Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0197 ATGGGTTTTCCAACCAGAATCAATCACTTTTTGAGTTTTTTGCTCATATTTTGCAGCTTCTGTTGGGGTGTAAGTTCTGTGAATGATAGCATCACATCAACCAGATTCATCAGGGACTCTCAGACTATTAGCTCAAGCAACGGTGACTTCAAGCTTGGATTCTTCAGCCCTCAAAACTCTACACATCGCTATGTGGGAATCTGGTATCTCTCTCAAACCTACATCATATGGACAGCAAATAGAGATCAACCACTGATCAATGATTCATCTGGGGTGCTCAAAATTCACAAGGATGGGAATCTTGTGGTGTTGAATGGAGAAAACAGAGTGATGTGGTCAACAAATATGTCAGCTAGTGCTACCAACACAACTGCTCAACTTGACAATTCAGGAAATCTGATCCTTCGTGATGTCTCAAGCTTAACAACATTATGGGACACTTTCACACACCCTGCTGATATTGCTGTGCCATCGATGAAAATTGCGAGTAATAGGATCACTGGTGAGAAGATTGAGTATGTGTCATGGAAAAGCAGTTCTGACCCTTCTTCCGGGTACTTCACTGGGAGCCTTGAAAGGTTGGATGCTCCAGAAGTGTTTTTTTGGTACAACAAAACAAAGCCATATTGGAGAACTGGTCCATGGAATGGAAGAGTCTTCCTTGGATCGCCAAGGATGTTAACTGAGTACTTATATGGGTGGCGTTTTGAGCCAAATGATAATGGAACTGCTTATCTGACCTACAACTTTGAGAAACCAGCCATGTTTGGAATCCTTACCATAACTCCACGAGGCACACTAAAACTGGTGGAGTTTCTGAACAGAACGATCTTTCTGGACTTTGAGGTGGATCAGAATGAATGTGACTTTTATGGGAAGTGTGGGCCATTTGGAAGCTGTGATAACTCCACAGTACCAATTTGCAGCTGTTTTGAGGGGTTTGAGCCAAGGAAGCCAGAGGAATGGAACAGCAAAAATTGGACAAATGGGTGTGTGAGGAATGTGGCACTGAATTGTGGCAAGTTGAGAAATGTGAGTGAAAAAGTTGAAGAAGATGGTTTTTTGGAGTACCATAACATGAAGGTGCCTGACTTTTCAGAGAGATCAGATGGAGACCAAGAGAAATGTGGAGCAGATTGCTTGGCAAATTGCTCTTGCTTGGCATATGCATATGATTCTTATATTGGTTGCATGTACTGGAGCAGAGACTTGATTGATTTGCAGAAATTTCCTAATGGAGGGGTTGATCTCTTCATTCGTGTCCCATCACAGCTTCTACCTAGTGGTGGTGGGAAGGGAAGAAAGTACAAGGTATTAATCATTGGCATTATGGGGGCAATTGGAGCATTAGCAACTGCAATCAGTGCTTATCTTCTGTGGAGGAAATTTACTCCTAAGCATAAAGGAAGTGTGCTTCAAGATGAGATTAGCGGAAAGAAAAAGGAAATTACTACTAAATTGGAAGAGCTGCCACTCTTTAAATTTGAAAAGCTTGCAAATGCTACAGACAATTTTCACTTTGGTAACATGCTTGGAAAGGGAGGTTTTGGTCCTGTATATAAGGGACACTTGGAAAATGGACAAGAAATTGCTGTAAAAAGACTTTCAAAAACTTCTGGACAAGGATTAGAAGAATTCATGAATGAAGTGGTAGTGATTTCTAAACTTCAACATCGAAATCTAGTAAGACTTCTTGGATGTTGCATTGAAGGGGAGGAACAAATGTTGGTATATGAGTTTATGCCAAATAAAAGTTTGGACTCATTTCTCTTTGATCCACTTCAAAGGAAAGTTTTAGATTGGAAGAAGCGCTTTAACATAATTGAAGGAATAGCACGAGGAATACTTTATCTTCATCGAGATTCAAGACTAAGAATTATACATAGAGATCTTAAAGCAAGCAATATCTTATTGGATGATGATATGAATCCAAAGATATCTGACTTTGGTTTAGCTAGAATTGTTAGAGGAGGTAATGATGATGAAGCTAACACAAAAAGGGTTGTCGGAACTTATGGTTATATGCCTCCTGAATATGCAATGGAAGGAATTTTTTCAGAAAAATCAGATGTGTATAGCTTTGGAGTATTATTACTAGAGATTGTAAGTGGACGAAGAAATACTAGCTTTCATAATGATGAACAATCACTCAGTCTCGTTGGATTTGCATGGAGATTATGGAATGAAGGCAACATTATAACTATAATAGATCAAGAGATATGGGATCCAGTGTTTGAAAAAAGTATGTTGAAGTGCATACATATAGGACTTTTATGTGTTCAAGAACTTACTAAAGAAAGACCATCCATATCAACTGTGGTTTTGATGCTTATAAGTGAGATTACACATCTTCCTCCTCCAAAGCAAGTTGCATTTGTTCAAAAACAAAATTGTCAGAGTTCAGAGTCTTCTCAAAAAAGTCAATTTAACTCAAACAACAATGTGACTCTAAGTGAAGTCCAAGGTAGATAA 2472 0.3896 MGFPTRINHFLSFLLIFCSFCWGVSSVNDSITSTRFIRDSQTISSSNGDFKLGFFSPQNSTHRYVGIWYLSQTYIIWTANRDQPLINDSSGVLKIHKDGNLVVLNGENRVMWSTNMSASATNTTAQLDNSGNLILRDVSSLTTLWDTFTHPADIAVPSMKIASNRITGEKIEYVSWKSSSDPSSGYFTGSLERLDAPEVFFWYNKTKPYWRTGPWNGRVFLGSPRMLTEYLYGWRFEPNDNGTAYLTYNFEKPAMFGILTITPRGTLKLVEFLNRTIFLDFEVDQNECDFYGKCGPFGSCDNSTVPICSCFEGFEPRKPEEWNSKNWTNGCVRNVALNCGKLRNVSEKVEEDGFLEYHNMKVPDFSERSDGDQEKCGADCLANCSCLAYAYDSYIGCMYWSRDLIDLQKFPNGGVDLFIRVPSQLLPSGGGKGRKYKVLIIGIMGAIGALATAISAYLLWRKFTPKHKGSVLQDEISGKKKEITTKLEELPLFKFEKLANATDNFHFGNMLGKGGFGPVYKGHLENGQEIAVKRLSKTSGQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGEEQMLVYEFMPNKSLDSFLFDPLQRKVLDWKKRFNIIEGIARGILYLHRDSRLRIIHRDLKASNILLDDDMNPKISDFGLARIVRGGNDDEANTKRVVGTYGYMPPEYAMEGIFSEKSDVYSFGVLLLEIVSGRRNTSFHNDEQSLSLVGFAWRLWNEGNIITIIDQEIWDPVFEKSMLKCIHIGLLCVQELTKERPSISTVVLMLISEITHLPPPKQVAFVQKQNCQSSESSQKSQFNSNNNVTLSEVQGR* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0197 823 SUPERFAMILY Protein kinase-like (PK-like) 490 797 IPR011009 -
Pvu10g0197 823 Pfam Protein tyrosine and serine/threonine kinase 506 774 IPR001245 GO:0004672|GO:0006468
Pvu10g0197 823 PIRSF SRK 3 823 IPR024171 GO:0004674
Pvu10g0197 823 ProSiteProfiles Bulb-type lectin domain profile. 28 148 IPR001480 -
Pvu10g0197 823 SMART blect_4 34 151 IPR001480 -
Pvu10g0197 823 SMART ntp_6 349 421 IPR003609 -
Pvu10g0197 823 CDD STKc_IRAK 511 777 - -
Pvu10g0197 823 Gene3D - 23 150 IPR036426 -
Pvu10g0197 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 182 IPR036426 -
Pvu10g0197 823 Pfam D-mannose binding lectin 75 177 IPR001480 -
Pvu10g0197 823 Gene3D Transferase(Phosphotransferase) domain 1 581 788 - -
Pvu10g0197 823 MobiDBLite consensus disorder prediction 801 823 - -
Pvu10g0197 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Pvu10g0197 823 ProSiteProfiles Protein kinase domain profile. 505 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0197 823 SMART serkin_6 505 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0197 823 Gene3D Phosphorylase Kinase; domain 1 479 580 - -
Pvu10g0197 823 CDD PAN_AP_plant 335 422 - -
Pvu10g0197 823 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Pvu10g0197 823 Pfam S-locus glycoprotein domain 210 317 IPR000858 GO:0048544
Pvu10g0197 823 CDD B_lectin 34 151 IPR001480 -
Pvu10g0197 823 Pfam PAN-like domain 350 407 IPR003609 -
Pvu10g0197 823 ProSiteProfiles EGF-like domain profile. 284 320 IPR000742 -
Pvu10g0197 823 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 822 - -
Pvu10g0197 823 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 18 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0197 Pvu-Chr10 2942960 2948437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0197 493 823 Receptor kinase-like Gene Family AT4G11530 56.509 1.52e-125 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu10g0197 PK_Tyr_Ser-Thr 7.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0197 - - gmx:100786846 1369.76