Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0055 ATGCCTTCCTCTTCCACCACCATAGTCTCAAGATGCCTCATCCATCCCGACCACAAATCCACCCTCAAACCACTCAAACTCTCTGTTTCTGACCTTCCAATGTTGTCCTGTCATTACATCCAAAAGGGGGTCTTGCTCACTGCCCCACCCTCTTCCTTCGAAAACCTCATTCTCTCTCTCAAACACTCTCTCTCCGCCGCTCTCTCCCACTTCCCCCCCATCGCCGGCCGTTTCTCCACCGACTCCCAGGGTTACGTCCACATCGTCTGCAACGACGCCGGCGTCGACTTCATCCACGCCAAGGCCAAGCACTTAACTCTCAACGCCGTCGTTTCCCCCATGTCCGTTGATGTTCACCCGTGCTTCAAGGAATTCTTCGCCTACGACATGATGATCTCCTACGCCGGCCACCACAACCCCCTCGCGGCTGTCCAGGTCACCGAGCTTGCCGACGCCGTTTTCGTCGGCTGCACCGTCAACCACGCCGTCACCGACGGAACCTCCTTCTGGCACTTCTTCAACACCTTTGCCGCCATCACCAAAGGCAGCGCCGCCAAGAAAGTACTCCGCGCGCCGGATTTCACGCGCGAAACCGTAATCAACTCCCCTGCCGTCCTCTTCGTCCCCGCCGGCGGCCCCGCCCTCACTTTTGACGCCAACAAACCCATCCGCGAACGCGTCTTCCACTTCTCCCGCGAATCCATTCAGAAACTCAAACTTAGAGCCAACGCCAATACCAACGAACTAACGGAAGTAATGGGAAAACAAGTGAATGACGGTTGGAAAATCGTTAACGGTAACGGAAATGCAAACGGAAACGGAAAGCTTAACGGTAACGAAAGAAACGAGATCTCGTCGTTTCAGTCGTTATCTGCTCAGCTCTGGCGTGCGGTGACACGTGCGAGGAAATTCAACGACCCTGCCAAAACGTCAACGTTTCGGATGGCGGTTAATTTCCGCCACCGCTTGGAGCCGAAGATGGACGCGTTTTACTTCGGCAATGCGATTCAGAGCATACCAACCGTCGCAACCGTCGGGGATATTCTCTCGCGCGATCTGTGTTTCTGCGCGGATTTCCTGCATCGGAACGTGATCGCGCACGATGACGCTACGGTGCGCCGCGGCATAGAGGATTGGGAGAACGCGCCGCGGCTGTTTCCTCTCGGGAACTTCGACGGCGCGATGATCACCATGGGAAGCTCCCCGCGTTTTCCCATGTACGACAACGACTTCGGCTGGGGCAGGCCCGTCGCGATTCGGAGCGGCAAAGCGAACAAGTTCGACGGTAAAATCTCCGCTTTTCCGGGGAGAGAAGGAAACGGCAGCGTGGATCTGGAAGTCGTTTTGGCTCCGGAGACCATGGCGGGGCTCGAAAACGACATGGAGTTTATGCAATACGTAACGCAGGTGGTGTGA 1416 0.5629 MPSSSTTIVSRCLIHPDHKSTLKPLKLSVSDLPMLSCHYIQKGVLLTAPPSSFENLILSLKHSLSAALSHFPPIAGRFSTDSQGYVHIVCNDAGVDFIHAKAKHLTLNAVVSPMSVDVHPCFKEFFAYDMMISYAGHHNPLAAVQVTELADAVFVGCTVNHAVTDGTSFWHFFNTFAAITKGSAAKKVLRAPDFTRETVINSPAVLFVPAGGPALTFDANKPIRERVFHFSRESIQKLKLRANANTNELTEVMGKQVNDGWKIVNGNGNANGNGKLNGNERNEISSFQSLSAQLWRAVTRARKFNDPAKTSTFRMAVNFRHRLEPKMDAFYFGNAIQSIPTVATVGDILSRDLCFCADFLHRNVIAHDDATVRRGIEDWENAPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGRPVAIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPETMAGLENDMEFMQYVTQVV* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0055 471 SUPERFAMILY CoA-dependent acyltransferases 60 185 - -
Pvu10g0055 471 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 5 468 - -
Pvu10g0055 471 Pfam Transferase family 7 464 - -
Pvu10g0055 471 Gene3D - 221 464 IPR023213 -
Pvu10g0055 471 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 5 468 - -
Pvu10g0055 471 Gene3D - 6 207 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0055 Pvu-Chr10 889493 890908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0055 60 459 Monolignol Biosynthesis Gene Families AT5G48930 26.540 1.18e-33 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0055 - - gmx:100804321 830.476