Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02625 ATGTCACTTTCAAACCTCATTGCTTCATTACCAATCCATCCATCCAAAACCCAATGCATCTATCGTTTGATGCGAATCATGATCCATTCTGGCTTTTTCTCTCAACATAATGTCACCGAGAATGAGTTAGAAGTGGAGTACGTGCTAACTGATGCATCTATACTACTTCTCAAGAACCATCCAATGAGTGTGACACCTTTCTTGCATGCCATGCTTGATCCAGTTATGACAAATCCGTGGAATCAATTTTCTACCTGGTTCAAAAATGGTGATGTCACACCATTTGAAACTGCACACGGGATGTCGTTATGGGATTATGCTGGCCGTGAGCCGAAACTTAATCACTTATTCAATGATGCCATGGCCAGTGACGCTCGATTGGTCTCTAGTTTTGTGATTGAGAAGTGCAAGGGAGTGTTCATGGGATTGGAGTCATTGGTTGATGTTGGGGGAGGCACAGGGACCATGGCGAAGGCCATTGCCAAGTCATTCCCACAGATGCAATGCATTGTATTAGATCTCCCACATGTTGTTGCTGCCTTGCAAGCAAGTCATCAAAACCTAAAATATGTCGGAGGGGACATGTTTGAGAGGCGTCTAAGCTGTGTCAGAGAGGTATGCAAGTAA 627 0.4418 MSLSNLIASLPIHPSKTQCIYRLMRIMIHSGFFSQHNVTENELEVEYVLTDASILLLKNHPMSVTPFLHAMLDPVMTNPWNQFSTWFKNGDVTPFETAHGMSLWDYAGREPKLNHLFNDAMASDARLVSSFVIEKCKGVFMGLESLVDVGGGTGTMAKAIAKSFPQMQCIVLDLPHVVAALQASHQNLKYVGGDMFERRLSCVREVCK 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02625 208 SUPERFAMILY "Winged helix" DNA-binding domain 1 61 IPR036390 -
Pumo9g02625 208 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 208 IPR016461 GO:0008168
Pumo9g02625 208 Gene3D Vaccinia Virus protein VP39 57 202 IPR029063 -
Pumo9g02625 208 Pfam O-methyltransferase domain 80 200 IPR001077 GO:0008171
Pumo9g02625 208 Gene3D - 1 56 IPR036388 -
Pumo9g02625 208 PANTHER O-METHYLTRANSFERASE 1 198 IPR016461 GO:0008168
Pumo9g02625 208 FunFam - 60 181 - -
Pumo9g02625 208 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 61 197 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02625 Pumo-Chr9 62283005 62284188 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02625 1 196 Monolignol Biosynthesis Gene Families AT5G54160 32.000 2.64e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02625 - K16040 gmx:100781008 335.109