Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0016 ATGGAGGTGATGGAGAATGGTGGTGCAAACTTGAAGGGGTTGAGCAAGGAGATGAGACATGGAAGAACAGCACATAACATGTCATCTTCTTCATTGCGCAAGAAATCTGACCTAACTCTTGTGTCTAAGGTTAGTTCTGGTCCTCTGAAAAATCTGCTGCTGAACATCCAAGAGGTTATTTTGGGAACCAAACTTTCCATTCTCTTCCCTGCTGTTCCCATTGCCATTGTTGCTCAATGCTATGGATTTGCAAAACCTTGGATTTTTGCTTTGAGTTTACTGGGGCTTACCCCACTTGCTGAAAGACTCAGTTTTTTGACAGAACAGATTGCTTTTTACACTGGTCCCACAGTGGGAGGACTTATGAATGCAACATGTGGGAATGCTACAGAGCTCATTATAGCAATTTTTGCCCTTAGCCATAACAACATTGCTTTGGTCAAATATTCTCTTCTGGGTTCTATAATTTCTAACCTTCTTTTGGTTCTTGGAACCTCTCTAATCTGTGGAGGCCTTGTAAACCTTAGGCAGGAACAGAAATATGATAGAAGACAGGTAGATATGAACTTGCTTATGCTATTTGTGGCATTGCATTGCCACTTGCTGCCAATGCTGTTCCATTATGCTGGTGCCTCAGAAGGTGTTGCTGCAGAATCATCTCTGCAGTTGTCAAGGGCTGCTAGTGTTATTATGGTGATAGCATATTTTGCCTACCTTGTGTTCCAGCTGTGGACTCACAGACAACTCTTTGAAGACCCGGTTGAAAATGAAGAAGAGGGTGACAATGATTCAGATGAAGCAGTGATAGGATTCTGGAGTGGGTGTGTTTGGCTGGTTGGGATGACTGTGATCATTGCAGTGCTGTCTGAATATGTGGTGCAAACAATTGAGGATGCATCTAATTCATGGGGTTTGTCTGTTAGCTTCCTCAGCATAATCTTGCTTCCAATAGTTGGAAATGCAGCTGAACACGCTGGAGCAATCATATTTGCTTTCAAGAACAAACTGGACATCTCCTTGGGTGTTTGTTTGGGTTCTGCAACTCAAATTAGCATGTTTGTGGTTCCCCTTTGTGTGATTGTTGCTTGGATTCTGGGAATAGAAATGGACCTGAAGTTCAACCTCCTAGAATCTGGTTCTCTTACTTTGGCAATAATAACCACAGCCTTCACATTACAGGATGGAACTTCTCACTACATGAAAGGCCTTGTGCTCTTCCTGTGCTACATTGTTATTGGGGCATGCTTTTTCGTACAAAAAACACCCTCCAACAAAAACAATGCTTCTAACATAGTTCTTAAATCAGCAAGGGGAGCAGTTTTTGGAACTTAA 1332 0.4234 MEVMENGGANLKGLSKEMRHGRTAHNMSSSSLRKKSDLTLVSKVSSGPLKNLLLNIQEVILGTKLSILFPAVPIAIVAQCYGFAKPWIFALSLLGLTPLAERLSFLTEQIAFYTGPTVGGLMNATCGNATELIIAIFALSHNNIALVKYSLLGSIISNLLLVLGTSLICGGLVNLRQEQKYDRRQVDMNLLMLFVALHCHLLPMLFHYAGASEGVAAESSLQLSRAASVIMVIAYFAYLVFQLWTHRQLFEDPVENEEEGDNDSDEAVIGFWSGCVWLVGMTVIIAVLSEYVVQTIEDASNSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVCLGSATQISMFVVPLCVIVAWILGIEMDLKFNLLESGSLTLAIITTAFTLQDGTSHYMKGLVLFLCYIVIGACFFVQKTPSNKNNASNIVLKSARGAVFGT* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0016 443 Pfam Sodium/calcium exchanger protein 276 412 IPR004837 GO:0016021|GO:0055085
Pvu10g0016 443 Pfam Sodium/calcium exchanger protein 86 244 IPR004837 GO:0016021|GO:0055085
Pvu10g0016 443 TIGRFAM cax: calcium/proton exchanger 70 417 IPR004798 GO:0006816|GO:0015369
Pvu10g0016 443 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 4 431 - -
Pvu10g0016 443 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 4 431 IPR004713 GO:0006812|GO:0008324|GO:0016021
Pvu10g0016 443 TIGRFAM caca2: calcium/proton exchanger 50 417 - -
Pvu10g0016 443 Gene3D - 116 258 IPR044880 -
Pvu10g0016 443 Gene3D - 261 418 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0016 Pvu-Chr10 496423 500752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0016 3 425 Antiporters AT2G38170 67.674 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0016 K07300 - gmx:100782052 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1075 8 11900393 11904283 Pvu10g0016 10 496423 500752 PCT