Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0117 ATGAGCATGATTTCTATTATCTGTTTCAATTTTCACATTATTTTTGTGATTGTTCTTGCAATTTTCGTACACATATCATCTCAGCTTGGTTCAAAGGTAGAAGTGCTTCCTGGGTTTGAAGGGCCTCTTCCTTTTGAACTCGAAACAGGGTATGTAGGATTAGGAGAAACAGATGATGACAAGCAAGTGTTTTACTACTTTATCAAGTCAGAGAATGATCCTGCAAAAGATCCTCTTATGCTTTGGCTCACTGGAGGCCCTGGTTGCTCTTCATTTTCTGGGCTTGCTTTTCAAATTGGTCCATTTGGATTCAAGAGAGAGGAGTATGATGGGAGAGTGCCAAATTTGTTCTTGAGGCCACAGTCATGGACCAAGGTATGTAGCATTGTTTTTGTAGATTTGCCTTTTGGAACAGGCTTCTCGTATACAACAAATGTGACTGCTTATAGGAAGGACTGGAAGTTAGTTCACCATACCCATCAATTTCTTAGGAAGTGGCTGATTGATCACCCAGAATTTCTTTCAAATGACTTTTACTTTGGAGCTGATTCATATTCTGGCATACCTGGCCCTGCCATTGTTCAAGAAATTTCAAAGGGAAATGAAATAGGTCTTCAACCACCAATAAATCTCCAGGGATATCTACTAGGGAACCCCATGACAACACGAAAAGAAAAAAATGACAAAATCCCATTTGCTCATGGAATGGGACTTATTTCTGATGAACTCTATGTGTCACTGAAGAGAAATTGCAAAGGAGAATATATAGATGTAGATTCTAGAAATGAATTGTGTTCAAGAGATCTCAACTACTATGATGAGTGCCTTTCAGGAATTAATGAATTCAACATTTTGGATCTCTATTGCAAAGATGATTCTACTAAGAATCATGATCAAGGTCCATGGAGAAGATCTCTGACTCAGAAATTTGAGTCCTCTCTCAATTCTCATCTCACAGAGTTAGACACAAGATGCCAAATATATGGTTTTTTCCTTGCCACTCAATGGGCCAATGATGAGAGTGTTCGCAAAGCACTGCACATTCGAGAGGGAACAAAAGGCAAATGGGAACGTTGTTGGACTGGTGATTTTGAGTTTGAGATCTCTAGCAGCTTCGAGTTTCATTTAAATCTCAGTGCTAAAGGATATCGTTCTCTAATATATAGTGGGGATCATGATGCAGTTGTTCCTTTCATGTCGACTCAAACATGGATCAGAGCTCTAAACTACTCCATTGTAGACGATTGGAGGCCATGGCTTCTTGAAGGCCAAGTTGCAGGATACACAAGAACATACTCTAATCAAATGACATTTGCAACTGTGAAGGGTTCAGGACACACAGCTCCTGAGTACAAACCTGATGAAGGTTACGCCATGTTCAGTAGATGGATAGCCAGAAAGCCTTTGTAA 1410 0.3979 MSMISIICFNFHIIFVIVLAIFVHISSQLGSKVEVLPGFEGPLPFELETGYVGLGETDDDKQVFYYFIKSENDPAKDPLMLWLTGGPGCSSFSGLAFQIGPFGFKREEYDGRVPNLFLRPQSWTKVCSIVFVDLPFGTGFSYTTNVTAYRKDWKLVHHTHQFLRKWLIDHPEFLSNDFYFGADSYSGIPGPAIVQEISKGNEIGLQPPINLQGYLLGNPMTTRKEKNDKIPFAHGMGLISDELYVSLKRNCKGEYIDVDSRNELCSRDLNYYDECLSGINEFNILDLYCKDDSTKNHDQGPWRRSLTQKFESSLNSHLTELDTRCQIYGFFLATQWANDESVRKALHIREGTKGKWERCWTGDFEFEISSSFEFHLNLSAKGYRSLIYSGDHDAVVPFMSTQTWIRALNYSIVDDWRPWLLEGQVAGYTRTYSNQMTFATVKGSGHTAPEYKPDEGYAMFSRWIARKPL* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0117 469 Gene3D alpha/beta hydrolase 36 468 IPR029058 -
Pvu10g0117 469 Pfam Serine carboxypeptidase 37 465 IPR001563 GO:0004185|GO:0006508
Pvu10g0117 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Pvu10g0117 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Pvu10g0117 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Pvu10g0117 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Pvu10g0117 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 465 IPR001563 GO:0004185|GO:0006508
Pvu10g0117 469 SUPERFAMILY alpha/beta-Hydrolases 36 468 IPR029058 -
Pvu10g0117 469 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 13 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0117 Pvu-Chr10 1743004 1749079 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0117 27 56 Calmodulin-binding Proteins AT2G22960 66.667 3.36e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0117 K16296 - gmx:100780069 805.053