Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0023 ATGGCCACCGCAACGGCAACAGCAGCGGCCACGTCCTCCTTCATGGGGACGCGCCTCCTGGAAGCGCATTCTGGGTCGGGGCGGGTCCAGGCCCGATTCGGGTTCGGGCCGAAGAAGAAGGCCGCGCCCAAGAAGGTGTCGAAGGGCTCGGGCACCGAGAGGCCGTTGTGGTACCCCGGCGCGAAGTCACCAGAATGGCTTGACGGGAGCCTTATCGGGGACTACGGGTTCGACCCGTTTGGGCTCGGAAAGCCCGCGGAGTATTTGCAGTTTGAGCTGGACTCGCTGGACCAGAACCTGGCTAAGAATGAGGCCGGGCTCATCATCGGCACCAGAACCGAGGTTGCAGACGTGAAGTCCACTCCCTTCCAGCCCTACAGCGAGGTCTTCGGCCTCCAGAGGTTCCGCGAGTGCGAGCTCATCCACGGACGCTGGGCCATGCTCGCCACCCTCGGAGCCCTCACCGTCGAGTGGCTCACCGGTGTCACATGGCAGGACGCCGGCAAGGTGGAGCTAGTAGAAGGATCATCGTACCTTGGACAACCACTTCCATTCTCAATCACCACATTGATCTGGATCGAGGTTCTGGTAATTGGGTTCATTGAGTTCCAGAGGAACGCAGAGCTTGACCCAGAAAAGAGGTTGTACCCTGGTGGCAGCTACTTCGACCCTCTTGGTTTGGCCTCAGACCCAGAGAAGAAAGCCACTCTTCAATTGGCAGAGATCAAGCACGCACGTCTTGCCATGGTGGGCTTCTTGGGCTTTGCAGTCCAAGCTGCTGCCACTGGCAAGGGCCCACTCAACAACTGGGCTACCCACTTGAGTGACCCACTCCACACAACCATCATTGACACCTTCTCATCCTCTTAA 870 0.5931 MATATATAAATSSFMGTRLLEAHSGSGRVQARFGFGPKKKAAPKKVSKGSGTERPLWYPGAKSPEWLDGSLIGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNEAGLIIGTRTEVADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGFIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0023 289 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 4 289 - -
Pvu10g0023 289 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 289 IPR001344 GO:0009765|GO:0016020
Pvu10g0023 289 SUPERFAMILY Chlorophyll a-b binding protein 52 287 - -
Pvu10g0023 289 Gene3D Chlorophyll a/b binding protein domain 57 289 - -
Pvu10g0023 289 Pfam Chlorophyll A-B binding protein 64 259 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0023 Pvu-Chr10 550578 552238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0023 14 289 Chloroplast and Mitochondria Gene Families AT3G08940 85.199 4.39e-173 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0023 K08915 - gmx:100785180 542.732