Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0195 ATGGCCACCCAAAACGACGCCGCTTCGCCCACCAAGAAGCCCCAACCCATCCCCTGGACCCACCAAGAAACTGTCCACCTCATCCGCGCCTACCAGGAGAAGTGGTACGCGCTCAAGCGCGGGCCCCTCCGCCACAACCAGTGGGAGGAGGTCGCCGTCGTCGTCGCCGCGCGCTGCGGCTACGACCTCGCCTACCCCGCCAAGTCCGCCCTCCAGTGCCGCCACAAGATGGAGAAGCTCCGCCAGCGCCACCGCGCCGAGAAGAAACACGTCGCCGCCACGCTGCGCCCCGCCGCCTGGCAGTACAACGCTCTCATGGAGGACCTCGAACGCGGCCCCCTCCCCATCTCCGCCCTCGCCCCTTTCCAAAACGACACCGATTCGGACCCCGACGAGGACGCCAATTATCAGAACGATAATGATGGCGATGCGAGCTTTGTCAAGTCGAAGAGTATTAGCTGTATTCTCAGCGAGAGGCCCGTGAGAATGAGAAGCGGTGAAAGAGGGTTTTTGAGGGAGCGTGTTGAAGAAGAACGAGGCGAGGACGACGATGACGATCGCGACGACGTTTTGGCGCTTCCGGCGGAGATTAGGGCTTTCGCTGAGAGGTTTATTGGAATGGAGAGTTTGAAGATGGAGATGATGAAGGAAACTGAGAGGTGTAGGTTGGAGATGGAGAAGAAGCGGATCCAGATGATTCTGGACTCGCAGCGGAGGATCGTTGATTCCATTGGGAGAGCGTTTGGGTCTAACAAGAGGATCAAGATCACTCAACAAATCTGA 783 0.5888 MATQNDAASPTKKPQPIPWTHQETVHLIRAYQEKWYALKRGPLRHNQWEEVAVVVAARCGYDLAYPAKSALQCRHKMEKLRQRHRAEKKHVAATLRPAAWQYNALMEDLERGPLPISALAPFQNDTDSDPDEDANYQNDNDGDASFVKSKSISCILSERPVRMRSGERGFLRERVEEERGEDDDDDRDDVLALPAEIRAFAERFIGMESLKMEMMKETERCRLEMEKKRIQMILDSQRRIVDSIGRAFGSNKRIKITQQI* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0195 260 MobiDBLite consensus disorder prediction 117 145 - -
Pvu10g0195 260 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 10 255 - -
Pvu10g0195 260 ProSiteProfiles Myb-like domain profile. 18 81 IPR001005 -
Pvu10g0195 260 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 10 255 IPR044823 -
Pvu10g0195 260 Gene3D - 19 86 - -
Pvu10g0195 260 Pfam Myb/SANT-like DNA-binding domain 18 108 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0195 Pvu-Chr10 2896788 2898617 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0195 19 102 Trihelix Transcription Factor Family AT3G14180 28.571 2.53e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu10g0195 Myb_DNA-bind_4 4.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0195 - - var:108346948 450.284