Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02593 ATGCCGGAAACCGAACACTCGGCGGCGCAGAACACCGCCCTGTTCGGAAAATACGAGGTCGGAAGGCTCCTAGGATGCGGCGCGTTCGCGAAGGTGTACCACGCGCGCAACACCGAGACGGGGCAGAGCGTGGCCGTGAAGGTCATAAGCAAGAAGAAGCTGCACTCGTCAGGGTTGGCCTCCAACGTGAAACGCGAAATCGCCATCTTGAGCCGCCTCCACCACCCCAACATCGTGAAACTCCACGAAGTGCTGGCCACGAAGACCAAGATTTACTTCATCTTGGAATTCGCGAAAGGCGGCGAGCTTTTCGCGAGAATCGCGAAGGGTAGATTCAGCGAAGATCTCGCGAGACGGTACTTTCAACAACTCATCTCCGCCGTCGGTTACTGCCACGCGCGCGGCGTTTTCCACCGTGACCTGAAGCCGGAGAATCTGCTCCTCGACGAACAGGGGAACCTTAAAGTCTCCGACTTTGGACTCAGTGCGGTGAAGGACCAGATAGGGGTGGATGGGTTGCTTCACACGCTGTGTGGGACCCCTGCTTACGTGGCACCGGAGATTCTGGCGAAGAAGGGTTACGATGGGGCTAAGGTTGATGTCTGGTCTTGTGGGATTATCCTCTTTGTTCTTATTGCTGGGTATCTTCCGTTTAATGATCCGAATTTGATGGTGATGTACAAGAAGATTTACAAAGGGGAGTTTCGGTGTCCGAGGTGGTTTTCGATGGAGTTAAGGAGGCTATTGGCGAGGTTGTTGGACACGAATCCAGAGACGAGGATCACCGTTGATGAGATCATGAGGGACCCGTGGTTTAAGAAAGGGTATAAGGAGGTGAAGTTCGGTGATTTGGGTTTGGAGTGGAAGGGTGAGGGTGAGGGTGTGAAGGATTTGAATGCTTTTGATATTATTTCGTTTTCCACAGGGTTGAATCTCTCTGGGTTGTTCGATTTGTCTTGTGGGGTGGAGGAGGGAGAGAGGCTTTTGCTCAAGGAGTCGCCGGAGAAGGTGGTGGAGACGGTGGCGGCGGCGGCGGAGAAGGAGGGGATTGTGGTGAGGACGAGGAAGGAGTGTGGGGTAGAGTTGGAGGGGTGTGGGGGTAATTTCGCAGCCTTGGTGGAGGTTTACCGGTTACCGGGGGAACTGGTTGTGGTGGAGGTTAGGAGGAGGGATGGGGATGGTGGGGTTTTTAGGGATGTGTGGAGGAATAAGCTGAGGAAGTGTCTGTGTGCTGCGAGTAGCAGTACGACGTCGGATCGGGAGGGAACTGGGGCGAAGCCGGTTGCCGGTGAACCATGA 1299 0.5489 MPETEHSAAQNTALFGKYEVGRLLGCGAFAKVYHARNTETGQSVAVKVISKKKLHSSGLASNVKREIAILSRLHHPNIVKLHEVLATKTKIYFILEFAKGGELFARIAKGRFSEDLARRYFQQLISAVGYCHARGVFHRDLKPENLLLDEQGNLKVSDFGLSAVKDQIGVDGLLHTLCGTPAYVAPEILAKKGYDGAKVDVWSCGIILFVLIAGYLPFNDPNLMVMYKKIYKGEFRCPRWFSMELRRLLARLLDTNPETRITVDEIMRDPWFKKGYKEVKFGDLGLEWKGEGEGVKDLNAFDIISFSTGLNLSGLFDLSCGVEEGERLLLKESPEKVVETVAAAAEKEGIVVRTRKECGVELEGCGGNFAALVEVYRLPGELVVVEVRRRDGDGGVFRDVWRNKLRKCLCAASSSTTSDREGTGAKPVAGEP 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02593 432 Gene3D Transferase(Phosphotransferase) domain 1 8 287 - -
Pumo9g02593 432 CDD CIPK_C 299 410 - -
Pumo9g02593 432 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Pumo9g02593 432 SUPERFAMILY Protein kinase-like (PK-like) 15 278 IPR011009 -
Pumo9g02593 432 FunFam Non-specific serine/threonine protein kinase 8 302 - -
Pumo9g02593 432 ProSiteProfiles NAF domain profile. 293 317 IPR018451 GO:0007165
Pumo9g02593 432 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Pumo9g02593 432 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02593 432 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02593 432 Gene3D Kinase associated domain 1, KA1 293 412 - -
Pumo9g02593 432 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 389 - -
Pumo9g02593 432 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02593 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Pumo9g02593 432 Pfam NAF domain 297 353 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02593 Pumo-Chr9 61795494 61797697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02593 1 418 CBL-interacting serine-threonine protein kinases AT2G30360 63.741 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pumo9g02593 Pkinase 3.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02593 - - gmx:100815088 788.875