Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0192 ATGACGTCATCAATTTCTTCCATGGAATTGGAGTCTTCATCGTCCAAACTCCCGCAGATGTACGATGTGCTTATCAACTTTAATGGCGAAGACATCCAAAAGAAATTTGTTTCTCATCTCGATTCTGCCCTCTCTGCTGTTGGCTTCACCACTTTCCTTCACCACCCCAATGCACACAACCCACTTCACATCCAACAACCTGTTCTCAATCTCTCTCGTATAGCAATTGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAGCTTCAACAAATCATCAAATGGCACCAAACTTATTGCCGGCATCTTCTGCCTGTTTATTACGAAATTCAGCCATCTGATGTACGTCTTCAGATGGGTGATTTTGGAAAAGCCTTCAAAGCAACTGCAGAGCAAGCATTCTCAGGACAACAACTGGAGAATGGCATGTCCAGGTGGAGCCACGCACTCACCAAAGCTGCAAATTTATTTGGATGGGATGAGAGCAATCGCAGGAGTGATGCTGAACTAGTGGACAAAATTGTTAAGACCGTTCTTCATCTACCAGTATTGTCTGCTACTAAATTTCCAGTTGGATTACACTCGCACATGGAGGATCTAATTCGAACTATCAAATATAAATCCACGGAAGTTTGTAGCATAGCCATATATGGACAAGAAGGATCTGGTAAAACCACCCTTGCGAAAGCCATCTACCATCAAATTCACGATCCATTCACGGAGAAAAGTTTCATTGAAGATATTGGACAAGTTAGCGAAAGAAGAGGGAATCTTCGTTTACTGGAACAACTCCTTTCAGATGTCCTAAAATCAAAGGTAGAGATAGATAGCTTTGAGATGGGAAGAAGTATGATTCGGGAAAAACTTTCTGGGAAAAGGGTACTCATTGTACTTGACGATGCGCCTGAGTTTAATAGAGAATTACTATGGGAATGGCGTCATTGGTTCGGAGGAGGAAGTGTAATAATCATTACAACAATACCTGAAAACCTACCGAGGATACAGCAAGCTGATTTTGTTTTTCAGGTAAAGTTAATGAACGCAAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAACCAAAACCAAAACAAAAATACCATTTCCTTGCAGAAAAAGTAGTTTCGTATTGTGGAGGACTACCCCTAACTCTTGAAGTCATTGGAAGTTATTTATATGAAAGGACCAAAGAAGAATGGAATTCAGTATTGTTACTATTAGCCAATATTCCCCACCACGATGTTCAAGGGAAATTGAAAATAAGTTTCGACGGTTTACGCAATCAAATGGAAAGAGATTTATTTCTTGATGTATGTTGTTCCTTTGTTGGTAAGAGCAGAACCTATGTTACGAAGATCCTAAATGGCTGTGGAATAGACGCAGATAGTGGAATAAGAGTTCTCATAAAGCATAGTCTCATACAAATTAATAAGAACAACAAATTAATAATGCATTCATTGCTACGACAAATGGGAAGAAAAATTATTCGTGAAATTTCAGGAAAGGAGCCTGAGAACAGTAAATTGTGGTTTGATAAGGATGCAAGATATTCACTGTCTGAGAATACGCTCTTTTCATTTAAGTGCACAAAAGTCATTCAGACATTGCCTACCAGAAGAGATTTCTTCGGACGCTATCCTTTACAGGTAAGAGACCGATCAAGACTGCTGAAATTCGCTGGAGATTCTGAGTACCTTTTTAGGAATCTGAGATGGATCAGTTTGCGAGGGTTTTCTTCAGAATACCTACCTAACCACTTTTATCAGCATTATCCAATAGCCATTGAAATAAAACACAGTCTTCTTCGTTTCGTTTGGAAAGAACCACAGGTTTTGAAGTGGCTAAAAGTCCTTAATCTTAGTCACTCCAAGTACTTGATAGAAACCCCTGACTTTTCCGGACTACCAAGTCTTGCACAGCTCATTCTCAAAGATTGTCCAAGATTATGCAAAGTACACCAATCTATTGGATGTCTCTGCTATCTTACATTGCTAAATTTGCAGGACTGTACAAATCTAAGCAATCTCCCCAGAAAGATATATAAGTTGAAATCCTTAAAAACTTTGATTTTATCTGGTTGTTCGAAGATTGACTTAATGGAAAGAGATATAGTGGGATTGAAATCCTTGATAACTATAATGGCTGAAAATACAGTTACTAAACAATTGCCTTTTACAATTGTAAGCCCAAAAAGCATTGGATATATATTCCTACGTGGATGTGAGGAATTGTCACATAATCTTTTTCCTTCTATCATTCGGTCTCGGATGTGGCCAACAATGAATCCCCTATCTTATACTCATCCCTTCATGGATATGGAGGATAATAGTTGGGATGAAATTGCAGCATTTCTTAGAAGCCTTGCCAAAATCCGAAGTGTTCTGGTGGAATGTGACGCCGAGTTTCATCTATCTGAACAAGTAAAAACTATAGTGGTCGAATATGGTGGAAATATTACAGAATCAGCAATTTCAAAGAATCACCTCAAGTCTTTTCTGACTGGTATTGGAAGATACAAAGAATTCTTCAATACTCTAAGCGATAGCATACCTAAGGTATTTGCAAGCAGTGAGTCATGTGATGTTTCTCTCCCAGGTGACAATGATCCTTATTGGTTGGCCCATATGGGTGATGGACCTTCTGTTTCCTTCACTGTGCCTCAAGATCGTGTCGTGAAGGGAATGGCTTTGTGTGTAGTTTATTTATCAACCTTCGAAATCATTGAACCTGAACTTACTACTGTCTTAATTGTTAATTACACGAAGTGCACATGTCAGATACACAACCATGGCACAGTAATTTCCTTCAATAATGAAGATTGGCCTGACATGATGTCAAATTTAGGATCAGGAGACAAGGTGGAGATTTTTGTGAGTTTGGGTCACGATTTGGTGGTTAAGAACACAACTGTCTATCTTATAAATGACTTAGAAAAGGAGCCTGTGCCAAAGAACAAATCTCTCCTTAAATTCATAAAGAAAACTCTAATGTGA 