Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0242 ATGGAGAGCATTGTATCTGATTTGGCAAAGTCAAATTTGGAGAAATTGATTAATGCCATACTAGAACAATCACGTTATATTTGTTGCTTCACATGCATTACTGGGGACTTTGAAAAGGAAAGGAAAAATTTGATAGCAAAAAAGAAAACATTGGAAGAGTGTGTTAGAGTGGCAAAGAGAAGAAATGATAACATAGCAAGAGATGTCACACTTTGGCAAAACCAAGCTGAAGACCTTATTGAAGAAGACACAAAAACGAAAGTGACATGTTTTTTTGGGAGGTTTCCTAACTGCAAATGGCAATATAGTAGGGGGAAGGATTTGGAAAGCAAGACAGAGGAGATTAAAAGACTCATGGAACGCAACTTTGAAAATTTTGGAATCACTCGTGATGTTCCAGACATTGAATATCATTCTTCTCAAAATTACATTTCTTTCAAAAGTAGAAAGTTGAAATTTGAAGAACTTTTTAATGCATTGACAGATGTGAACAACTATATGATTGGATTGCAAGGGATGGGGGGAACAGGTAAAACAACATTAGCAAAAGAGATGGGTAAGGAGCTTAAGAAATCAAAATATTTTGATCAAGTCATTGATACTACAGTATCTAATACCCCTGATACAAAAAAAATTCAAGATGATATTGCAGGACCACTTGGGTTGCCATTGAACAATTGTACTGAATCAGAAAGGCCTAGAAAGTTGTGGGATAGATTGACCAATGGTGAGAAAATTCTTGTAATTCTAGATGATGTGTGGGGAGATATCAGTTTTGAAAAAATAGGTATTCCATTGAAGGGCGACCACAATGGTTGCAAAATTCTTGGAACAACCCGCGATATGAACATATGCCATAAAATGGATTGTGATAAGAAAATTCAACTGGATATCTTTCCGGAGGAAGAGGGATGGATATTGTTCCAAAAGCATGCTGGTTTAAGTAATACTTCCTCTAAAAGGATTCTTAATAAAGGTCGAAAAATTTCCAAAGAATGTAAAGGATTGCCAATTGCAATTGCAGTTATTGCTGCTAGTTTAAAGGGAAAACAACGTCCAGAAGAATGGGATGTAGCCTTACAATCCTTGCAAAAGTCCATGCTCGAACGAGGTGATGATGAAAACTGGAGTCAAATTTACACATGTCTGAAGTATAGTTATGACAATATGAAGAATGAAACAGACAAGAAATTGTTCCTTTTATGTTCTGTGTTTCGAGAAGATGAAGATATATCTGAAGAACTTTTTGTCAGGCTTGCCATAGGAACGGGTCTCATTGAGAACATTGATGAAATTTCCAATTATGGTGAATGTCGTAATAAAGCTGTTGTAGCAAAATATAAACTCATAGATTCATGTTTGTTATTGCATGGAGAATTTGGAAGTGTAAAAATGCATGACTTGGTTCGTGAAGTGGCTTTATCTATAGCTAATAAGGAGATTTTGGCAGTGGATACAACTAACAATAAAGAAATGACAATGGTTGAAAAGGGAAGGAGTATTAAATATTTTTTGTTTGAAGGGAAAAGCACAGATCTTTTTTCCTTCAATTTTGATGGATCTAAACTTGATCTTCTTATTGCCTACTTAACTGCAACGGAAAATTTTGATGTGAAAGTCCCAAATTCATTCTTTGAAAATATAGCAGGACTTCGAGTTTTGTATTTATCAAACAAGTATTCAAATATAACTTTATCATTACCAAAGTCAATTCAATCATTGACAAATATCCGATCTTTATACCTTGAAGGATTCATCTTAGGTGACATCTCTATTCTTAGAATCCTAAAGGACCTTCAAACTCTCGAATTGGTTTCTTGTTCAATGGATAAATTTCCTAGAGAGATTTCAAAATTGGTAATACTTAAATTATTGAATTTGAAGTATAGTACATGTGAAAGGAAAAATTCATTTAAAGTGATTGAAAGTTTCACTTCATTGGAAGAATTGCATTTCATTGACGAAGAAGTTTCAAATATATGGCATAATGTACATCTTTCTAACTATCAAAGGTTTCATATATTGGACATGCATTCTGGATCTTTCATGTCCAATGAATTCTTTCTAAGGAATTCCCTGGATATTCACATGGCTGATAAAGTTTTTTGTGAAGAGACATTCAAAAATCTATTGCAAAAAGTTGAATGTCTTAGTTTAAGGAGCCTTCAAGGAATGTGGAAAAATCTCATACCTGAGATTATTTATATTGATGATGATGGTGAATCTAATCTATTTGAGATTATTTTCCAAAATATTCCACAACTCAAATGCCTAATCGACAATACTAATTATCGTGTACAAAATGTCTTATCCAACTTGGTTGCACTTACACTTTATGAAATGGAAAATTTGAAAGAAATATGTTGTGGATCCCTTCCCTTTGAACTTTTGAAGAGTTTAAAATCTCTCATTCTCTATGGTTGCATACATTTAGAAGGCATGGTATTTAAGAGCAATATATCTCTCTGCAATCTTATACAATTGTATATATTGAAATGTCCAATGTTAACATCTCTATTTGAGTTATCAACCACACAAAGCCTAATATTGTTGGAGATGTTGGTGATAGAGGATTGCGAACAACTGAAAAGTATAGTAAAAGATGGAAACAGAAGGAAAGAAGATTCAGGAGAAGAAATAGTTGATGCTCATAATCATAGCAAGAGTTTTACTTCAACCTTTCCATATTTAAAGACTCTTACTATCTCCAACTGTCCCCAATTACTCTTTATACTTCCAGTGGTTGTTGCTCGAAATGTTCCAAAACTTAAACATATGGATATAAGAGAGTGTAATCTGTTAAAATACGTATTTGGCCCATACCAGCATAAGCATGAAGAGGAAGATTTACATCATGAGTCAAAGGATGTCATACTCACTACTCTAAGTCAACTCTATCTAGAAAACTTGCCTAATTTTGTGAACATTTTTCCGGAATGTGATGAGTTGCACATGTCATCTTCTAGATATGAGTCAAAGGCACAAGTAGAATCAAACCCTATGAAATGTAAGATTTTACATTGGATCCATAAATATAGAAACAAATGGAGAACTGCCAAAATTCCTTCAGATTCCAAGGATCAATTACAAGATTGTTCTCTCTCAATGGTAAATGACTCCAGTGCAAATGATGTGATTGGACATCAAATGACTGTACATTGGAAAAACATTGCATTGAATTATATGCCTCAGACACATGTGGATTCCAAGATTTTTTTTACTCTACAAAATGTTACAGTGTTAGTAATTGAAGAATGTAAAAAAATTGAAGTAATATTTTGTGCTTCTATGCTGGAATGCTTACCATATATGCATACACTTGCCATATTTAGATGCAATGAATTAAAACAGATAATTGGTGAGGATACAAAGAATCAGACAAAGTCATTTTTTCCAAGGTTGAAAGCTCTTGTGATAGTAGGATGCAACAAGTTGAAATGTGTCTTTCCCATTTCAACTTCCAAAATGTTATCCGAGTTAGAAGTTCTGGTAATCATAAAAGCATGTATGCTAGAAGAATTATTCCAAGGAGATAGTGATCTAAGAGCTGAGATTCCAAATATGAAAATTCTAGTATTTGTTGAACTTCCAAGACTTTGCCAGGAGATTGAGTTTTTTACTGTAAAAGATTGTTGGGTGAAGAATTGTCCAAAACTTTCCTTGTCTTCATCCCTTGAAAGTTTAGAAGATATTATTAATTCTATAGAAGACCCGCCAAGCAAAACAGCAGTCAAAAAACAAGTGACGCTTCGTCGCACCACCGCAAAGCACTCACCTGCAACGCTGTTGCACCTCGTGAGAGAGGCACTACGCCATTGCCTTTTTCGACAGAGCCACCGCATTGCTACAGCTCGCAACAGAACCACCACGCCGCTGCTTCCCGTGATCGCGCCACTCCGCTTCTCCCTGTTACCCGTTCTGCTTCTCGTTGTGATCGCACCGTGTCGCCAGCGACCCTTTCCTCCCTTGTGCCGCCAACGAACGCGCTCTTTTCTGCTGCCAATGATCGCATCGCGCGCCAGCACCATTATTGGTTTGTTCGCCCTCCGCGCGCAGCGTTGCCAGCAACCGCGACCAACCGCGCTAGCTACCGTGTCGTTAATATTTTTTTATACCGATGGTTCTGAAATCGTCGTTATAAACAACTTATTTATAACGACACCCGAAATAATTGCAATTCCTTAA 4185 0.3577 MESIVSDLAKSNLEKLINAILEQSRYICCFTCITGDFEKERKNLIAKKKTLEECVRVAKRRNDNIARDVTLWQNQAEDLIEEDTKTKVTCFFGRFPNCKWQYSRGKDLESKTEEIKRLMERNFENFGITRDVPDIEYHSSQNYISFKSRKLKFEELFNALTDVNNYMIGLQGMGGTGKTTLAKEMGKELKKSKYFDQVIDTTVSNTPDTKKIQDDIAGPLGLPLNNCTESERPRKLWDRLTNGEKILVILDDVWGDISFEKIGIPLKGDHNGCKILGTTRDMNICHKMDCDKKIQLDIFPEEEGWILFQKHAGLSNTSSKRILNKGRKISKECKGLPIAIAVIAASLKGKQRPEEWDVALQSLQKSMLERGDDENWSQIYTCLKYSYDNMKNETDKKLFLLCSVFREDEDISEELFVRLAIGTGLIENIDEISNYGECRNKAVVAKYKLIDSCLLLHGEFGSVKMHDLVREVALSIANKEILAVDTTNNKEMTMVEKGRSIKYFLFEGKSTDLFSFNFDGSKLDLLIAYLTATENFDVKVPNSFFENIAGLRVLYLSNKYSNITLSLPKSIQSLTNIRSLYLEGFILGDISILRILKDLQTLELVSCSMDKFPREISKLVILKLLNLKYSTCERKNSFKVIESFTSLEELHFIDEEVSNIWHNVHLSNYQRFHILDMHSGSFMSNEFFLRNSLDIHMADKVFCEETFKNLLQKVECLSLRSLQGMWKNLIPEIIYIDDDGESNLFEIIFQNIPQLKCLIDNTNYRVQNVLSNLVALTLYEMENLKEICCGSLPFELLKSLKSLILYGCIHLEGMVFKSNISLCNLIQLYILKCPMLTSLFELSTTQSLILLEMLVIEDCEQLKSIVKDGNRRKEDSGEEIVDAHNHSKSFTSTFPYLKTLTISNCPQLLFILPVVVARNVPKLKHMDIRECNLLKYVFGPYQHKHEEEDLHHESKDVILTTLSQLYLENLPNFVNIFPECDELHMSSSRYESKAQVESNPMKCKILHWIHKYRNKWRTAKIPSDSKDQLQDCSLSMVNDSSANDVIGHQMTVHWKNIALNYMPQTHVDSKIFFTLQNVTVLVIEECKKIEVIFCASMLECLPYMHTLAIFRCNELKQIIGEDTKNQTKSFFPRLKALVIVGCNKLKCVFPISTSKMLSELEVLVIIKACMLEELFQGDSDLRAEIPNMKILVFVELPRLCQEIEFFTVKDCWVKNCPKLSLSSSLESLEDIINSIEDPPSKTAVKKQVTLRRTTAKHSPATLLHLVREALRHCLFRQSHRIATARNRTTTPLLPVIAPLRFSLLPVLLLVVIAPCRQRPFPPLCRQRTRSFLLPMIASRASTIIGLFALRAQRCQQPRPTALATVSLIFFYTDGSEIVVINNLFITTPEIIAIP* 1395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0242 1394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 402 IPR027417 -
Pvu10g0242 1394 PANTHER - 897 980 - -
Pvu10g0242 1394 PANTHER - 73 874 - -
Pvu10g0242 1394 Gene3D - 299 391 IPR042197 -
Pvu10g0242 1394 Pfam NB-ARC domain 154 389 IPR002182 GO:0043531
Pvu10g0242 1394 Coils Coil 62 82 - -
Pvu10g0242 1394 SUPERFAMILY L domain-like 892 1219 - -
Pvu10g0242 1394 Gene3D Ribonuclease Inhibitor 876 1242 IPR032675 -
Pvu10g0242 1394 Gene3D Ribonuclease Inhibitor 521 870 IPR032675 -
Pvu10g0242 1394 SUPERFAMILY L domain-like 458 936 - -
Pvu10g0242 1394 Gene3D - 128 295 IPR027417 -
Pvu10g0242 1394 PRINTS Disease resistance protein signature 167 182 - -
Pvu10g0242 1394 PRINTS Disease resistance protein signature 240 254 - -
Pvu10g0242 1394 PRINTS Disease resistance protein signature 333 347 - -
Pvu10g0242 1394 PRINTS Disease resistance protein signature 918 934 - -
Pvu10g0242 1394 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 73 874 - -
Pvu10g0242 1394 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 897 980 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0242 Pvu-Chr10 3431788 3444404 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0242 144 587 WRKY Transcription Factor Family AT5G45050 26.078 7.34e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0242 - - var:108346730 1630.92