Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02626 ATGGAATCCCACGATGGAGATGGAGAGCATAGTGCCAAAGTGCTTCAAGCTCAAACCCACGTATGGAATCACATTTTGAGCTTCATAAACTCCATGTCCCTTAAATGCGTTGTTGACTTAGGCATACCAGATGTGATACACAACTATGGCCAACCCATGTCACTTTCAAACCTCATTGCTTCATTACCAATCCATCCATCCAAAACCCAATGCATCTATCGTTTGATGCGAATCATGATCCATTCTGGCTTTTTCTCTCAACATAATGTCACCGAGAATGAGTTAGAAGTGGAGTACGTGCTAACTGATGCATCTATACTACTTCTCAAGAACCATCCAATGAGTGTGACACCTTTCTTGCATGCCATGCTTGATCCAGTTATGACAAATCCGTGGAATCAATTTTCTACCTGGTTCAAAAATGGTGATGTCACACCATTTGAAACTGCACACGGGATGTCGTTATGGGATTATGCTGGCCGTGAGCCGAAACTTAATCACTTATTCAATGATGCCATGGCCAGTGACGCTCGATTGGTCTCTAGTTTTGTGATTGAGAAGTGCAAGGGAGTGTTCATGGGATTGGAGTCATTGGTTGATGTTGGGGGAGGCACAGGGACCATGGCGAAGGCCATTGCCAAGTCATTCCCACAGATGCAATGCATTGTATTAGATCTCCCACATGTTGTTGCTGCCTTGCAAGCAAGTCATCAAAACCTAAAATATGTCGGAGGGGACATGTTTGAGGTGATTCCTCCAGCCGATGCCATTTTGTTGAAGTCGATATTGCATGACTGGAATGACGAGGAATGCGTGAGCATATTGAAGAAGTGCAAGGAGGCAATCACGAGGGAAGGCAAAAAAGGGAAGGTGATTATCATAGACATGGTGATGAATGATGACAAGAGAGATGATGAATCAGTGGAAACACAACTCCTCTTTGACATGCTGATGATGGTGTTACTCACTGGAAAAGAGAGAAACAAGAAAGAATGGGTTAAGTTGATTTCATCTGCAGGTTTCAGTGACTATAAGATAACTCCAGTCTTGGGCTTCAGGTCTCTCATTGAGATCTACCCATAG 1083 0.4367 MESHDGDGEHSAKVLQAQTHVWNHILSFINSMSLKCVVDLGIPDVIHNYGQPMSLSNLIASLPIHPSKTQCIYRLMRIMIHSGFFSQHNVTENELEVEYVLTDASILLLKNHPMSVTPFLHAMLDPVMTNPWNQFSTWFKNGDVTPFETAHGMSLWDYAGREPKLNHLFNDAMASDARLVSSFVIEKCKGVFMGLESLVDVGGGTGTMAKAIAKSFPQMQCIVLDLPHVVAALQASHQNLKYVGGDMFEVIPPADAILLKSILHDWNDEECVSILKKCKEAITREGKKGKVIIIDMVMNDDKRDDESVETQLLFDMLMMVLLTGKERNKKEWVKLISSAGFSDYKITPVLGFRSLIEIYP 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02626 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 360 IPR016461 GO:0008168
Pumo9g02626 360 PIRSF O-mtase 1 360 IPR016461 GO:0008168
Pumo9g02626 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 358 IPR029063 -
Pumo9g02626 360 Pfam O-methyltransferase domain 132 342 IPR001077 GO:0008171
Pumo9g02626 360 PANTHER O-METHYLTRANSFERASE 15 345 IPR016461 GO:0008168
Pumo9g02626 360 FunFam Coniferyl alcohol 9-O-methyltransferase 4 108 - -
Pumo9g02626 360 CDD AdoMet_MTases 198 294 - -
Pumo9g02626 360 Gene3D - 3 108 IPR036388 -
Pumo9g02626 360 Pfam Dimerisation domain 32 79 IPR012967 GO:0046983
Pumo9g02626 360 Gene3D Vaccinia Virus protein VP39 109 360 IPR029063 -
Pumo9g02626 360 FunFam O-methyltransferase ZRP4 110 360 - -
Pumo9g02626 360 SUPERFAMILY "Winged helix" DNA-binding domain 10 113 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02626 Pumo-Chr9 62302263 62311747 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02626 32 346 Monolignol Biosynthesis Gene Families AT5G54160 32.500 1.26e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02626 - K16040 gmx:100807238 614.379