Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0090 ATGTCTTTCTCTGATGGTGATGATGAGATGGAGATGGACTTTCTTCGTGATCGGTACGAGGACAGCAGAAACTATGAAGTGTTCTTGAGTTTCAGAGGGGAAGACACGCGTGCTTCTTTCACTTCCCATCTCTATGCTGCTCTTCAGAATGCCGGAATCTTTGTTTTCAAGGATGACGAGTCACTTCCCCGGGGAAGGCAAATTTCACCCTCTCTGAGGCTGGCGATCGAACAGTCTCGAATTTCTGTTGTTGTTTTCTCCAAAAATTATGCAGAGTCGTGGTGGTGTTTGAAAGAGTTGGAGAAAATAATGGAGTGTCACAGAACCATAGGGCATGTGGTGCTACCAGTGTTCTATCACGTTGATCCCTCTGAAGTACGTCATCAAAGAGGGGACTTCGGGGAAGCATTTCGACGCCTTTCGAGCAAGATTTCGAATGAGATTGAGGAGAAGGTGCTGGATTGGAAGCAGCGGTGGAGGACCGTACTTGGTGAGACTATTGAGGAAAAGGTGCTGGATTGGAAGCAGTCCTGGAGGACCGCACTTGGTGAGACTAATGGCTTCTATTCGAGGATTGAAGAGTTAGAAAACATCGTGCTGAAGAATTGGAAAGAGGAACTTGCTGAGGCTGCTCAGATCTCAGGGGTTGTAGACGTAGATCCAACGGGGAAAATGAAGATTGCTGATGAGATAGACTCGCTCGTGATGCACTGGATGAACGGACTTCGTACGGGTGTTGAAATCCCGATTAGAGAAATGAAGACTGAAGATAGGACAGACTTCCTCTTGAAGCAATGGAGGGAGGTATTTTGTGAGCCAGTTAGCATCTCAGAGGTTGCATTCTTAGATCCACGAGCGGAGATCGCTAATGTGATAGATTTCCACGTGAAGCATTGTAGGGAGGCACTTTTTGAGGCTGCTGGCATCTCTGGGGGCGCAGTCTTGAATTCCTGGTGGGAGATATTGGACCTCATGAATCATTGGAGGGATAAACTTTTTGAGGCTTCTGGTATTTCAGGGGATAATAAACAACTCTCTTCCAGAGAAATTGAGATAGAAGAGTTGTTGGAGTCTTGGAGGCAGGAACTATATGACGCTCTTCAAAACTCAATAGGTGCTGTTGACAACTCAGCAGGTTCTGTTGACAACTCAGCAGGTGCTGTTGACAACTCAGCAGGTGCTGTTGACAACTCAACAGGTGCAGTCTTTGAATCCAGAAGTTTAAAAAAGCTGAAGGCTTATAATCGTATAGAGAGCCTTCTGAATCATTGGAGGATGGCACTCTGTGAGGCTGTTGCCATCTCGAGGTTGGTAGCCCAGCATTACAGAGGAATAAAGGATAACGAGATCAACTACCTTGTGAAGCATGCTGGTGACACACTTTGTGAGGCTGCTGGCATTTCAGGGGTTGTAATCCTGAATTCTGGGAATGAAAGCGAGGCTGTGAAAAATATTGTTAAAAATGTTACAAGTTTGTTGGACAAGACAGAGTTGTTTGTTGCCAATAATCCAGTCGGAGTAGAATCTCGAGTGCAAGAAATGGTTCAATTGCTAGAACAAAAACAATCAAACGATGTTCTACTACTTGGGGTATGGGGGATGGGAGGAATTGGTAAAACAACCATTGCAAAAGCAATTTACAATAAGATTGGCCGCAATTTTGAGGCAAGGAGTTTCCTTGCAGATATTAGGGAAGTTTGGGGGCAAGAAGCTGGCCACGTTTGTTTACAAGAACAACTTCTATTTGATATCCACAAAGAAAACAATACAAAGATACATAACATTGAATCAGGAAAAATTATATTAAGAGAAAGACTTCGCCATAAAAGGATACTTCTTATACTTGATGACGTAAATAAATTACAGCAATTAAATGTTTTGTGTGGAAATCGTGAATGGTTTGGTTCAGGGAGTAGAATAATCATCACAACCAGAGACGTACATTTACTTAGAGGGAAAAGAGTTGACCAAGTGTTCAGTATGAAAGGAATGGATGTAGATGAATCTATTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGCAAGTCCCAAAGAAGATTTTATTGAACTTTCAAGAAATGTAGTTGCTTATTCTGGGGGATTGCCACTAGCTCTTGAAGTCCTTGGGTCTTATTTGTTTGATATGGAGGTAACAGAGTGGAAGATTGTATTGGAAAAACTCAGGAAAATTCCTAATGATGAAGTACAGGAGAAGTTAAAAATAAGCTATGATGGTTTAAGTGATGATACAGAGAAAGGAATATTCCTTGATATTGCATGTTTCTTTATAGGGAAGGATCGAAATGATGTTATACATATATTGAATGGTTGTGAACTTTTCCCAGAAAATGGAATTCGTGTCTTGGTAGAGCGAAGCCTTGTAACTGTAGATGATAAGAACCAACTTGGAATGCATGATTTGCTACGAGACATGGGAAGGGAAATTATTCGTTCAAAATCACCAATGGAGCTTGAGGAGCGTAGCAGGTTATGGTTTCACGACGATGTGCTTGATGTGTTATCAAAAGAAACTGGAACAAAGTTTATTGAGGGATTGACTTTGAAGTTACCAATAAGTAATACAAAATCTCTAAGAACTAAAGCTTTTATGAACATGAAGAAACTCAGGTTGCTGCAACTTTCTGGTGTAGAACTTGTTGGAGATTTTGAATATCTTTCCAAAGACCTTAGATGGCTTTGTTGGCATGGATTTCCTCTAGCCTTCATGCCAAAAAGCTTTTATCAAGGAAATATAGTCTCTATTGAGTTAGAAAACAGTAAGATTACAATGATGTGGAAGGAGGCTCAGCTGATGGAGAAGTTAAAAATTCTCAATCTTAGCCATTCTCATTATTTAACAAAGACTCCAGACTTTCTGAATTTGCCTAATCTTGAAAAGCTGGTACTCATGGACTGTCCAAGGCTGTCTGAAGTTTCATATACCATTGGTAATCTCACCAAAGTTCTACTAATAAATTTTCAAGATTGTATTGGCCTTCGTAACCTTCCAAGAAGTATCTATAAGTTGAAATCTCTTAAAACACTCATTCTCTCTGGATGTTTAAAGATTGACGAGTTGGAAGAGAGCTTAGAACAGATGGAGTCTTTGACAACCCTTATTGCAGATAAGACTGGTATTACAAGGGTGCCCTTTTCAGTAGTTAGATCAAAAAGTATTGGATATATTTCATTATGTGGTTATGAAGGATTCTCACGCGATGTATTTTCCTCTATCATTTGGTCTTGGATGTCACCAGTAAATAGTCTCTCTTCCCGTGTTCAAACATTCGTGGACATGTCTTCTCTTGTTTCTTTAGATGTACAAAAAAGCAGTTCCAATCAGCTATCATATCTCTCTGAGGAGCTTCCAAAGCTTCAAAGTCTTTGGATTGAGTGTGGCTCAGACCTTCAACTTTCTCGAGATACATCAAGTATTTTGGATGCTTTATATGCGACAAATTCTGAAGAATCGGAGTCATCTGGAACCACATCACAAATGCAGAATGTATTTACATTAATTGAATGCAACTCAAGTTCAAAACGTTTTGAGAAAACACTTTTAATTCAAATGGGAACAAGTTGGGAAATCACACATATTCTGAAACAGAGAATTTTACAGAATATGACTACAAGTGAGGGCGGTGATTGTTTGCTCCCTGGCAATTGTTATCCAGATTGGTTAACCTTCAGCAGCAAAGGTTCTTCTGTGACTTTTGAAATCCCTCGAGTGAATGGGCGTAACTTGAAGACAATGATGTGTCATACCCATTATTCTTCCTCTGAAAATATAACTTCAGATGGGCTAAAAAATTTGTTGGTGATAAATCACACAAAGACCACCATTCAGCTTTACAAGAGAAATGCATTAGCGTCGTTTGAAGATGAGGAGTGGCAGAGGGTACTATCAAACATTGAGCCTGGAAACAAGGTGCAAATTGTTGTTGTTTTCTGGAGCGGATTAACTGTTAACAAGACCACAATTTATCTTATATATGAGGGAATTGATGAAAAAGACCATGCACCAAATCTGAATGTTCCCAGTGATGAATCTTCTCCTCGAGTGGAATCCATGGAGGACTTGAGGGGTGTTTCCGTTAAAAGCTTAACTAAAAGCTTATTGAATAAACTCTCATCATGTACATACTGTTGTAAATTAAAATTGGAAAAGAAAAATAAAGGTTAA 4182 0.4003 MSFSDGDDEMEMDFLRDRYEDSRNYEVFLSFRGEDTRASFTSHLYAALQNAGIFVFKDDESLPRGRQISPSLRLAIEQSRISVVVFSKNYAESWWCLKELEKIMECHRTIGHVVLPVFYHVDPSEVRHQRGDFGEAFRRLSSKISNEIEEKVLDWKQRWRTVLGETIEEKVLDWKQSWRTALGETNGFYSRIEELENIVLKNWKEELAEAAQISGVVDVDPTGKMKIADEIDSLVMHWMNGLRTGVEIPIREMKTEDRTDFLLKQWREVFCEPVSISEVAFLDPRAEIANVIDFHVKHCREALFEAAGISGGAVLNSWWEILDLMNHWRDKLFEASGISGDNKQLSSREIEIEELLESWRQELYDALQNSIGAVDNSAGSVDNSAGAVDNSAGAVDNSTGAVFESRSLKKLKAYNRIESLLNHWRMALCEAVAISRLVAQHYRGIKDNEINYLVKHAGDTLCEAAGISGVVILNSGNESEAVKNIVKNVTSLLDKTELFVANNPVGVESRVQEMVQLLEQKQSNDVLLLGVWGMGGIGKTTIAKAIYNKIGRNFEARSFLADIREVWGQEAGHVCLQEQLLFDIHKENNTKIHNIESGKIILRERLRHKRILLILDDVNKLQQLNVLCGNREWFGSGSRIIITTRDVHLLRGKRVDQVFSMKGMDVDESIELFSWHAFKQASPKEDFIELSRNVVAYSGGLPLALEVLGSYLFDMEVTEWKIVLEKLRKIPNDEVQEKLKISYDGLSDDTEKGIFLDIACFFIGKDRNDVIHILNGCELFPENGIRVLVERSLVTVDDKNQLGMHDLLRDMGREIIRSKSPMELEERSRLWFHDDVLDVLSKETGTKFIEGLTLKLPISNTKSLRTKAFMNMKKLRLLQLSGVELVGDFEYLSKDLRWLCWHGFPLAFMPKSFYQGNIVSIELENSKITMMWKEAQLMEKLKILNLSHSHYLTKTPDFLNLPNLEKLVLMDCPRLSEVSYTIGNLTKVLLINFQDCIGLRNLPRSIYKLKSLKTLILSGCLKIDELEESLEQMESLTTLIADKTGITRVPFSVVRSKSIGYISLCGYEGFSRDVFSSIIWSWMSPVNSLSSRVQTFVDMSSLVSLDVQKSSSNQLSYLSEELPKLQSLWIECGSDLQLSRDTSSILDALYATNSEESESSGTTSQMQNVFTLIECNSSSKRFEKTLLIQMGTSWEITHILKQRILQNMTTSEGGDCLLPGNCYPDWLTFSSKGSSVTFEIPRVNGRNLKTMMCHTHYSSSENITSDGLKNLLVINHTKTTIQLYKRNALASFEDEEWQRVLSNIEPGNKVQIVVVFWSGLTVNKTTIYLIYEGIDEKDHAPNLNVPSDESSPRVESMEDLRGVSVKSLTKSLLNKLSSCTYCCKLKLEKKNKG* 1394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0090 1393 Pfam NB-ARC domain 508 735 IPR002182 GO:0043531
Pvu10g0090 1393 Gene3D Ribonuclease Inhibitor 846 1001 IPR032675 -
Pvu10g0090 1393 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 492 758 IPR027417 -
Pvu10g0090 1393 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 32 1329 - -
Pvu10g0090 1393 SMART AAA_5 525 665 IPR003593 -
Pvu10g0090 1393 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 165 IPR035897 -
Pvu10g0090 1393 Pfam TIR domain 24 165 IPR000157 GO:0007165
Pvu10g0090 1393 SUPERFAMILY "Winged helix" DNA-binding domain 733 840 IPR036390 -
Pvu10g0090 1393 Coils Coil 342 362 - -
Pvu10g0090 1393 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 32 1329 IPR044974 GO:0006952
Pvu10g0090 1393 Gene3D - 19 243 IPR035897 -
Pvu10g0090 1393 SUPERFAMILY L domain-like 853 1133 - -
Pvu10g0090 1393 Gene3D Ribonuclease Inhibitor 1002 1150 IPR032675 -
Pvu10g0090 1393 Gene3D - 485 657 IPR027417 -
Pvu10g0090 1393 ProSiteProfiles TIR domain profile. 23 182 IPR000157 GO:0007165
Pvu10g0090 1393 Gene3D - 664 747 IPR042197 -
Pvu10g0090 1393 SMART till_3 24 170 IPR000157 GO:0007165
Pvu10g0090 1393 PRINTS Disease resistance protein signature 528 543 - -
Pvu10g0090 1393 PRINTS Disease resistance protein signature 605 619 - -
Pvu10g0090 1393 PRINTS Disease resistance protein signature 698 712 - -
Pvu10g0090 1393 PRINTS Disease resistance protein signature 1007 1023 - -
Pvu10g0090 1393 CDD AAA 505 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0090 Pvu-Chr10 1305804 1317609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0090 729 820 WRKY Transcription Factor Family AT5G45050 34.409 4.62e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0090 - - pvu:PHAVU_010G008700g 2745.3