Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0232 ATGGATTTCCTTTCACAACCAACAACACTAGTAGTGATAGCCATAACCACAATTCTTATCTACAACACATGGAGGAAGAAAAAGGGTAGTCAGAAAAGCAAGGGTGCAGAACCCCCAGAACCCTCAGGTGCCCTACCTCTGATAGGTCACCTCCACCTATTAGGGGCTCAAACACCCCTTGCTAGGACCTTTGCTGCTTTGGCTGACAAATATGGCCCCATGTTTCAAATCCGTCTAGGGGCATACCCTGCCCTTGTGATCTGCAACCAAGAGGCTATAAAAGAGTGCTTCACCACCAATGACAAAGTCTTGGCCTCACGCCCTAAGTCAAGCCATGGTGTGCATCTTGGTTACAACTTTGCAGGGTTTGGATTTGCCCCTTATGGCACATACTGGACCAAGATCAGAAAGCTCACCATGCTCGAATTGCTCTCTGCTCGCCGCCTACAATTCCTGAGCCATGTTTATGAGTCTGAGATTGATACTTTGGTGAAGGACCTTTGGTTGTATCTTGGAGGCAAAACTCATGTTAAAGTCACAATAAGTGAGTGGTTGGAACGCTTCACCTTCAATATCATCATAAAGATGATCGCTGGGAAAAGGTATTTCAGTTATTTGGAAGATGTGGATGATGCAGAAGCACATGGTGTTGTGAAACTTATAAAGGAGTTCATGCATATATCTGGGGAGTTTGTTCCCTCAGATTTGATTCCAGTTCTTGGATGGTTTGGTGTGCATGGGAAAGTGCTGAAATCTATGAAACGAATTGCAAAAGATTTGGACAGCCTTGTGGGAGGTTGGGTTGAAGAACATAAGAACAGTGATCCTCTCAGAAACAAGTCATTGGAGAAACATGATTTCATTGATGTCATGCTCTCTGTTATTCAAGATGATCCTCTCTCTGGTCATGATCGTGATACTATCATCAAAGCTAATGTTACGAATCTTGTGTTAGCGGGGTCAGACACAACATCGACGACAATGACATGGATACTTGCGATGCTGATGAAGAATCCAGAGGCTTTGAAGCGAGCACAGGAAGAGATTGAAGATGAAGTGGGTAGGGAGAGAAAGGTAGAAGCATGTGACCTAAAAAATCTCATTTATTTGCAAGCAGTTGTGAAGGAAACTTTGAGGTTGTACCCTCCAGGGCCTCTGCTGGTGCCCCACGAGGCTAGAGAAGATTGCTGCATTCAGGGGTATCGTGTACCTAAAGGGACACGTGTGTTTGCGAACGTGTGGAAGCTTCACAGAGATCCTAGGGTTTGGTCGGAGGCTGAGAAGTTTTCACCAGAAAGGTTTTTGAATGAGAATGGAGAAGTTGATGAAGGTCAGCGTTTTGAGTATTTGCCATTTGGGTCAGGGAGAAGAGCTTGCCCTGGTTCCACTTTTGCCACACAACTCACTCTCATCACACTTGCTCGTTTGCTTCAGGCCTTTCATTTGGATGAGCCTTTGGATGAACCTGTTGATTTAGAAGAAGGGTTGGGCATCACCTTGCCCAAGATCAACCCATTACAAATTCTCTTCACCTCAAGGTTACCTAATCAATTCTATAGCTCGGACAAATCGTATCATTGA 1581 0.4485 MDFLSQPTTLVVIAITTILIYNTWRKKKGSQKSKGAEPPEPSGALPLIGHLHLLGAQTPLARTFAALADKYGPMFQIRLGAYPALVICNQEAIKECFTTNDKVLASRPKSSHGVHLGYNFAGFGFAPYGTYWTKIRKLTMLELLSARRLQFLSHVYESEIDTLVKDLWLYLGGKTHVKVTISEWLERFTFNIIIKMIAGKRYFSYLEDVDDAEAHGVVKLIKEFMHISGEFVPSDLIPVLGWFGVHGKVLKSMKRIAKDLDSLVGGWVEEHKNSDPLRNKSLEKHDFIDVMLSVIQDDPLSGHDRDTIIKANVTNLVLAGSDTTSTTMTWILAMLMKNPEALKRAQEEIEDEVGRERKVEACDLKNLIYLQAVVKETLRLYPPGPLLVPHEAREDCCIQGYRVPKGTRVFANVWKLHRDPRVWSEAEKFSPERFLNENGEVDEGQRFEYLPFGSGRRACPGSTFATQLTLITLARLLQAFHLDEPLDEPVDLEEGLGITLPKINPLQILFTSRLPNQFYSSDKSYH* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0232 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Pvu10g0232 526 Pfam Cytochrome P450 38 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0232 526 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0232 526 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0232 526 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0232 526 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0232 526 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0232 526 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0232 526 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0232 526 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0232 526 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0232 526 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0232 526 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0232 526 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0232 526 SUPERFAMILY Cytochrome P450 38 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu10g0232 526 PANTHER CYTOCHROME P450 FAMILY PROTEIN 14 519 - -
Pvu10g0232 526 PANTHER CYTOCHROME P450 82C3-RELATED 14 519 - -
Pvu10g0232 526 Gene3D Cytochrome P450 27 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0232 Pvu-Chr10 3296414 3299814 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0232 39 519 Cytochrome P450 AT4G31940 47.561 2.61e-162 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0232 - - gmx:100790675 859.366