Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02627 ATGCTAACTGATGCATCTATACTACTTCTTAAGAACCATCCCTTGAGTTTGACACCTTTCTTGCATGCTACGCATGATCCAATTATGACAAAGCCATGGAGTCAATTTTCTACTTGGTTTAAAAATGGTGATCATATTACACCATTTGAAACGGCATACGGGATGTCGTTATGGGATTATGCTGGCCGTGAGCCGAAACTTAATGACTTATTCAATGATGCCATGGAGAGTGACTCTCGATTGGCCACTAGTTTGGTGATTGAGAAGTGCAAGGGAGTGTTCATGGGATTGGAGTCATTGGTTGATGTTGGGGGAGGCACAGGGACCATGGCAAAGGCCATTGCTAAAATATTCCCACAGATGCAATGCATTGTATTAGATCTCCCACATGTTGTTGCTGCCTTGCAAGGAAGTGATCAAAACCTAAAATACGTTGGAGGGGACATGTTTGAGGTGATTCCTCCAGCCGATGCCATTTTGTTGAAGGTAACGAAACTAGTAGTATTATATTTCCGACACTTTCAACATGTCTTGCTTAATTTACTGGTTAATTTCATGTTAATTGGAAAAGAGTGA 576 0.4132 MLTDASILLLKNHPLSLTPFLHATHDPIMTKPWSQFSTWFKNGDHITPFETAYGMSLWDYAGREPKLNDLFNDAMESDSRLATSLVIEKCKGVFMGLESLVDVGGGTGTMAKAIAKIFPQMQCIVLDLPHVVAALQGSDQNLKYVGGDMFEVIPPADAILLKVTKLVVLYFRHFQHVLLNLLVNFMLIGKE 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02627 191 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 14 162 IPR029063 -
Pumo9g02627 191 Gene3D Vaccinia Virus protein VP39 10 180 IPR029063 -
Pumo9g02627 191 PANTHER O-METHYLTRANSFERASE 2 163 IPR016461 GO:0008168
Pumo9g02627 191 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 191 IPR016461 GO:0008168
Pumo9g02627 191 Pfam O-methyltransferase domain 33 162 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02627 Pumo-Chr9 62324031 62324606 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02627 9 162 Monolignol Biosynthesis Gene Families AT5G54160 37.419 1.16e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02627 - - gmx:100781008 268.085