Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0132 GTTTCTCTCAAATTTGTGTACTTGGCAGTAGGATCTGGGGTGGCAGCTTTCCTTCAGGTGAGTTGCTGGATGGTGACTGGGGAAAGACAGGCTGCAAGAATAAGAGGACTGTATTTGAAAACTATTCTGAGACAAGACATTGCTTTCTTTGACAAGGAAACAAACACTGGTGAAGTCATAGAAAGAATATCAGGTGACACTGTTCTCATTCAAGATGCTATGGGAGAGAAGGTTGGGAAATTTGTGCAGTTGATAGCAACATTCATAGGGGGCTTTGCAATAGCATTTGCGAAAGGGTGGCTTCTTACAGTTGTGATGTTGTGCATTCTTCCACTCCTTGTTCTGTCAGGGGCTGCCATGGCCATCATCCAAGGTAGGATGGCTTCTAGAGGTCAAGCTGCCTATGCAAAAGCTGCACACCTGGTTCAGCAGACAATTGTCTCAATAAGAACAGTTGCATCCTTTACTGGGGAAAAACAAGCAGTGTCTGATTACAGAAAATTTCTTGTAGAAGCTTATGTAACTGGCGTTCATGAAGGTTCTGTTGCTGGGGTGGCCCTTGGCACAGTTATGCTTCTTGTTTTCAGTGGTTATGCTTTGGCAGTGTGGTTTGGCGCAAAGATGATAATGGAAAATGAAAAAAAATATAATGGGGGCACGGTGCTCAATGTCATTGCTTCTTTATTAACTGCTTCAATGTCTCTTGGGGAGGCATCCCCTATCATGAGTGCATTTGCTGCGGGTCAAGCTGCTGCATACAAAATGTTTGAAGCAATTGCGAGGAAGCCTGAGATAGATGCTTATGATCCAAATGGGAAAATATTAGAGGATATTGAAGGTGAAATAGAGTTGAGGGATGTTTGTTTCAGTTATCCAGCGAGGCCTGAGGAGTTGATACTCAATAGGTTCTCTCTTGATATACCAAGTGGTACAAGTGTTGCACTTGTGGGACAAAGTGGATGTGGAAAATCCACGGTTATCAGTTTGATAGAGAGATTCTATGATCCTCAAGAAGGTGAAGTTGTTATTGATGGCATTAACCTGAAAGAGTTTCAGCTTAGTTGGATGAGGGGGAAAATTGGCCTTGTTAACCAGGAGCCAGTGTTGTTTGCATCAAGCATTATGGATAACATTGCATATGGAAAGGAGGGAGCCACAATTGAAGAGATAAAATCAGCATCTGCACTTGCAAATGCTACAAAATTCATCCATAAACTGCCACAGGGATTGAACACAATGGTTGGTGAACAAGGAACTCAACTCTCTGGTGGACAGAAGCAGCGCATTGCCATAGCGAGAGCAATCCTAAAGGATCCAAGAATTCTACTTCTGGACGAAGCTACAAGTGCCCTTGATGCAGAGTCTGAAAAGACAGTGCAAGAGGCTCTTGACAGGGTCATGGTTAACCGAACTACTGTTGTTGTGGCACATCGGTTGAGCACAGTGAGGAATGCTGATACCATTGTTGTAATTCATAGAGGGAAGGTGGTTGAAAAAGGAACACACTCAGAACTAGTCAAGGATCTGGAGGGAGCTTACTCTAAATTGATACGTTTACAACAAGTAAACAAGGAATCAGAAGAAACTACAAGTTATGACAGCAAGAGTGAAGTTTCTATGGAATCCTCTACACAGTTAACCAAAAAGATGTCAACTAGGAGATCTATTAGTAGGGGATCCTCTTTGGGGAGTAGTAGCCGCCACTCATTTTCTCTTTCCTCTGGTTTACCCACGGGTGCTAGTTTCCCTGATAATGAAGGTGATGACCCATTACTCGAAAGACAAGCACAAGAGGTTTCACTCCTCCGGCTTGCTTCCCTCAACAAACCAGAGATTCCAGTTCTTCTGATTGGATGTCTAGCTGCCATAGCAAATGGTGTTATACTTCCCATATTTGGGGTGTTGATTTCCAGTGTGGTCAAAACATTTTATGAACCAGTTGATGAGATGAAAAAGGACTCCAAATTTTGGGCACTTATGTTCGTGGTTCTTGGTGTTGCATCATTGTTGGTGATTCCAGCTCGAGCATACTTTTTTTCTGTGGCTGGATGCAAGTTAATCCAACGTATCAGGGTAATATGTTTTGAGAAAGTGGTGAACATGGAGGTTGGTTGGTTTGATGAGCCAAGCAATTCAAGTGGTGCCATTAGTGCAAGGCTCTCAGCCATTGCTGCTTCTGTGCGCACCCTTGTTGGTGATGCACTGGGGCTGTTGGTCCAAAATTTAACATGTGCCTTGGCAGGTTTGATTATTGCTTTCATTGCATGCTGGCAGTTGGCTTTGATTATTCTTGTCTTGATTCCCCTTATTGGTGCAAATGGCTATGTTCAAACAAAATTCATGATGGGGTTCAGCAAAGATGCAAAGATGATGTACGAGGAAGCAAGCCAAGTTGCTAAAGATGCAGTTGAAAATATAAGAACAGTAGCTTCTTTCTGTGCTGAAGATAAGGTCATGGAATTGTATAGGAAGAAATGTGAAGACCCCATGAAAACAGGGATATGGCAAGGGTTGATCAGTGGAATAGGATTTGGGGTTTCATTTTTCTTACTATTTTGTGTCTATGCAACTAGTTTCTATGCAGGAGCTAGACTAGTGGCCGCTGGAGAAACATCATTCTCCGAAGTTTTTCGGGTTTTCTTTGCTTTAACTATGGCAGCTATTGGAGTTTCCCAGTTTAGCACAATTTCTCCTGATTCTGGCAAAGCCAAATCGGCTGCGGCTGCCATATTTGGAATAATTGATAAGAAATCAGAGATAGATCCAAGTGACGAGACTGGTACCACATTGGATATAGTTGAGGGAGAAATTAAGCTTCACCATGTGAATTTCAAGTATCCATCAAGGCCAAATGTACAGATTTTTCGAGACCTTAACTTGGTTATCCATTCTGGCAAGACAGTGGCCCTTGTTGGTGAAAGTGGAAGTGGAAAATCAACAGTGATTGCGTTGTTGCAGAGATTTTATGTTCCCAATGCAGGTGAAATCACACTTGATGGTGTACCAATTGGGGACTTACAACTGAAGTGGTTTAGGCAGCAAATGGGTTTGGTAAGTCAAGAGCCAGTATTGTTCAATGATACTATTCGTGGTAACATTGCTTATGGGAAGGGAGGTGAAGCAACTGAAGCAGAAATCATAGCAGCTGCAAAACTAGCTAATGCCCATGTCTTTATTAGTGCCTTACAACAGGGTTATGACACTGTAGTGGGAGAAAGGGGAACCCAATTATCTGGTGGGCAGAAGCAAAGGGTAGCCATTGCCCGTGCTTTGATCAAAAGTCCAAAGATATTGCTCCTAGACGAAGCCACAAGTGCATTAGACGCTGAGTCAGAGAGAGTTGTTCAGGATGCATTGGACAAAGTGATGGTGAATAGGAGCACTGTGGTTGTGGCACATCGTCTATCTGCAATAAAAAATGCAGATTTGATTGGTGTTGTGAAAGATGGAGTGATAGTGGAGGAGGGAAGCCACGAAACACTTGTTAGAGTGAAGGATGGGTTTTATGCTTTCTTAGTCCAACTTCACTCAAATGCTTCAAAAACTAGAGTTCCATGA 3558 0.4283 VSLKFVYLAVGSGVAAFLQVSCWMVTGERQAARIRGLYLKTILRQDIAFFDKETNTGEVIERISGDTVLIQDAMGEKVGKFVQLIATFIGGFAIAFAKGWLLTVVMLCILPLLVLSGAAMAIIQGRMASRGQAAYAKAAHLVQQTIVSIRTVASFTGEKQAVSDYRKFLVEAYVTGVHEGSVAGVALGTVMLLVFSGYALAVWFGAKMIMENEKKYNGGTVLNVIASLLTASMSLGEASPIMSAFAAGQAAAYKMFEAIARKPEIDAYDPNGKILEDIEGEIELRDVCFSYPARPEELILNRFSLDIPSGTSVALVGQSGCGKSTVISLIERFYDPQEGEVVIDGINLKEFQLSWMRGKIGLVNQEPVLFASSIMDNIAYGKEGATIEEIKSASALANATKFIHKLPQGLNTMVGEQGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEKTVQEALDRVMVNRTTVVVAHRLSTVRNADTIVVIHRGKVVEKGTHSELVKDLEGAYSKLIRLQQVNKESEETTSYDSKSEVSMESSTQLTKKMSTRRSISRGSSLGSSSRHSFSLSSGLPTGASFPDNEGDDPLLERQAQEVSLLRLASLNKPEIPVLLIGCLAAIANGVILPIFGVLISSVVKTFYEPVDEMKKDSKFWALMFVVLGVASLLVIPARAYFFSVAGCKLIQRIRVICFEKVVNMEVGWFDEPSNSSGAISARLSAIAASVRTLVGDALGLLVQNLTCALAGLIIAFIACWQLALIILVLIPLIGANGYVQTKFMMGFSKDAKMMYEEASQVAKDAVENIRTVASFCAEDKVMELYRKKCEDPMKTGIWQGLISGIGFGVSFFLLFCVYATSFYAGARLVAAGETSFSEVFRVFFALTMAAIGVSQFSTISPDSGKAKSAAAAIFGIIDKKSEIDPSDETGTTLDIVEGEIKLHHVNFKYPSRPNVQIFRDLNLVIHSGKTVALVGESGSGKSTVIALLQRFYVPNAGEITLDGVPIGDLQLKWFRQQMGLVSQEPVLFNDTIRGNIAYGKGGEATEAEIIAAAKLANAHVFISALQQGYDTVVGERGTQLSGGQKQRVAIARALIKSPKILLLDEATSALDAESERVVQDALDKVMVNRSTVVVAHRLSAIKNADLIGVVKDGVIVEEGSHETLVRVKDGFYAFLVQLHSNASKTRVP* 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0132 1185 Pfam ABC transporter transmembrane region 615 887 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu10g0132 1185 Pfam ABC transporter transmembrane region 2 233 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu10g0132 1185 Gene3D ABC transporter type 1, transmembrane domain 3 911 IPR036640 GO:0005524|GO:0016021