3012 0.3888 MTSSISSMELESSSSKLPQMYDVLINFNGEDIQKKFVSHLDSALSAVGFTTFLHHPNAHNPLHIQQPVLNLSRIAIVVFTKTYSQSAWCLHQLQQIIKWHQTYCRHLLPVYYEIQPSDVRLQMGDFGKAFKATAEQAFSGQQLENGMSRWSHALTKAANLFGWDESNRRSDAELVDKIVKTVLHLPVLSATKFPVGLHSHMEDLIRTIKYKSTEVCSIAIYGQEGSGKTTLAKAIYHQIHDPFTEKSFIEDIGQVSERRGNLRLLEQLLSDVLKSKVEIDSFEMGRSMIREKLSGKRVLIVLDDAPEFNRELLWEWRHWFGGGSVIIITTIPENLPRIQQADFVFQVKLMNANESLELLSWHAFREPKPKQKYHFLAEKVVSYCGGLPLTLEVIGSYLYERTKEEWNSVLLLLANIPHHDVQGKLKISFDGLRNQMERDLFLDVCCSFVGKSRTYVTKILNGCGIDADSGIRVLIKHSLIQINKNNKLIMHSLLRQMGRKIIREISGKEPENSKLWFDKDARYSLSENTLFSFKCTKVIQTLPTRRDFFGRYPLQVRDRSRLLKFAGDSEYLFRNLRWISLRGFSSEYLPNHFYQHYPIAIEIKHSLLRFVWKEPQVLKWLKVLNLSHSKYLIETPDFSGLPSLAQLILKDCPRLCKVHQSIGCLCYLTLLNLQDCTNLSNLPRKIYKLKSLKTLILSGCSKIDLMERDIVGLKSLITIMAENTVTKQLPFTIVSPKSIGYIFLRGCEELSHNLFPSIIRSRMWPTMNPLSYTHPFMDMEDNSWDEIAAFLRSLAKIRSVLVECDAEFHLSEQVKTIVVEYGGNITESAISKNHLKSFLTGIGRYKEFFNTLSDSIPKVFASSESCDVSLPGDNDPYWLAHMGDGPSVSFTVPQDRVVKGMALCVVYLSTFEIIEPELTTVLIVNYTKCTCQIHNHGTVISFNNEDWPDMMSNLGSGDKVEIFVSLGHDLVVKNTTVYLINDLEKEPVPKNKSLLKFIKKTLM* 1004
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0192 1003 Gene3D - 183 342 IPR027417 -
Pvu10g0192 1003 Gene3D - 14 182 IPR035897 -
Pvu10g0192 1003 CDD AAA 217 338 - -
Pvu10g0192 1003 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 24 980 - -
Pvu10g0192 1003 SUPERFAMILY L domain-like 567 757 - -
Pvu10g0192 1003 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 980 IPR044974 GO:0006952
Pvu10g0192 1003 Pfam TIR domain 21 187 IPR000157 GO:0007165
Pvu10g0192 1003 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Pvu10g0192 1003 SMART till_3 20 160 IPR000157 GO:0007165
Pvu10g0192 1003 Gene3D Ribonuclease Inhibitor 561 869 IPR032675 -
Pvu10g0192 1003 PRINTS Disease resistance protein signature 217 232 - -
Pvu10g0192 1003 PRINTS Disease resistance protein signature 292 306 - -
Pvu10g0192 1003 PRINTS Disease resistance protein signature 384 398 - -
Pvu10g0192 1003 PRINTS Disease resistance protein signature 687 703 - -
Pvu10g0192 1003 SUPERFAMILY "Winged helix" DNA-binding domain 421 522 IPR036390 -
Pvu10g0192 1003 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 163 IPR035897 -
Pvu10g0192 1003 Pfam NB-ARC domain 200 415 IPR002182 GO:0043531
Pvu10g0192 1003 Gene3D - 350 440 IPR042197 -
Pvu10g0192 1003 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 443 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pvu10g0192 Pvu-Chr10 2859613 2863448 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0192 618 733 WRKY Transcription Factor Family AT4G12020 35.345 7.39e-07 51.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0192 - - pvu:PHAVU_010G0291001 1394.79