Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02588 ATGGGTAACAACAGGTTCAAGTTGTCAGATATGATACCAAATGCTTGGTTTTACAAGCTGAAAGATATGAGCAGATCAAGGAAGAGAAATGGTTCTCATGTTATGAAGAGTAAAGTATCTTCACCAACAACATCACAAAGGTCGCTGCCAAGATATTCACACTATTTCTCCACTGAGCCAATAAGAGCTGGTAAGCTATACAATACTCCTATTCACACCAAAGACTTGGACATGCCATCATTCACTGATTCACCTAGAAGGTCATCCAAGAGAAGGGCTAGGAGAAAAACCATTTACAAGCCTTCTCCCACTGTGGTTTCATCCTCTTTCATTCCCACTTCAGGCTATGACTCCACCAATCATTGGATCAAGCCATGCCAAGTTCCATCGCCAGATTATGATGTTTCTTCAGTTGAAAGCTCTTCTGAATCTGATCTCCATGAATATGCTTATTCTGAGTCTGAATGTGACAGCTTTTCTGTTCCTGATTTGCTTAATGGAATAGACACTAATTGCAGCTGCAGAGTTAGCTCTTCCACTAATGACATCATCATTGACATGAACAGTGAGTCCTTCCTTGGGAATCCTGAAAAGCAAGATGGGTTTGATGCAATTTCACAGCTTGGTCTTGCTCCAATATTGACAAGGCCAATCAAGTTTGATGATAAGGTCATTGAAGCCACTGAGTTGACAAGTTCAACTGAATGGGATGAGCTGCTGGATGATCAGTCTTTCTCAATTGAGATTAACAAAGTGGAAAGTAATAGAACTCAAAGGAGGAGAAGAAGCAGTCATAGAAAGCCCTTTGCTAATTCTGCAGGCATAAGGCTTAGAGTCAATTCTCCAAAACTTGCAAGCAGGAAAATTCAAGCCTGTGCAAGAAGGAGTGTGTCATCCACTGCAAGCAAAGGTTCAAGGAGTACAGGCTTCCCAGATGGATTTGCTGTTGTTAAGTCCTCATTTGATCCACAGAGTGACTTCAGGGAGTCAATGGTGGAGATGATTGTGGAGAAAAATATCCGGGCATCGAAAGATTTGGAGGACTTGCTTGCATGCTACCTTTCCCTCAATCCAAGTGAATACCATGATCTCATTGTTAAAGCATTTGAGCAAATTTGGTTTGACATGGCTCAACTTAGAATGTAA 1146 0.4136 MGNNRFKLSDMIPNAWFYKLKDMSRSRKRNGSHVMKSKVSSPTTSQRSLPRYSHYFSTEPIRAGKLYNTPIHTKDLDMPSFTDSPRRSSKRRARRKTIYKPSPTVVSSSFIPTSGYDSTNHWIKPCQVPSPDYDVSSVESSSESDLHEYAYSESECDSFSVPDLLNGIDTNCSCRVSSSTNDIIIDMNSESFLGNPEKQDGFDAISQLGLAPILTRPIKFDDKVIEATELTSSTEWDELLDDQSFSIEINKVESNRTQRRRRSSHRKPFANSAGIRLRVNSPKLASRKIQACARRSVSSTASKGSRSTGFPDGFAVVKSSFDPQSDFRESMVEMIVEKNIRASKDLEDLLACYLSLNPSEYHDLIVKAFEQIWFDMAQLRM 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02588 381 MobiDBLite consensus disorder prediction 27 53 - -
Pumo9g02588 381 MobiDBLite consensus disorder prediction 74 98 - -
Pumo9g02588 381 Pfam DNA-binding domain 1 43 IPR025830 GO:0003677
Pumo9g02588 381 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 119 376 IPR038933 GO:0045892
Pumo9g02588 381 Pfam Transcriptional repressor, ovate 320 376 IPR006458 -
Pumo9g02588 381 NCBIfam uncharacterized plant-specific domain TIGR01568 314 376 IPR006458 -
Pumo9g02588 381 ProSiteProfiles OVATE domain profile. 316 375 IPR006458 -
Pumo9g02588 381 MobiDBLite consensus disorder prediction 35 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02588 Pumo-Chr9 61725721 61727168 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pumo9g02588 Ovate 1.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02588 - - gmx:100780926 676.396