Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0190 ATGGTCCCATCTTTCACACCAACTTCTACTACACACACATACACTTTTTCCCCTGTTCAAAATCGCCTTTCACAAGGAAAAACAGAGCAAACAGAGAAAACCATGTCTCTTCCAAGATCACGAAGTGAAGAGAAACCCCTTTCAGAAGGAGCACCACCACCATCATCACCACCACCACCTTCATCCTCTTCTTCATGGAATCGGCTACACAACTTCCCTCCTTTAAATCTACACAACAAGACCAGCAAAATTGAAGACAGTGATGAAGATATGTTCACAGTTCCAGATGTGGAAACCACAGCCATTAGTGTTCATTCTGCGTTGACTCTACAAAATAGTAACCTTAATCAACGTAATGTGACAGACCCTCAATTTCAAACGGGTTTTCCTGGAAAGCGTCGCAGGGGAAGAAACCCTGCTGATAAGGAACATAGACGTCTCAAGAGGTTGTTAAGAAATAGAGTTTCTGCTCAACAAGCCCGTGAAAGAAAGAAGGTTTATGTGAATGATTTGGAAGCAAGAGGCAAAGAGTTGCAAGATAAAAATGCTATCTTAGAAGAACGTATCTCTACTTTGATCAATGAGAACACCATGCTTAGGAAGGTTCTTATGAATGCAAGGCCAAAAGTAGACGATAACAATGAACAAAAGCAAGATCAGTTAAGTAAGAGCTAA 675 0.4104 MVPSFTPTSTTHTYTFSPVQNRLSQGKTEQTEKTMSLPRSRSEEKPLSEGAPPPSSPPPPSSSSSWNRLHNFPPLNLHNKTSKIEDSDEDMFTVPDVETTAISVHSALTLQNSNLNQRNVTDPQFQTGFPGKRRRGRNPADKEHRRLKRLLRNRVSAQQARERKKVYVNDLEARGKELQDKNAILEERISTLINENTMLRKVLMNARPKVDDNNEQKQDQLSKS* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0190 224 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 143 206 IPR004827 GO:0003700|GO:0006355
Pvu10g0190 224 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 148 163 IPR004827 GO:0003700|GO:0006355
Pvu10g0190 224 SUPERFAMILY Leucine zipper domain 145 204 IPR046347 GO:0003700|GO:0006355
Pvu10g0190 224 MobiDBLite consensus disorder prediction 62 80 - -
Pvu10g0190 224 MobiDBLite consensus disorder prediction 1 33 - -
Pvu10g0190 224 Pfam bZIP transcription factor 142 201 IPR004827 GO:0003700|GO:0006355
Pvu10g0190 224 SMART brlzneu 141 205 IPR004827 GO:0003700|GO:0006355
Pvu10g0190 224 MobiDBLite consensus disorder prediction 1 83 - -
Pvu10g0190 224 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 61 224 IPR044280 GO:0000981|GO:0045944
Pvu10g0190 224 PANTHER TRANSCRIPTION FACTOR HY5-LIKE 61 224 - -
Pvu10g0190 224 Coils Coil 168 195 - -
Pvu10g0190 224 MobiDBLite consensus disorder prediction 114 143 - -
Pvu10g0190 224 CDD bZIP_HY5-like 155 196 - -
Pvu10g0190 224 Gene3D Single helix bin 164 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0190 Pvu-Chr10 2822209 2825609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0190 124 213 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 74.725 1.20e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu10g0190 bZIP_1 1.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0190 K16241 - gmx:778143 304.679