Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0163 ATGGCCAACCTCAACATGCTCCTCGGACTCTTGTCTGTGTTCCTGTTCCTTCTGATCCCAGTTTCATCTCAGCCTAACCAGATCTTCTATGCTGGATTCAAGGGTGTGGATAGCAACAACATGACCCTTGATGGTGTAGCAGAAATAGAGCCAAGTGGGGTGCTGAAACTCACAAATGATTCAAGTAAGGTGATGGGTCATGCTTTTTATCCAACTGCTCTTCGGTTCAAGAACTCTAGTGATGGTAAAGCTTTCTCCTTTTCTGTCTCTTTTGCTTTGGTTATTGTTCCTGAGTTTCCAAAGCTAGGAGGGCATGGCCTTGCTTTTACAATTGCAAGTTCTAAGGATCTGAAGGCTCTTCCAAGCCAATATCTTGGTCTTCTTAACTCAACTGACATAGGGAACTTCTCCAACCACCTTTTTGCTGTTGAGTTTGACACAGCCCAAGATTTTGAGTTTGGGGACATCAATGATAACCATGTTGGAATTGACATCGATAGCTTGGTATCCAATGCTTCTGCACCTGCTGGTTACTACACTGGGGATCATGATTCTGACAAACAGAATCTCACTCTCAAAAGTGGGCAACCTATTTTGGTTTGGGTTGATTATGATTCTGCTCAAAGTGTTGTTAATGTCACAATTTCTGCATCTTCTACCAAACCCACAAGACCACTCTTGTCCTTTCCTGTGGATCTTTCACCGATTCTTGAGGATTCCATGTATGTAGGATTCTCTGCATCAACAGGTTTGCTTGCTAGCTCCCATTACATCTTGGGTTGGAGCTTCAAAATCAATGGGCCAGCTCCACCCCTTGATCTCTCTTCCCTCCCACAGCTTCCAGGGCCAAAGAGGAAACACACATCTTTGATAATTGGGGTTTCAGTCTCTGGTGTTGTTCTTGCCTTGTTTGCTGTCTTACTCGGCTTCTACATGTACAGAAGGTACAAGAATGCTGATGTTATAGAAGCTTGGGAGCTTGAGATTGGGCCACACAGGTACTCCTACCAAGAGCTCAAGAAAGCAACAAAAGGTTTCAAGGACAAAGAGCTGCTTGGACAAGGTGGATTTGGGAGTGTCTACAAAGGAACATTGCCAAATTCCAATACCCAAGTTGCTGTTAAGAGAATATCACATGACTCCAAACAAGGCCTGAGGGAATTTGTATCTGAAATAGCCAGCATAGGCAGGCTTCGCCACAGGAATCTGGTTCAGCTGCTGGGGTGGTGTCGCCTCCGCGGTGACCTCCTCCTTGTGTATGATTTCATGGCTAATGGGAGCTTAGACAAGTACCTGTTTGATGAACCAGAAAGAATCCTGAGTTGGGAGCAAAGGTTTAAGGTAATCAAGGATGTTGCTTCTGCCCTTTTGTATCTGCATGAGGGCTATGAGCAGGTGGTGATACATAGGGATGTGAAGGCTAGCAATGTGCTGCTAGATGGTGAACTCAATGGAAGACTAGGAGATTTTGGATTAGCAAGGTTGTATGAACATGGGGCTAACCCAAGTACCACAAGGGTGGTGGGGACCTTAGGCTATTTGGCTCCCGAGGTGCCTAGGACAGGGAAGGCTACTCCTGGCTCAGATGTTTTTGCATTTGGTGCACTTTTACTGGAGGTGGCATCTGGGCTCAGGCCACTTGATCCAAAGGCAATGCCAGAAGATTTAGTTTTGGTTGATTGTGTGTGGAACAAGTACAAGCAAGGGAGAATACTTGATGTGGTGGACCCTAGACTAAATGGTGATTTTAATGAAAGAGAGGTGCTCATGGTGTTGAAATTGGGGCTTCTGTGTTCAAATGGTTCTGCCACTGCTAGGCCTAGCATGAGACAGGTGGTGAGGTTTTTGGAGGGAGAAGTTGGTGTGCCAGATGAGTTGAGTAGGCCAGGAGAGACATGTTCTCAGGAGGGTTTTGATGAATTCTTGCACTTACTTGAATCTTCTTCCTTTGATCAGATGAGCAGAAGCTCCTATGATAGAAGTAGATACATGGGGAGTAGTTGTCCTTCTTTTACTGATACATCTCTTTTTACTCCCCATGGTAAAGGAGAAACAATTTGA 2061 0.4517 MANLNMLLGLLSVFLFLLIPVSSQPNQIFYAGFKGVDSNNMTLDGVAEIEPSGVLKLTNDSSKVMGHAFYPTALRFKNSSDGKAFSFSVSFALVIVPEFPKLGGHGLAFTIASSKDLKALPSQYLGLLNSTDIGNFSNHLFAVEFDTAQDFEFGDINDNHVGIDIDSLVSNASAPAGYYTGDHDSDKQNLTLKSGQPILVWVDYDSAQSVVNVTISASSTKPTRPLLSFPVDLSPILEDSMYVGFSASTGLLASSHYILGWSFKINGPAPPLDLSSLPQLPGPKRKHTSLIIGVSVSGVVLALFAVLLGFYMYRRYKNADVIEAWELEIGPHRYSYQELKKATKGFKDKELLGQGGFGSVYKGTLPNSNTQVAVKRISHDSKQGLREFVSEIASIGRLRHRNLVQLLGWCRLRGDLLLVYDFMANGSLDKYLFDEPERILSWEQRFKVIKDVASALLYLHEGYEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYEHGANPSTTRVVGTLGYLAPEVPRTGKATPGSDVFAFGALLLEVASGLRPLDPKAMPEDLVLVDCVWNKYKQGRILDVVDPRLNGDFNEREVLMVLKLGLLCSNGSATARPSMRQVVRFLEGEVGVPDELSRPGETCSQEGFDEFLHLLESSSFDQMSRSSYDRSRYMGSSCPSFTDTSLFTPHGKGETI* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0163 686 CDD STKc_IRAK 352 618 - -
Pvu10g0163 686 SUPERFAMILY Protein kinase-like (PK-like) 328 640 IPR011009 -
Pvu10g0163 686 ProSiteProfiles Protein kinase domain profile. 346 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0163 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Pvu10g0163 686 PANTHER - 11 659 - -
Pvu10g0163 686 SMART serkin_6 346 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0163 686 Gene3D Phosphorylase Kinase; domain 1 331 422 - -
Pvu10g0163 686 Pfam Protein tyrosine and serine/threonine kinase 349 616 IPR001245 GO:0004672|GO:0006468
Pvu10g0163 686 CDD lectin_legume_LecRK_Arcelin_ConA 30 267 IPR001220 GO:0030246
Pvu10g0163 686 Gene3D - 28 267 - -
Pvu10g0163 686 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
Pvu10g0163 686 Pfam Legume lectin domain 29 277 IPR001220 GO:0030246
Pvu10g0163 686 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 285 IPR013320 -
Pvu10g0163 686 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 11 659 - -
Pvu10g0163 686 Gene3D Transferase(Phosphotransferase) domain 1 423 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0163 Pvu-Chr10 2529834 2531894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0163 21 685 Receptor kinase-like Gene Family AT3G55550 57.965 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu10g0163 PK_Tyr_Ser-Thr 1.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0163 - - gmx:100801247 1156.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0163 10 2529834 2531894 Pvu8g0963 8 9731145 9733166 PCT