Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02587 ATGGGAGAAAATTGTTATGTGGAAACCGACCCAACTGGTCGATATGGCAGGTTTGGAGATGTTCTTGGAAAAGGGGCAATGAAGACAGTGTACAAAGCAATTGATGAGGTACTTGGAATTGAGGTAGCATGGAACCAGGTCAGACTCAACGAGGCGCTTCGCACCCCGGACGATTTGCAGCGGCTTTACTCAGAGGTTCATCTCCTCAGTACCCTCAAGCATCAGTCCATCATAAGATTCTACACTTCTTGGATTGATGTTGATAACAAGGCCTTCAACTTTATCACAGAATTGTTCACATCAGGGTCGCTGAGAGAATACAGGAAGAAATATAAGCGCGTCAGCATGCAAGCTATAAAGAATTGGGCTCGCCAAATCTTACAAGGTCTTGTTTATCTACATTGCCATGATCCACCTGTGATCCATAGGGACCTTAAATGTGATAACATATTTGTCAATGGTCATCTTGGACAAGTAAAAATTGGTGACCTGGGACTGGCTGCAATTCTTCGCGGTTCCCAATCAGCACACAGTGTTATAGGCACCCCTGAGTTCATGGCACCAGAATTGTATGAGGAAGAATACAATGAACTAGCTGATGTGTACTCATTTGGCATGTGTCTGTTGGAAATGCTCACATCTGAATATCCATATAGTGAATGTTCTAATCCAGCACAAATCTACAAGAAAGTTACATCGGGAAAACTACCAATGGCCTTTTACCGGATTGAAGAGATGGAAGCACAAAGGTTTATTGGAAAATGTTTAGTACCAGCAGAAAAGAGACCGTCAGCAAAAGAATTGTTGCTTGACCCTTTTCTTGTGTCTGATGATCCATCATCAACAATGAAGTTTGCAATTCAGAAGCCTTTTTTGAATGCCAGTGAGTTGGGGAAACTGCAATTAAGTGATGATCTTCCTAGGACTGGAATGAAAGTGATAGGGAAGCTGAATCCTGAAGATGACACTATCTTTCTCAAAGTGCAAATTTCTGATAAGGATGGTTCTGTTAGGAATGTATTTTTTCCCTTTGAAATTTTCAGTGACACCCCTATTGATGTTGCAACTGAGATGGTGAAAGAGTTGGAGATTGCTGATTGGGAGCCTTTTGAGATTGCAAATATGATTGATAGAGAGATATCTGCTCTGCTACCTCACAGGAGGCAAAGTAGCTGTTCAGATGCCTTCCACACATTCAATTATCTAGATGATGATTGTGATGATGATGGACCTCATCATCATTTCCGCTCGTTCTCTTCTAGTTCATCATTCCAAGAATCAATGTCAGATTTAGTCAGTAAAGCTGAGGAAATATCAAGTGGATATTATTGTCTCCATGCAGATGATTTGCATGATGATACCAGTTCACGATGCTCTTCACAAGGGACATATTCCAACTTGAACTACTATTTTGTGGATGATCATCAAGAGTACAACGTGCCATCTTTGAGAAAAGACAAACTTCCCATCATAAAGAGTCACAATAACAAGGGCAAAAAGGTTTCATCTGGCGAAGACTTGAGCAATTTCAACCAGTGTAAAGTCATGGTAGGATCACAGGTTCCTTTTACTAGTAAAAATAAGATGATGATAAACAATCGTCATCATAGATTAACAAGGAACAGGTCATTGATTGATATAAGGAGCCAACTATTGCACCGATCACTGGTTGAAGAGGTACACAAAAGACGGTTATTCAAGACAGTTGGTGCTGTGGAAAATATTGGATTTCAGGCACCTTGTGATGTTACCACAAAAAGGTCACAGCATGTGTGTGGTGCTCCAAATGTGAACTCTCCAAGGAGTGGCAAGGGAGAAAAAATTAAGAGATGA 1833 0.4086 MGENCYVETDPTGRYGRFGDVLGKGAMKTVYKAIDEVLGIEVAWNQVRLNEALRTPDDLQRLYSEVHLLSTLKHQSIIRFYTSWIDVDNKAFNFITELFTSGSLREYRKKYKRVSMQAIKNWARQILQGLVYLHCHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQSAHSVIGTPEFMAPELYEEEYNELADVYSFGMCLLEMLTSEYPYSECSNPAQIYKKVTSGKLPMAFYRIEEMEAQRFIGKCLVPAEKRPSAKELLLDPFLVSDDPSSTMKFAIQKPFLNASELGKLQLSDDLPRTGMKVIGKLNPEDDTIFLKVQISDKDGSVRNVFFPFEIFSDTPIDVATEMVKELEIADWEPFEIANMIDREISALLPHRRQSSCSDAFHTFNYLDDDCDDDGPHHHFRSFSSSSSFQESMSDLVSKAEEISSGYYCLHADDLHDDTSSRCSSQGTYSNLNYYFVDDHQEYNVPSLRKDKLPIIKSHNNKGKKVSSGEDLSNFNQCKVMVGSQVPFTSKNKMMINNRHHRLTRNRSLIDIRSQLLHRSLVEEVHKRRLFKTVGAVENIGFQAPCDVTTKRSQHVCGAPNVNSPRSGKGEKIKR 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02587 610 SUPERFAMILY Protein kinase-like (PK-like) 17 296 IPR011009 -
Pumo9g02587 610 ProSiteProfiles Protein kinase domain profile. 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02587 610 Gene3D Transferase(Phosphotransferase) domain 1 99 280 - -
Pumo9g02587 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Pumo9g02587 610 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Pumo9g02587 610 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02587 610 FunFam probable serine/threonine-protein kinase WNK9 99 279 - -
Pumo9g02587 610 FunFam Probable serine/threonine-protein kinase WNK1 1 97 - -
Pumo9g02587 610 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 460 - -
Pumo9g02587 610 CDD STKc_WNK 14 274 - -
Pumo9g02587 610 SMART serkin_6 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02587 Pumo-Chr9 61717944 61722192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02587 6 586 MAP Kinase Kinase Kinase AT5G58350 59.760 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pumo9g02587 Pkinase 3.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02587 K08867 - gmx:100272203 1088.17