Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0005 ACAAACTCAAGATATGCAGAGGAAAATGTGGTTCCTAAGAATAAAAAACGAAGGATAATTCCGAGAAGTACACCACCACCAAAAGAATTGCTTCTAGAATTCAAGAATCGAATCAATGAATTAAATGGTTGTGATCTTCAATTTCTCATGCTCAAGAGACTCTTCCGTTCCGATGTAAAGACAAATAATAATCGTTTGTCAATGCCAATAAAAGAGATAAGAGCTGACTTTCTCACCAAAGAAGAAATTACAAAGTTGAACGAAAGAGAAAATGGTAGCGACGATGGAAGACTTATTGGTTTGAAAGTAACCATGTTGGACCCTTGCCTCAAAGAATATACTCTACCAATGAAAAAGTGGAGTATGACCACAAACACTTACAATCTTGTAAAGGAATGGAACAAGATTGTGTCTGCTAACAAGTTCGAAGAAGATCAAGAACTACAAATATGGTCTTTCAGAGTTAACAACAATTTGTATTTGCTCTTAAACAAACTTTGA 501 0.3493 TNSRYAEENVVPKNKKRRIIPRSTPPPKELLLEFKNRINELNGCDLQFLMLKRLFRSDVKTNNNRLSMPIKEIRADFLTKEEITKLNERENGSDDGRLIGLKVTMLDPCLKEYTLPMKKWSMTTNTYNLVKEWNKIVSANKFEEDQELQIWSFRVNNNLYLLLNKL* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0005 166 Gene3D - 38 165 IPR015300 -
Pvu10g0005 166 PANTHER DUF313 DOMAIN PROTEIN 13 164 - -
Pvu10g0005 166 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 13 164 IPR005508 GO:0003677
Pvu10g0005 166 SUPERFAMILY DNA-binding pseudobarrel domain 50 161 IPR015300 -
Pvu10g0005 166 Pfam B3 domain-containing protein At2g31720-like 38 138 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0005 Pvu-Chr10 373046 373546 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0005 17 165 B3 DNA Binding Superfamily AT1G05930 23.841 2.34e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0005 - - pvu:PHAVU_006G044100g 196.052