Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu10g0106 | ATGGGTTCTTGTTGGAGCAGTAGGACGAAGGCTGTGAGCCCTTCAAGTGCAGGGTTCACTTCTAGAAGTGTGAGCAGAGAGGGCTATGACATCCATTCAAGTAGCAGGAACTCATCATCCTCCATGCCCATGACCCCTCGGAGCGAGGGTGAGATCTTACAATCTTCAAATTTGAAAAGCTACAGCTACAATGAGCTAAGAATAGCAACAAAACATTTCAGCCCAGACAATGTCTTAGGGGAAGGTGGATTTGGTTCAGTTTTTAAGGGTTGGATTGATGAGCATTCGCTTTCTGTTACCAAGCCGGGAATAGGCATGGTTGTTGCTGTGAAGAGACTTAACCAAGAGGGGTTCCAGGGTCACAAGGAATGGTTGGCTGAAATAAACTATCTTGGGCAACTGCAGCATCCTAATCTTGTCAAGTTGATAGGCTACTGCTTAGAGGATCAGCACCGGCTTCTAGTTTATGAGTATATGCCAAAGGGCAGTGTGGAGAATCATCTATTCAGGAGGGGGTCTCATTTTCAGCAGCTTTCTTGGACATTAAGATTGAAAATATCCCTTGGGGCTGCTAGGGGTCTTGCTTTTCTCCATAACACAGAAACTAAAGTCATATACCGAGACTTCAAGACTTCTAATATCCTGCTTGATACGAACTACAATGCCAAACTTTCTGATTTTGGGCTGGCCAGAGATGGACCAACTGGTGATAAGAGCCATGTTTCTACAAGGGTCATGGGAACACATGGATATGCAGCACCAGAGTATCTAGCAACAGGTCACCTTACTTCCAAGAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTGGAAATGTTATCAGGAAGGCGTGCCATAGACAAGAATAGGCCATCTGGAGAACAATGCTTGGTGGAATGGGCAAAACCTTACCTTGCTAACAAACGAAGGGTTTTTCGTGTAATGGATAGTCGTCTAGAAGGTCAGTATTCCCTTAACCGAGCTCAAAGAGCAGCCACCCTTGCTTTTCAGTGTCTTTCCGTAGAGCCCAAATACAGGCCAAACATGGATGAAGTGGTGAGAGTGTTGGAGCAAGTGCGTGAGTCAAATGATGAAGGCAAAAATGGTAATTGTAAAAAGCGTAGAGTGAGTGGCTCTGGCCTTGGCCATCCCAATGGACTACCTGCATCTGCTAGCACAGGAAGTTCTGATGCTCCAAAAAAGTTGGCTTATCCAAGACCTTCTGCATCTCTTCTTTATGTTTAA | 1242 | 0.4493 | MGSCWSSRTKAVSPSSAGFTSRSVSREGYDIHSSSRNSSSSMPMTPRSEGEILQSSNLKSYSYNELRIATKHFSPDNVLGEGGFGSVFKGWIDEHSLSVTKPGIGMVVAVKRLNQEGFQGHKEWLAEINYLGQLQHPNLVKLIGYCLEDQHRLLVYEYMPKGSVENHLFRRGSHFQQLSWTLRLKISLGAARGLAFLHNTETKVIYRDFKTSNILLDTNYNAKLSDFGLARDGPTGDKSHVSTRVMGTHGYAAPEYLATGHLTSKSDVYSFGVVLLEMLSGRRAIDKNRPSGEQCLVEWAKPYLANKRRVFRVMDSRLEGQYSLNRAQRAATLAFQCLSVEPKYRPNMDEVVRVLEQVRESNDEGKNGNCKKRRVSGSGLGHPNGLPASASTGSSDAPKKLAYPRPSASLLYV* | 414 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu10g0106 | 413 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Pvu10g0106 | 413 | Gene3D | Transferase(Phosphotransferase) domain 1 | 159 | 378 | - | - | |
Pvu10g0106 | 413 | PANTHER | KINASE 1B | 22 | 392 | - | - | |
Pvu10g0106 | 413 | Gene3D | Phosphorylase Kinase; domain 1 | 48 | 158 | - | - | |
Pvu10g0106 | 413 | ProSiteProfiles | Protein kinase domain profile. | 73 | 358 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu10g0106 | 413 | MobiDBLite | consensus disorder prediction | 360 | 413 | - | - | |
Pvu10g0106 | 413 | ProSitePatterns | Protein kinases ATP-binding region signature. | 79 | 111 | IPR017441 | GO:0005524 | |
Pvu10g0106 | 413 | PANTHER | OS01G0588500 PROTEIN-RELATED | 22 | 392 | - | - | |
Pvu10g0106 | 413 | CDD | STKc_IRAK | 79 | 357 | - | - | |
Pvu10g0106 | 413 | Pfam | Protein kinase domain | 76 | 352 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu10g0106 | 413 | SUPERFAMILY | Protein kinase-like (PK-like) | 38 | 355 | IPR011009 | - | |
Pvu10g0106 | 413 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 204 | 216 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu10g0106 | Pvu-Chr10 | 1603054 | 1606426 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu10g0106 | 34 | 355 | Glycoside Hydrolase | AT3G07070 | 46.547 | 1.16e-100 | 304 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Pvu10g0106 | Pkinase | 9e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu10g0106 | - | - | gmx:100795058 | 743.421 |