGGAAACAACAAATGCACCACAAATTTCAGAAAAATCTGTGGTATCTCATTTGATTGGAATGGGAAGTTACAACCAAGTCATTGATATGCTTAGCAGTAATATCACAGAGTTAGCCTATACAGGGGAAGGATATTCAGTACCTTTCCAAGTGCCTGATGTGAGTGATAGCCCAATGAAGGGGATGATTTTGTGTGTTGTTTATTCATCAACAACCCCTGAAAACATGGCAAGTGAAAAAAGTCTAGCAATTGTATTCATCTTTAATAACACTAAGAACACCATTCAGATGTACAAGCAAACAGCAACCATGTCTTTTACTGATGAAGATTGGGTAGGTATAACATCAAATGTAGAACCTGGAGACAATGTAGAGATTTCTGTAGTTTTTGGGCAAGGAGTGACAGTTAAGAAAGCAGAAATGGCATCACCTGAAGTGAGCACACAGCCATCAGGAGAAGGGAGTGAGCAATCATCACTTGAAGTAGAAATGGAGCCATCTCTTAGTGTTCAAATGGAGCCATCTCTTGGTGTCCAAATGAAGCTACCAAAGAAGCCAAAGAAAAAAAAGTTTTCAAAAATTTCCAAGAAAATGAAAGCATGTTTATGCTTAAACTAG 3162 0.3887 MPSYSSSSSSFSKSKSKSKSKSKPQWRYDVFISFRGKDTRRNFVSHLYSALTDAGVNAFRDDEKLDKGEEQKSELLHAIEGSQITIVVFSQNYIRSEWCLDELLKIMECHAFRGQVVLTVFYDIVPSVLRDNQHISFEVVSDQPNTIKLWRRALTEAANLSGWDLRNYRNENDAMKNIVGEVLKRLDRTYLPITNFPVRLQSQVQKGIDLIRNKKIGSCILGIWGMGGIGKTTIAKSICNEIRHEFKYKSYLANIREAWGGGRGPVDLQEQLLSDILKTKNKVHSTDWGKGKIKEMLCTKKVLVLLDDVSSVEQLNDLCGNRDAIGEGSVIIITTRNVRLLREIGVDCVHRVEKMNELESLELFSWHALRRADPCRDLFELSQEVVTYCGGLPLALEVLGSYLYKRRKEEWESVLSKLKEIPNDKIQEKLRISYDGLEDDQQKGIFLDICCFFIGKDRAYVTEILKGCGLYAEIELTVLVERSLIKVEKNNKLGTHDLLRDMGREIVRQSSALPQHRSRLCFHNHVLDVLTEHTGTEAIQGLALKLQRTSRLQFSAEAFENMKSLRLLQFDHVQLAGDYGHLSKRLAWVYWGGFSSKYIPHNFYQGKVVAIDMKHSNLKVVWKEPQQQLLENLKFLNLSHSKFLSKTPDFSKLPNLERLILKDCPNLSEVHPSIGDLRNLLHLNLKDCACLQNLPVIIYKLKSLRALILSGCSKIDKLEEDIVQMESLTTLVADNTSLKQVPFSIVRFKRIGFISLCGFEGLASDLFPSIIWSWTSPTTGLVSSVQSFGSTSTSLVSVYIKDDNLGNLLSKLSEFLKLRSICVQCNSDLQLSQELRRMVDDFCKVHFAMETTNAPQISEKSVVSHLIGMGSYNQVIDMLSSNITELAYTGEGYSVPFQVPDVSDSPMKGMILCVVYSSTTPENMASEKSLAIVFIFNNTKNTIQMYKQTATMSFTDEDWVGITSNVEPGDNVEISVVFGQGVTVKKAEMASPEVSTQPSGEGSEQSSLEVEMEPSLSVQMEPSLGVQMKLPKKPKKKKFSKISKKMKACLCLN* 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0261 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 449 IPR027417 -
Pvu10g0261 1053 SUPERFAMILY L domain-like 544 827 - -
Pvu10g0261 1053 MobiDBLite consensus disorder prediction 1 15 - -
Pvu10g0261 1053 Pfam TIR domain 28 187 IPR000157 GO:0007165
Pvu10g0261 1053 MobiDBLite consensus disorder prediction 1 24 - -
Pvu10g0261 1053 Gene3D Ribonuclease Inhibitor 504 851 IPR032675 -
Pvu10g0261 1053 Gene3D - 192 349 IPR027417 -
Pvu10g0261 1053 SUPERFAMILY Toll/Interleukin receptor TIR domain 19 163 IPR035897 -
Pvu10g0261 1053 SMART till_3 27 160 IPR000157 GO:0007165
Pvu10g0261 1053 MobiDBLite consensus disorder prediction 990 1013 - -
Pvu10g0261 1053 PRINTS Disease resistance protein signature 220 235 - -
Pvu10g0261 1053 PRINTS Disease resistance protein signature 296 310 - -
Pvu10g0261 1053 PRINTS Disease resistance protein signature 389 403 - -
Pvu10g0261 1053 PRINTS Disease resistance protein signature 699 715 - -
Pvu10g0261 1053 Pfam NB-ARC domain 210 424 IPR002182 GO:0043531
Pvu10g0261 1053 Gene3D - 354 438 IPR042197 -
Pvu10g0261 1053 ProSiteProfiles TIR domain profile. 26 186 IPR000157 GO:0007165
Pvu10g0261 1053 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 30 993 - -
Pvu10g0261 1053 SUPERFAMILY "Winged helix" DNA-binding domain 424 513 IPR036390 -
Pvu10g0261 1053 MobiDBLite consensus disorder prediction 988 1016 - -
Pvu10g0261 1053 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 993 IPR044974 GO:0006952
Pvu10g0261 1053 Gene3D - 22 191 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0261 Pvu-Chr10 3709306 3716148 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0261 28 745 WRKY Transcription Factor Family AT4G12020 29.650 1.59e-69 253