Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0102 ATGAAGGAAAGGCAACGTTGGAAGGCTGAAGAGGATGCATTGTTATGTGCTTATGTTAGAGAGTATGGTCCTAGGGAATGGAACCTTGTGTCTCAGCGCATGAACACAACTCTGAACAGGGATGCAAAGTCATGCTTAGAAAGGTGGAAGAACTACCTGAAGCCTGGCATCAAGAAGGGGTCTCTAACGGAGGAAGAGCAGCACCATGTGATCCGGCTTCAAGCGAAACACGGCAACAAGTGGAAGAAAATTGCTGCAGAAGTTCCTGGTAGAACTGCCAAGAGGTTAGGGAAGTGGTGGGAAGTGTTCAAGGAGAAGCAACAAAGGGAGAAACAAGAGATTAACAAAGCAATTGGTCCAGTTGATAACACCAAATATGATCACATTCTTGAGACTTTTGCTGAGAAGCTAGTGAAAGAACACCCTTCACAATCATCATACCTTATGGCTGCTTCTACTGGACCATTTATCCATACTGATGCACATGCAACTGTTCCTGCACCTGCACCTGCATCTGCAGCAGCAGCATTGCTTCCTCCTTGGCTTTCAAATTCTAGCACCACCAATCCCTCACCAGCAATTATGCCACCTTCCCCTTCTGTGACCCTCAGTCTCTCATCAACTGCACCTCCTCCCCCTTGGTTGAATGTAACAACACCTCATGGTGATGGCATAGTAGTTTCAGAGTTAATAGACTGCTGCAAGGAGTTGGAAGAAGGGCATCATGCTATGGTGGTGCACAGGAAGGAGGCAGCATGGCTGTTAAGAAGGGTGGAGCTGCAGTTGGAGGCAGAGAAGGGAAACAGAAGGAGGGAAAAGATGGAGGAAATTGAAGCAAAGATTAAGGCTCTGGGGGAAGAAAAGAATGCTGCTTTGGATAGGATAGAAGCAGAATATAGAGAACAGTTAGCAGGGTTGAGAAGAGATGCAGAAAGCAAGGAGAAGAAGTTGGTTGAGGAATGGAATGCAAAGCACATGAGGGTAGTGAAGTGTATGGAACAAGTAGGATGCAGAATATCCAGAATTGCTGAGCCTAATGGAAGATAA 1047 0.4623 MKERQRWKAEEDALLCAYVREYGPREWNLVSQRMNTTLNRDAKSCLERWKNYLKPGIKKGSLTEEEQHHVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKQEINKAIGPVDNTKYDHILETFAEKLVKEHPSQSSYLMAASTGPFIHTDAHATVPAPAPASAAAALLPPWLSNSSTTNPSPAIMPPSPSVTLSLSSTAPPPPWLNVTTPHGDGIVVSELIDCCKELEEGHHAMVVHRKEAAWLLRRVELQLEAEKGNRRREKMEEIEAKIKALGEEKNAALDRIEAEYREQLAGLRRDAESKEKKLVEEWNAKHMRVVKCMEQVGCRISRIAEPNGR* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0102 348 Pfam Myb-like DNA-binding domain 7 69 - -
Pvu10g0102 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 108 IPR017930 -
Pvu10g0102 348 CDD SANT 6 53 IPR001005 -
Pvu10g0102 348 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Pvu10g0102 348 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 348 - -
Pvu10g0102 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 57 IPR017930 -
Pvu10g0102 348 PANTHER TRANSCRIPTION FACTOR AS1 1 348 IPR031055 GO:0005634|GO:0006351|GO:0010338
Pvu10g0102 348 Gene3D - 4 58 - -
Pvu10g0102 348 Coils Coil 255 294 - -
Pvu10g0102 348 CDD SANT 63 104 IPR001005 -
Pvu10g0102 348 Gene3D - 62 122 - -
Pvu10g0102 348 SMART sant 58 106 IPR001005 -
Pvu10g0102 348 SMART sant 3 55 IPR001005 -
Pvu10g0102 348 SUPERFAMILY Homeodomain-like 4 98 IPR009057 -
Pvu10g0102 348 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Pvu10g0102 348 Coils Coil 296 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0102 Pvu-Chr10 1540083 1543180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0102 1 341 MYB Transcription Factor Family AT2G37630 58.667 4.47e-141 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu10g0102 Myb_DNA-bind_6 8.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0102 K09422 - zju:107430642 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0102 10 1540083 1543180 Pvu8g1050 8 11200884 11204015 PCT