Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0129 ATGGATGCTATCGTTCACAAGCTTCCTCAAGGCCATGGGATGCCAAATGATTTGAAGAAGGAATTTGTTAAGAAATTGACAGATTCTAATATGATCAGATGCAATGAGAGTGGTCCATTTACTCCTTCATTCGCCAAGCATCCCAGCAACAGCATAAGTAGAAAATTGTCTCTTCAAGAACCACTAGAAGTTTATTTTGGTTCCCATGAGAGTGGCTTTAATCCAGAACCAAGTCACGTCCAATCTAAGAAACTGAAATTAAGAACAGAAAAAGGGCATTCACCATTGAAGCTGATGATACGCTTACGAAGGATGCTTTCATTGCCTGATCTCCAATCCTTTTCCTATGGTTTTCAGAATGGGGAGTTCCCTGATATTTCATCTGTAACTGAGCCAAAGCCAAGAGTAGCTTCTGGGGATGGAACATTGAGTTCTGAGAACATTGTTCATCAGAAAAAGAAGCTTGACCTTCATTTACATTCAAAAACTCAGCTTCAATTAGATACACCAGTAGAAAATTTGATTCAGAAACACCTTGGCAGTGTGGATGAAAATGATCTACTGATTAGTAATATTGTTGAACAAGGATCAGACTGTAGCAAGGTGGGCATCATGACAACTGATGATTTTGGACATAGTTCTTTTAAAAGTGGTGACACCTTTAATGACCAAGAAATGATTGAGCCAATAAAACAAAGCATGGCTGCAATAGAAGAATCAGTGAATCCAAAATTGATTACTGAACCCGACAATGGACTAGAAAACATTATGGAGCAACAAGAAGCTATAATGGATTTCCTTAAAGTGAAAGACAGCACAGAGAATGCTCAAAAGGTGGAGATCCAAAGCAAGCAGTTGATGAACTATGACATTCTTCCTGTATCTCATATCCCTACAAGAGACAAAGCTGAGTTTAATTATGTGAAATATGTACTTGAGATATGTGGACTGACTGGTAAAGAGTGCCTTTCAGCATGGCATTCAAGTAACCACCCAGTTGATCCATTGCTCTATGAAGAAATGGAGAGTGACCTTGATTTCTGCAGTTATGGGGGCAGTGGCCAGTGTAATCACCATGTATTGTTTGATTTAATCAATGAGTCATTGTTGGAACTTTCTGGGAGGTCTTTCTGCTACTGTTCTATACCACTTTCACCATCTCATCCAATGCCAAAAGGGTTTCACAATCTTCATCAAGTGTGGACTCATATGAACAAGTCCCTGTGCCTCAGATCCAAAACTGGCCTAACAATAGATGATCATGTAAGTCGTGACCTAGAAAGGCGTGATGGGTGGGTGAACCCTCAAATTTTTGCACAGTGTGTCAGTTTGGAGCTTGAAGAACTGATTTTACAAGATCTTGTGGAGGAAATGTCAAGTGACTTAGCATGCATTTAA 1398 0.3956 MDAIVHKLPQGHGMPNDLKKEFVKKLTDSNMIRCNESGPFTPSFAKHPSNSISRKLSLQEPLEVYFGSHESGFNPEPSHVQSKKLKLRTEKGHSPLKLMIRLRRMLSLPDLQSFSYGFQNGEFPDISSVTEPKPRVASGDGTLSSENIVHQKKKLDLHLHSKTQLQLDTPVENLIQKHLGSVDENDLLISNIVEQGSDCSKVGIMTTDDFGHSSFKSGDTFNDQEMIEPIKQSMAAIEESVNPKLITEPDNGLENIMEQQEAIMDFLKVKDSTENAQKVEIQSKQLMNYDILPVSHIPTRDKAEFNYVKYVLEICGLTGKECLSAWHSSNHPVDPLLYEEMESDLDFCSYGGSGQCNHHVLFDLINESLLELSGRSFCYCSIPLSPSHPMPKGFHNLHQVWTHMNKSLCLRSKTGLTIDDHVSRDLERRDGWVNPQIFAQCVSLELEELILQDLVEEMSSDLACI* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0129 465 Pfam Domain of unknown function (DUF4378) 304 457 IPR025486 -
Pvu10g0129 465 PANTHER DUF4378 DOMAIN PROTEIN 1 465 - -
Pvu10g0129 465 PANTHER PROTEIN TRM32 1 465 IPR044257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0129 Pvu-Chr10 1969596 1971366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0129 294 451 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 41.040 1.29e-31 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0129 - - pvu:PHAVU_010G012600g 948.347