Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0128 ATGACTGAGGAGAAAGCAGAGCAGCTTTGTTTGAAGAATAAGCAAACCTATGCTGCTTCTAGTTCTTCTATATCAGATGGAAGTGGCAGTGCTATTCCCACATCATCAAGGAAAACGGGATCAGCATTGCCGTCTAATAGGAGGACCACTGGCCCTGTTAGAAGGGTAAAGGATGGTTGGACGGAAAAGGAGGATGAAACATTAAAGAATGCTGTTGAAGTTTTTAATGGCAAGAATTGGAAGAAAATAGCTGCGTTTTTTCCGGATAAATCAGAAGTTCAATGTCTTCACAGATGGAAAAAAGTTCTCAATCCTGAACTTATTAAAGGACATTGGACAAAGGAGGAGGATGATAAAATAGTTGAATTGGTGTGTATACATGGACCTTCAAAATGGTCTTTCATATCCAAGTCTTTGCCTGGTCGAATAGGAAAACAGTGCCGAGAACGATGGTGCAATCATCTTTGTCCAGACATAAAGAAGGATCCCTGGACATTGGAGGAGGAATTAGCCCTTATGAAAGCTCATTGTATACATGGCAACAAATGGGCTGAAATAGCCAAGGTTCTTCCTGGAAGGACTGATAATGCAATAAAGAATCATTGGAATGGTTCTTTGAAGAAAAGGAAGGATTTCTATTTAGCTAATGGAAGACTTCCACCCATTCTAAAGAGCAGTACGGAAGTTACTGTCAAAGATACAGTCACACATTCTACAACTAACACAATTCATGTTTGTTCAAATAAAGGATTAGATGCCACTGTTGCATCATCATCTAAAACTACAGACATTGCTAAGCTTGATAGCAGTGATAAGAATCAACTAGAATCCTCAGGAATAGTAAGAGAGGTTGAATATTCTTCAAGTCTTCCACCAAAAAAATGTGCTGATTCTGATTGTGTAAACTGCAATAGATTATTCCACGAAGGTCTCCGCTGTAGTAACATGGAATCAGGGTCAGGAGATAATTTTAAAATAATCAAGGCGCCAAAATTTGTGAATCCTGGCCAAAATGCTAACCCAAGAATTGATCATTACCTGAATAATAGTGATATGAACGGTGACAGATCAACCAGAATTTTTTATTCAAAGGAAAGTCGAAGGTTTGGTTCTTTTTGTTATGAATCACCACGGCTTGATAACCCACATCCTTCAGATTCTTTTAGTTTTAACATCTCTGGCCTGCAGAATCAGTACTTTTCTCCACGAATGAAGTCATCTGTTGGTTTCGTGACTCCACCTCACGTGAAGGGAATTGAATCATGCTCCGAATCTCTTGAATCAATATTGAGAAAGGCAGCTAAAACCTTCCCAACTCCTTCAATAATAAGGAAGAGAAGAAATGGAAGTGAATTACCTCCCACTCCTAGAAAGCTTGCAAATGCAGTTACTTCACATGTTTGTAATGAAGAAGTGAGAACAAATGATGTTTCTTCTTCTGAAGCTGTGAGGTTACCTGTCAGTCCAGCTAACCATGGCCATGGGAGTAATATTCTCCACAATAAGGCTTTCAACATGACTCCTCTATACCGAATAAGATCCAAGCAAACAGCTATTAAGTCTTTGAAGAAACAACTTGATTCTGCATTTCACATGGAGGAGAAACTTGCTAGTGAGATGGAAAAATCTACAAAGAGTGTTGTGATAACTGAAGATTGTCTTCATAAACCAAAATTGGCAGAGACGTAG 1689 0.389 MTEEKAEQLCLKNKQTYAASSSSISDGSGSAIPTSSRKTGSALPSNRRTTGPVRRVKDGWTEKEDETLKNAVEVFNGKNWKKIAAFFPDKSEVQCLHRWKKVLNPELIKGHWTKEEDDKIVELVCIHGPSKWSFISKSLPGRIGKQCRERWCNHLCPDIKKDPWTLEEELALMKAHCIHGNKWAEIAKVLPGRTDNAIKNHWNGSLKKRKDFYLANGRLPPILKSSTEVTVKDTVTHSTTNTIHVCSNKGLDATVASSSKTTDIAKLDSSDKNQLESSGIVREVEYSSSLPPKKCADSDCVNCNRLFHEGLRCSNMESGSGDNFKIIKAPKFVNPGQNANPRIDHYLNNSDMNGDRSTRIFYSKESRRFGSFCYESPRLDNPHPSDSFSFNISGLQNQYFSPRMKSSVGFVTPPHVKGIESCSESLESILRKAAKTFPTPSIIRKRRNGSELPPTPRKLANAVTSHVCNEEVRTNDVSSSEAVRLPVSPANHGHGSNILHNKAFNMTPLYRIRSKQTAIKSLKKQLDSAFHMEEKLASEMEKSTKSVVITEDCLHKPKLAET* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0128 562 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 104 159 IPR017930 -
Pvu10g0128 562 ProSiteProfiles Myb-like domain profile. 104 155 IPR001005 -
Pvu10g0128 562 Pfam Myb-like DNA-binding domain 112 170 - -
Pvu10g0128 562 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 103 IPR017930 -
Pvu10g0128 562 SUPERFAMILY Homeodomain-like 106 202 IPR009057 -
Pvu10g0128 562 ProSiteProfiles Myb-like domain profile. 156 206 IPR001005 -
Pvu10g0128 562 CDD SANT 112 155 IPR001005 -
Pvu10g0128 562 Gene3D - 56 108 - -
Pvu10g0128 562 CDD SANT 60 103 IPR001005 -
Pvu10g0128 562 PANTHER MYB-RELATED PROTEIN B-LIKE 20 478 - -
Pvu10g0128 562 MobiDBLite consensus disorder prediction 15 48 - -
Pvu10g0128 562 PANTHER MYB PROTEIN-RELATED 20 478 - -
Pvu10g0128 562 Pfam Myb-like DNA-binding domain 59 103 IPR001005 -
Pvu10g0128 562 SUPERFAMILY Homeodomain-like 55 110 IPR009057 -
Pvu10g0128 562 SMART sant 108 157 IPR001005 -
Pvu10g0128 562 SMART sant 160 208 IPR001005 -
Pvu10g0128 562 SMART sant 56 105 IPR001005 -
Pvu10g0128 562 CDD SANT 163 203 IPR001005 -
Pvu10g0128 562 MobiDBLite consensus disorder prediction 15 62 - -
Pvu10g0128 562 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 160 210 IPR017930 -
Pvu10g0128 562 Gene3D - 162 227 - -
Pvu10g0128 562 Gene3D - 109 160 - -
Pvu10g0128 562 ProSiteProfiles Myb-like domain profile. 57 103 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0128 Pvu-Chr10 1922595 1927038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0128 3 552 MYB Transcription Factor Family AT3G09370 40.972 1.60e-117 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu10g0128 Myb_DNA-bind_6 5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0128 K09422 - gmx:100777236 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1047 8 11154605 11164689 Pvu10g0128 10 1922595 1927038 PCT