Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0106 ATGGGTTCTTGTTGGAGCAGTAGGACGAAGGCTGTGAGCCCTTCAAGTGCAGGGTTCACTTCTAGAAGTGTGAGCAGAGAGGGCTATGACATCCATTCAAGTAGCAGGAACTCATCATCCTCCATGCCCATGACCCCTCGGAGCGAGGGTGAGATCTTACAATCTTCAAATTTGAAAAGCTACAGCTACAATGAGCTAAGAATAGCAACAAAACATTTCAGCCCAGACAATGTCTTAGGGGAAGGTGGATTTGGTTCAGTTTTTAAGGGTTGGATTGATGAGCATTCGCTTTCTGTTACCAAGCCGGGAATAGGCATGGTTGTTGCTGTGAAGAGACTTAACCAAGAGGGGTTCCAGGGTCACAAGGAATGGTTGGCTGAAATAAACTATCTTGGGCAACTGCAGCATCCTAATCTTGTCAAGTTGATAGGCTACTGCTTAGAGGATCAGCACCGGCTTCTAGTTTATGAGTATATGCCAAAGGGCAGTGTGGAGAATCATCTATTCAGGAGGGGGTCTCATTTTCAGCAGCTTTCTTGGACATTAAGATTGAAAATATCCCTTGGGGCTGCTAGGGGTCTTGCTTTTCTCCATAACACAGAAACTAAAGTCATATACCGAGACTTCAAGACTTCTAATATCCTGCTTGATACGAACTACAATGCCAAACTTTCTGATTTTGGGCTGGCCAGAGATGGACCAACTGGTGATAAGAGCCATGTTTCTACAAGGGTCATGGGAACACATGGATATGCAGCACCAGAGTATCTAGCAACAGGTCACCTTACTTCCAAGAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTGGAAATGTTATCAGGAAGGCGTGCCATAGACAAGAATAGGCCATCTGGAGAACAATGCTTGGTGGAATGGGCAAAACCTTACCTTGCTAACAAACGAAGGGTTTTTCGTGTAATGGATAGTCGTCTAGAAGGTCAGTATTCCCTTAACCGAGCTCAAAGAGCAGCCACCCTTGCTTTTCAGTGTCTTTCCGTAGAGCCCAAATACAGGCCAAACATGGATGAAGTGGTGAGAGTGTTGGAGCAAGTGCGTGAGTCAAATGATGAAGGCAAAAATGGTAATTGTAAAAAGCGTAGAGTGAGTGGCTCTGGCCTTGGCCATCCCAATGGACTACCTGCATCTGCTAGCACAGGAAGTTCTGATGCTCCAAAAAAGTTGGCTTATCCAAGACCTTCTGCATCTCTTCTTTATGTTTAA 1242 0.4493 MGSCWSSRTKAVSPSSAGFTSRSVSREGYDIHSSSRNSSSSMPMTPRSEGEILQSSNLKSYSYNELRIATKHFSPDNVLGEGGFGSVFKGWIDEHSLSVTKPGIGMVVAVKRLNQEGFQGHKEWLAEINYLGQLQHPNLVKLIGYCLEDQHRLLVYEYMPKGSVENHLFRRGSHFQQLSWTLRLKISLGAARGLAFLHNTETKVIYRDFKTSNILLDTNYNAKLSDFGLARDGPTGDKSHVSTRVMGTHGYAAPEYLATGHLTSKSDVYSFGVVLLEMLSGRRAIDKNRPSGEQCLVEWAKPYLANKRRVFRVMDSRLEGQYSLNRAQRAATLAFQCLSVEPKYRPNMDEVVRVLEQVRESNDEGKNGNCKKRRVSGSGLGHPNGLPASASTGSSDAPKKLAYPRPSASLLYV* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0106 413 MobiDBLite consensus disorder prediction 1 52 - -
Pvu10g0106 413 Gene3D Transferase(Phosphotransferase) domain 1 159 378 - -
Pvu10g0106 413 PANTHER KINASE 1B 22 392 - -
Pvu10g0106 413 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Pvu10g0106 413 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0106 413 MobiDBLite consensus disorder prediction 360 413 - -
Pvu10g0106 413 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Pvu10g0106 413 PANTHER OS01G0588500 PROTEIN-RELATED 22 392 - -
Pvu10g0106 413 CDD STKc_IRAK 79 357 - -
Pvu10g0106 413 Pfam Protein kinase domain 76 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g0106 413 SUPERFAMILY Protein kinase-like (PK-like) 38 355 IPR011009 -
Pvu10g0106 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0106 Pvu-Chr10 1603054 1606426 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0106 34 355 Glycoside Hydrolase AT3G07070 46.547 1.16e-100 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu10g0106 Pkinase 9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0106 - - gmx:100795058 743.421