Pvu10g0132 1185 SMART AAA_5 964 1158 IPR003593 -
Pvu10g0132 1185 SMART AAA_5 309 495 IPR003593 -
Pvu10g0132 1185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 928 1173 IPR027417 -
Pvu10g0132 1185 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 243 - -
Pvu10g0132 1185 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 247 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu10g0132 1185 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 1 1179 - -
Pvu10g0132 1185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 271 520 IPR027417 -
Pvu10g0132 1185 ProSitePatterns ABC transporters family signature. 421 435 IPR017871 GO:0005524
Pvu10g0132 1185 Pfam ABC transporter 300 449 IPR003439 GO:0005524
Pvu10g0132 1185 Pfam ABC transporter 956 1105 IPR003439 GO:0005524
Pvu10g0132 1185 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 616 902 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu10g0132 1185 CDD ABC_6TM_Pgp_ABCB1_D2_like 605 920 - -
Pvu10g0132 1185 ProSitePatterns ABC transporters family signature. 1077 1091 IPR017871 GO:0005524
Pvu10g0132 1185 PANTHER - 1 1179 - -
Pvu10g0132 1185 SUPERFAMILY ABC transporter transmembrane region 3 266 IPR036640 GO:0005524|GO:0016021
Pvu10g0132 1185 CDD ABC_MTABC3_MDL1_MDL2 282 520 - -
Pvu10g0132 1185 MobiDBLite consensus disorder prediction 535 575 - -
Pvu10g0132 1185 Gene3D - 928 1183 IPR027417 -
Pvu10g0132 1185 Gene3D - 280 537 IPR027417 -
Pvu10g0132 1185 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 937 1174 IPR003439 GO:0005524
Pvu10g0132 1185 MobiDBLite consensus disorder prediction 524 575 - -
Pvu10g0132 1185 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 282 518 IPR003439 GO:0005524
Pvu10g0132 1185 SUPERFAMILY ABC transporter transmembrane region 603 922 IPR036640 GO:0005524|GO:0016021
Pvu10g0132 1185 CDD ABC_MTABC3_MDL1_MDL2 937 1175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0132 Pvu-Chr10 1998181 2006896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0132 7 1176 Calmodulin-binding Proteins AT2G36910 44.200 0.0 970
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0132 K05658 - gmx:100800034 1793.09