Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0156 ATGGCACAGGCAGTGGGGCGGAGCAGGGTGGTCGGAGAATACGTGGTGGGGAGGCAAATCGGCTCGGGGTCGTTCTCGGTGGTGTGGCACGGAAGGCATAAGGTTCACGGAACCGAGGTTGCAATAAAGGAGATCGCCACACTTCGCCTCAATAAAAAGTTGCAGGAGAGCCTCATGTCCGAGATTTACATCTTGAAGCGGATTAACCACCCTAACATAATCTGTTTGCACGATATCATTCAGGTTAGGTGTTGA 255 0.5216 MAQAVGRSRVVGEYVVGRQIGSGSFSVVWHGRHKVHGTEVAIKEIATLRLNKKLQESLMSEIYILKRINHPNIICLHDIIQVRC* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0156 84 SUPERFAMILY Protein kinase-like (PK-like) 9 83 IPR011009 -
Pvu10g0156 84 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Pvu10g0156 84 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 1 81 IPR045269 GO:0004674|GO:0006914
Pvu10g0156 84 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1B 1 81 - -
Pvu10g0156 84 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Pvu10g0156 84 Pfam Protein kinase domain 14 81 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0156 84 ProSiteProfiles Protein kinase domain profile. 14 84 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0156 Pvu-Chr10 2450777 2451432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0156 7 83 CBL-interacting serine-threonine protein kinases AT5G01820 37.179 2.21e-13 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Pvu10g0156 Pkinase 2.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0156 K08269 - pvu:PHAVU_010G015200g 170.629