Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0211 ATGTTTGTTCCAACAGTGAACCAAAACTTGCTTGAAGACCTTGAAGTAATGGGATTTCCAAAGGCAAGGGCAACCAGAGCACTTCATTATTCTGGCAATACCAGCTTAGAGGATGCTATAAATTGGATCGTTGATCATGAGAATGACATTGATATTGATGAGATGCCATTGGTAGATGTAGACATTGAGGTAGAGTCCACTGAATCCTTCCCCATCTCAGAAGAAATTAGAATCAAAGCACAGAGTTTAAGGGAACAAGAACGTAAGAGGAAAGAGCAGGAAGAGAAAAGATTGGAGAGAGAAAGGGAGAAGGAGAGGATTCAAGCAGGTAAGAGACTCCTTGAAGCCAAGCGAATTGCTGAAGAAAATGAAAGAAAACGGGATTTATCCCTGAGAAAAGCAGAAAAAGAAGAAGAGAAAAGAGCTAGAGAGAGAGTTCTACAGAAACTAGAGCAGGATAAGTTAAATAGAAGATTTAAGCAAGGATTGCCTTTAGAAGGCCAAGCAACTGTCAGATCTTCTGCTACTAAAATACAACAGGAAAAGAAGTTAAATCTTGTTTATACAACTACAAAATCTGAGCAGTTAAGAGAATGTCTGAGGAATCTGAAGCGTAACCATCAGGGTGAGGATGCCAGAGTCAGAAGAGCCTTTCAAACACTGCTAGTCTATATTGGAACTGTTGCCAAGAATCCCAAGGAGGAAAAGTACAGGAAGATACGACTGCAAAACCCATTATTCCTGGATAGAGTTGGAAGTTTAAATGGAGGTGTAGAGTTTCTTGAGCTATGTGGTTTTGAGAGAACTGGTGACTTCTTGCTTCTTCCTCAAGAAAAGATTGACATGGCACTGCTGAATTCAGCTGGTTTTGTCTTAAATTCTGCAATGACAAACCCTTTCTTTGGAGTTTTAAGTAAAGCTCACAATTAA 930 0.3968 MFVPTVNQNLLEDLEVMGFPKARATRALHYSGNTSLEDAINWIVDHENDIDIDEMPLVDVDIEVESTESFPISEEIRIKAQSLREQERKRKEQEEKRLEREREKERIQAGKRLLEAKRIAEENERKRDLSLRKAEKEEEKRARERVLQKLEQDKLNRRFKQGLPLEGQATVRSSATKIQQEKKLNLVYTTTKSEQLRECLRNLKRNHQGEDARVRRAFQTLLVYIGTVAKNPKEEKYRKIRLQNPLFLDRVGSLNGGVEFLELCGFERTGDFLLLPQEKIDMALLNSAGFVLNSAMTNPFFGVLSKAHN* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0211 309 Coils Coil 76 108 - -
Pvu10g0211 309 CDD UBA_PUB_plant 5 53 - -
Pvu10g0211 309 MobiDBLite consensus disorder prediction 83 104 - -
Pvu10g0211 309 SUPERFAMILY UBA-like 4 57 IPR009060 GO:0005515
Pvu10g0211 309 PANTHER PUB DOMAIN-CONTAINING PROTEIN-RELATED 1 305 - -
Pvu10g0211 309 Coils Coil 119 156 - -
Pvu10g0211 309 Pfam UBA/TS-N domain 11 43 IPR015940 -
Pvu10g0211 309 Gene3D - 191 294 - -
Pvu10g0211 309 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
Pvu10g0211 309 PANTHER F13M7.16 PROTEIN 1 305 - -
Pvu10g0211 309 Gene3D - 8 53 - -
Pvu10g0211 309 SUPERFAMILY PUG domain-like 187 300 IPR036339 -
Pvu10g0211 309 Pfam PUB domain 213 281 IPR018997 -
Pvu10g0211 309 SMART PGNneu 216 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0211 Pvu-Chr10 3085709 3094450 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0211 1 304 C2H2 Transcription Factor Family AT1G04850 62.987 3.20e-106 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0211 K24348 - gmx:100781260 493.812