Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0160 ATGGTTTATGAATGCATGGATAATTTGCTGTGTGATGAGGTGTGGCTTTCGAATAATTCTGAAAATACCTTTGAAGAAGTTGGTGACTTTGTTGTTTCACTCAAGAGTTATGAAAACAAAGAGTTTGAAGAGGCTTTTACACTGTATCTAGAGAAGGAGGCTTCTTCTTTGCCTGAACACAACTATGCAAAGTACTTACACTCCAACAATTTGTTTCTTCCTAGGTGCAGAGTTATTCAATGGCTTGTCAAGTGTGGAAGTCACTTTAATCTTTCTTTTGGAACAGTTTTCTTGGCTGTTAATTATCTTGATCGCTTTGTGTCCATTTGTCAAAGCAATGATTGGAAATACTGGATGCTTGAATTGCTTTCTATTGCTTGCTTATCAGTTGCCATAAAGTTCAATGAGAAGTCACCACTTTCCTTGCATGAAATTCAGGTGGAGGGCTTGAATTACTCATTCCAATCAAGTGTAATTTTGAAAATGGAGCTGATCCTGTTGAAGGCATTGGGGTGGCACCTTAACTCTGTCACAACTTATTCTTTTGTGGAAATGCTGGATATTCATTTCTTCCAATCTCATCTTTATCAGAAGCTCATTTCACCAGCCACTCAACTCCTTCTCCAAGCTACTTTAGATCAGAAAATGGTGGAATTCAGGCCAAGCACTGTTGCCATATCTGCACTGTGGTGCAGTCTAGACCAGTTATATCCACCAACAGCAGATAGTTACATTGCTTATATTCTCAGACTCTTGAGCCAAACTCAGAAGGATGATATCATCAAGTGTCATGAGTTGATGCAAAGACAAGCTCCAGTGTGCTGTGAAAATCACCACCATTGCCCTTTAAGCCCAACAACAGTACTGTTCAACACATGA 879 0.3936 MVYECMDNLLCDEVWLSNNSENTFEEVGDFVVSLKSYENKEFEEAFTLYLEKEASSLPEHNYAKYLHSNNLFLPRCRVIQWLVKCGSHFNLSFGTVFLAVNYLDRFVSICQSNDWKYWMLELLSIACLSVAIKFNEKSPLSLHEIQVEGLNYSFQSSVILKMELILLKALGWHLNSVTTYSFVEMLDIHFFQSHLYQKLISPATQLLLQATLDQKMVEFRPSTVAISALWCSLDQLYPPTADSYIAYILRLLSQTQKDDIIKCHELMQRQAPVCCENHHHCPLSPTTVLFNT* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0160 292 Gene3D - 59 175 - -
Pvu10g0160 292 ProSitePatterns Cyclins signature. 75 106 IPR006671 -
Pvu10g0160 292 PANTHER CYCLINS 33 286 IPR039361 -
Pvu10g0160 292 Pfam Cyclin, N-terminal domain 45 175 IPR006671 -
Pvu10g0160 292 SMART cyclin_7 80 168 IPR013763 -
Pvu10g0160 292 SUPERFAMILY Cyclin-like 42 175 IPR036915 -
Pvu10g0160 292 Pfam Cyclin, C-terminal domain 177 271 IPR004367 -
Pvu10g0160 292 Gene3D - 50 265 - -
Pvu10g0160 292 CDD CYCLIN 75 167 IPR013763 -
Pvu10g0160 292 PANTHER CYCLIN-D7-1-RELATED 33 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0160 Pvu-Chr10 2501578 2504669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0160 28 271 Core Cell Cycle Gene Families AT1G70210 29.200 1.80e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0160 K18813 - gmx:100792420 369.007