Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0251 ATGGGGAGAAGAATGATTCAGGAAAGACTTTCTGGGAAAAGGGTGCTCATTGTACTTGACGATGTGACTGAGTTTGATGCATCAGTAGTATCGGAATGCCTTGAATGGTTCAGTGGAGGAACTGTAATAATCATTACAACAAGAGATGTAGACCTACCAAGGATTCTTCAAGTTGATTTTGTTTTTCCGTTAAAGCCAATGAACGCAAACGAGTCCCTTGAGCTTCTTAGTTGGCATGCATTTGGAGAAGCAAAACCAAAAGAAGAATACAATTACCTTGCAAAAAGTGTAGTTAGTCGTTGTGGAGGACTACCTCTAGCTCTTGAAGTCATTGGAAGTTGTTTATTTGAAAGGACAAAAGAAGAATGGAATAGTGTTCTGTTAAAATTGGAGAAAATTCCCCTGCACGACATTCAACGGAAATTGAAAATAAGCTTCGATGGTTTACTCAATGAAAAGGAAAAAGATTTATTCCTTGATATATGTTGTTCCTTCGTTGGTAAGGGCAGATCCTATGTTACCAAGATCCTAAATGGCTGTGGAGTAGATGCTGATACTGGAATAAGAGTTCTCATAGAACGTAGCTTCATACAAATTAAAAAGAACAAACTTGCAATGCATCCTTTGCTACAAGAAATGGGAGAAGAAATTATCCGTGAAAAATCAAAAAAGGAATTTTGGATGGAGAGGAGGAGACTGCAGTTTGATGATGCAGAATATGTATTGACAGATAATTCAGGGAGAAACTCTCGGGCAATGCCTGAGAAACTGCGTTCAGCCAGAAGAGAACAATCAAGACTCCTGCTGAAACTCGCTGGAAGTTCTGAGTACACTTCTAGGAAATTGAGATGGATCAATTTGCAAGGGTCTTTTTCAGAATGCGTACTTGACGGCTTTCATCTGCATGATGCAATAGCGATTCACTTAAAACACACTCATCTTCGACACCTCTTGAAAGAACCTCAGGTTTTGAGGTGGCTCAAAGTCCTTAATCTTAGTCACTCCAAGTGTTTAATAGAAACCCCTGACTTTTCCGGATTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGTCCAAGATTGCACAAAGTACACCAATCTATTGGATGTCTCTCCAATCTTACACTGCTAAATTTGAAGGACTGCACAAGTCTAAGAAATCTCCCCAGAAATTTATATACGTTAAAATCCTTAAAAACTCTCATTCTCTCTGGTTGTTCGATGATTCATCCATTGGAAATAGATACGGTGCAAATGGAATCCTTGATAACTCTAATTACAGAAAATACAGTTGTTAAACAAGTGCCTTTTTCAGTTGTAAGCTCAAAAAGCATTGGATATATATCCCTAAGTGGATTTGAGAGATTGCCACGTAATCTTTTTCCTTCTATCATTCGGTCTTGGATGTGCCCTACAAAGAATTCCACATCTTATATTAATTCGTTTTGCATGGATATGGAGGATGATAGTTGGGATGATATTACACCCTTGCTTAGCAGCCTTGTAAATCTTCGAAGTGTTTTGGTGCAATGTGACACCGAGTTTCAACTGTCTAAGCAATTGAAAAATATTCCGGTGGAATATTTTGCAACTACTACAGAATCGGGAATTTCAAAGCAGCACTTCAGGTCTTCTTTGATTGGTGTTGGAGCATATCATGAATTCTTCAATGCTGTCAGCCATAACGTATCTAAGGTAACAGTAAGCAGTGAGTCATGTGATGTTTGTCTCCCAGTTGACAATGATCCTTATTGGTTGGGCCATATGGGTGAGGAACATTCTGTTTCTTTCACTGTGCCTCTAGATCGTGACTTGAAGGGAATGGTTTTGTGTGTTGTTTATTCATCAACCCCTGAAATAGACGCAACTGAATGTCTTAGAAGTGTCTTAATTGTTAACTACACAAAGTGCACATTGCATATACACAACCATGGCACAGTAATTTCCTTTAATTATATAGATTGGCAGGGTATATTGTCAAATTTAGAATCTGGAGACAAGGTGGAGATTTTTTTGAGTTTTGGTCGTGGATTGGTTGTCAAGAACACAGTTGTCTATCCCATATGTGGTGAATCAAATTACTTGAGAAAAGAGCCAAAGAAAAATTCTCTCCTTAGATTCATAAAGAAAATTGTAAGGTGA 2142 0.3824 MGRRMIQERLSGKRVLIVLDDVTEFDASVVSECLEWFSGGTVIIITTRDVDLPRILQVDFVFPLKPMNANESLELLSWHAFGEAKPKEEYNYLAKSVVSRCGGLPLALEVIGSCLFERTKEEWNSVLLKLEKIPLHDIQRKLKISFDGLLNEKEKDLFLDICCSFVGKGRSYVTKILNGCGVDADTGIRVLIERSFIQIKKNKLAMHPLLQEMGEEIIREKSKKEFWMERRRLQFDDAEYVLTDNSGRNSRAMPEKLRSARREQSRLLLKLAGSSEYTSRKLRWINLQGSFSECVLDGFHLHDAIAIHLKHTHLRHLLKEPQVLRWLKVLNLSHSKCLIETPDFSGLPSLEQLILKDCPRLHKVHQSIGCLSNLTLLNLKDCTSLRNLPRNLYTLKSLKTLILSGCSMIHPLEIDTVQMESLITLITENTVVKQVPFSVVSSKSIGYISLSGFERLPRNLFPSIIRSWMCPTKNSTSYINSFCMDMEDDSWDDITPLLSSLVNLRSVLVQCDTEFQLSKQLKNIPVEYFATTTESGISKQHFRSSLIGVGAYHEFFNAVSHNVSKVTVSSESCDVCLPVDNDPYWLGHMGEEHSVSFTVPLDRDLKGMVLCVVYSSTPEIDATECLRSVLIVNYTKCTLHIHNHGTVISFNYIDWQGILSNLESGDKVEIFLSFGRGLVVKNTVVYPICGESNYLRKEPKKNSLLRFIKKIVR* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0251 713 PRINTS Disease resistance protein signature 9 23 - -
Pvu10g0251 713 PRINTS Disease resistance protein signature 101 115 - -
Pvu10g0251 713 PRINTS Disease resistance protein signature 393 409 - -
Pvu10g0251 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 161 IPR027417 -
Pvu10g0251 713 Gene3D - 1 60 IPR027417 -
Pvu10g0251 713 SUPERFAMILY "Winged helix" DNA-binding domain 137 230 IPR036390 -
Pvu10g0251 713 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 688 - -
Pvu10g0251 713 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 688 IPR044974 GO:0006952
Pvu10g0251 713 Pfam NB-ARC domain 4 138 IPR002182 GO:0043531
Pvu10g0251 713 Gene3D Ribonuclease Inhibitor 268 417 IPR032675 -
Pvu10g0251 713 Gene3D - 67 149 IPR042197 -
Pvu10g0251 713 SUPERFAMILY L domain-like 272 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0251 Pvu-Chr10 3531133 3533564 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0251 338 457 WRKY Transcription Factor Family AT5G45050 35.484 4.36e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0251 - - pvu:PHAVU_010G024000g 1419.45