Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0010 ATGGCAACCCAATTGAACCATGTGTTCAGAACTTCAATTCTGAAGCTCAAAACACAATCAGAGACCCCTTTGAGAACCTCATCAAGAACCCAAAGATTTGAAGTGATCAATGCAACATCTTCTACCAGCAGTGCAAGGCAGCTCATAGAGTCTGGCACAGTGAGGCCTATATTGGCCAAAGATGCTTCCTCAGCCATAAACTCAGAGGGCTTTATTCTCCTTGATGTTAGGCCAACATGGGAGAGAGAGAAGGCACGTGTGGCAGGGTCTTTACACGTGCCAATCTTTGTGGAAGACAAGGATAACAGTCCTATAACTTTACTAAAGAAGTGGGTGCATTTTGGGTATATTGGCTTGTGGACTGGCCAGTACCTCACTACTGTGAATTCTGAGTTCCTTAGTCAAGTGGAAAATCACATTCCTGGTAAGGACACCAAGCTTCTTGTGGCATGTGGAGAAGGATTGAGGTCAATGACAGCAGCTTCAAAACTGTATAATGGAGGTTACAAAAATCTGGGATGGTTGGCTGGAGGATTTAATCGTTCAAAGGACAATGACTTCCCATCAGCAGAAGGAAAAGAGAAGTTGCAGTATGCTACAGTTGGGGGAGCTTCTTACATATTCCTTCAGTTGCTCATATTTCTAAAGGCTGTGGGATAG 660 0.4409 MATQLNHVFRTSILKLKTQSETPLRTSSRTQRFEVINATSSTSSARQLIESGTVRPILAKDASSAINSEGFILLDVRPTWEREKARVAGSLHVPIFVEDKDNSPITLLKKWVHFGYIGLWTGQYLTTVNSEFLSQVENHIPGKDTKLLVACGEGLRSMTAASKLYNGGYKNLGWLAGGFNRSKDNDFPSAEGKEKLQYATVGGASYIFLQLLIFLKAVG* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0010 219 CDD RHOD 61 180 - -
Pvu10g0010 219 ProSiteProfiles Rhodanese domain profile. 67 191 IPR001763 -
Pvu10g0010 219 Pfam Rhodanese-like domain 59 181 IPR001763 -
Pvu10g0010 219 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 1 219 IPR044614 -
Pvu10g0010 219 SMART rhod_4 57 188 IPR001763 -
Pvu10g0010 219 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 50 192 IPR036873 -
Pvu10g0010 219 Gene3D - 54 201 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0010 Pvu-Chr10 428380 429869 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0010 1 206 Sulfurtransferasese or Rhodanese AT3G08920 53.883 8.61e-79 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0010 - - gmx:100795945 381.333