Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0155 ATGAGTGGCAGAGAGAGTGACCGACGACGAGCGCGAGCGGTGGAGTGCGCGACCGACATTGATGTTCCTGGGAAGATACATCTTGTGTTAGAATACTGTAAAGGGGGAGATCTTTCCTTGTACATTCAACGCCATGGAAGGGTACCAGAGGCAACTGCAAAGCATTTTATGCAGCAGCTGGCTGCTGGTCTACTAGTTCTTCGAGATAATAACCTTATTCATCGAGACCTGAAACCACAGAACCTTCTTCTCTCCCAAAATGATGAGAAGTCAGTGCTGAAGATTGCTGACTTTGGATTTGCAAGATCTCTGCAACCTAGGGGCCTTGCTGAAACCTTGTGTGGTTCACCACTGTACATGGCTCCAGAAATCATGCAACTACAGAAGTATGATGCTAAGCTGGTTACAGGAAGAACACCTTTTACCGGAAACAATCAAATACAGTTACTACAGAATATTTTGAAATCGACAGAATTGCAGTTTCCATCTGATTGCCCAAGTCTGAGTTTTGAATGCAAAGATTTGTGTCAGAAATTGCTACGTCGGAATCCAGTGGAACGTCTAACTTTTGAAGAATTTTTTAACCACCCATTTCTTTCTCAGAAGCAAAGAGAACAGGATGACGAGCCTTTGAGGAGTAGAAGTTCTTCAAGGCTGGTTGGTGGGTTTTATTCTACTGTGTCTGACCCTTTGAGAAGAACTGACGAAAATTATCAAGAAGATTGTTTGCCTTTCATCCTAGATGACGACTCTGGTGGTGGCCCTGAGGGGAGTCCATCCTTTTCAAGAAAAAAACCCTCAATAAAGTCCACCTATGGATTTGATCTAAATTCTAAACTAGATAAAGCAGATTCAACATCTCCTATGTATAATAACATAAATTCTAATTCTGGGTTTGTTAGTGTGACACAAAGATCTGATAACACTAATAGAAGATTGGACAACCATAACATTTCAAGAAATCTCACTGATCCTCTAGAATCTCCAGAACAGATGTTCGCAAATCCTTATCCAAAAGTTACGGATTCCCTGGAGAATATTGATCAAGAATATGTTCTGGTGCCAGGGCTCCCTGATGTTTCGTCATCTTCAGTGGGTGCTTTACGGCCCAGCCATACTCCATATAGGTCTGGTAGTTTACCACAAGAGTCTTCTAGTTCAATCACCAGACCTAGTGCTCCAATGCCAATAGTTGGTGTACATACAAATAGCACGTACCAAGTTGGAAGTTCAGGAAGTCAGGACTCTGCTCCTGGGACTTCGCTTGGATCAATGGATATAGGTGATGAACAGCCATCAGCTCATTGCATGACTAGGGTGAAATCATTGCAACAGTGTGCATCTGCCATCACTGAGTTAGTTAATGAAAAGCTTGTAATTCTTGCAATCTGGAAGCAAGCGCTGCACATATGCCATACACAAGCTGCCTCAGCCATGGAAGGAAGTCCAAACCAAGAAACTTCAAGATATAGAAAGGGTGCCAGCAGGAAGCATGGCAGCCCTGATTCGGAAGAATGCCTTGATGGAAACATCCTAGAGCCAAAGGATATATTATCTAAAATTGAAAGTGATTTTTTGAGGGAATATGAGCACGCTGAAGAACTCGCCAAGACCATTGAGCCTGGAAACACTGAGATGCCAGATGCAATGGAGACAATATTTCAATCTGCCCTTGCTTTTGGAAGGCATGGGGGTGTAGAAGAACTCATGGGTGACATGGAAAGTGCAGCTGCATTGTATTCAAAAGCTGTTCGTCTGTTAGTTTTCCTTCTAGTGGAAGGACCATCCCTTATTCTTAATCCTCCGTTTTCACTGACAAACTCAGATCGTTACAGACTTCGAAATTACATTGATATTCTTAATAACAGACAAGGTTATTCAAGGTCCCAGCGAATGGCACTGCTGAAATGTGATGACAGTCAAGGTATCCTTAAGGACAAATTTTAG 1947 0.4263 MSGRESDRRRARAVECATDIDVPGKIHLVLEYCKGGDLSLYIQRHGRVPEATAKHFMQQLAAGLLVLRDNNLIHRDLKPQNLLLSQNDEKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKLVTGRTPFTGNNQIQLLQNILKSTELQFPSDCPSLSFECKDLCQKLLRRNPVERLTFEEFFNHPFLSQKQREQDDEPLRSRSSSRLVGGFYSTVSDPLRRTDENYQEDCLPFILDDDSGGGPEGSPSFSRKKPSIKSTYGFDLNSKLDKADSTSPMYNNINSNSGFVSVTQRSDNTNRRLDNHNISRNLTDPLESPEQMFANPYPKVTDSLENIDQEYVLVPGLPDVSSSSVGALRPSHTPYRSGSLPQESSSSITRPSAPMPIVGVHTNSTYQVGSSGSQDSAPGTSLGSMDIGDEQPSAHCMTRVKSLQQCASAITELVNEKLVILAIWKQALHICHTQAASAMEGSPNQETSRYRKGASRKHGSPDSEECLDGNILEPKDILSKIESDFLREYEHAEELAKTIEPGNTEMPDAMETIFQSALAFGRHGGVEELMGDMESAAALYSKAVRLLVFLLVEGPSLILNPPFSLTNSDRYRLRNYIDILNNRQGYSRSQRMALLKCDDSQGILKDKF* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0155 648 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 20 622 IPR045269 GO:0004674|GO:0006914
Pvu10g0155 648 MobiDBLite consensus disorder prediction 364 394 - -
Pvu10g0155 648 MobiDBLite consensus disorder prediction 247 266 - -
Pvu10g0155 648 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1B 20 622 - -
Pvu10g0155 648 Gene3D Transferase(Phosphotransferase) domain 1 11 238 - -
Pvu10g0155 648 SUPERFAMILY Protein kinase-like (PK-like) 23 388 IPR011009 -
Pvu10g0155 648 Pfam Protein kinase domain 23 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0155 648 MobiDBLite consensus disorder prediction 362 394 - -
Pvu10g0155 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 72 84 IPR008271 GO:0004672|GO:0006468
Pvu10g0155 648 SMART serkin_6 14 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0155 648 MobiDBLite consensus disorder prediction 476 508 - -
Pvu10g0155 648 MobiDBLite consensus disorder prediction 309 331 - -
Pvu10g0155 648 ProSiteProfiles Protein kinase domain profile. 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0155 648 MobiDBLite consensus disorder prediction 490 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0155 Pvu-Chr10 2437128 2443461 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0155 26 219 EF-hand Containing Proteins AT2G35890 33.333 6.07e-28 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Pvu10g0155 Pkinase 4.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0155 K08269 - gmx:100791596 1071.61