Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02584 ATGCAAGATCCATCTTCAAACCCTAATTCCAATCCAAATCCCAATCCTCACAATGCCAATGCCGCATTGCAATTACCGCGCCCGCCGCCGGCAACGGCGGCCACCACCGCCGGCGCCGGCGCCTCCTCGTCCTCGCTGTTCGCGCGCTCCGGCGGGTCTCACCACCGGCGGGCCCACTCGGAGGTGAGTTTCCGGCTGTCGGACGACATGATGGACCTGTCGCCGTCGGATCCGTTCGCCGGTGGGTCGTCGACGGCGAGCATGGAGGAGATCGGATCGGAGGACGACCTTTTCTCGACGTACATTGACGTGGACAAGCTCGGCGGCGCCGGAAACGGAGCGGATCCGAACGGCGAAGGGGAGAAGAGTCCGGCGAGGCCGCGGCACCGGCACAGTAGCTCCGTCGATTTCGGGGAAATTATGGAAGCGAAGAAGGCTATGCCTCCTGATAAGTTGGCTGAGCTGTGGACAATTGATCCCAAGCGTGCTAAGAGAATACTTGCAAATCGGCTATCAGCTGCTAGATCGAAGGAGAGGAAAGCGCGCTATATACAAGAACTTGAGCGCAAGGTTCAGACTCTTCAGACGGAAGCCACAACTCTTTCTGCCCAATTGACCTTATACCAGAGGGACACAACTGGCCTGAGTACTGAAAATACAGAACTTAAGCTCCGTCTGCAAGCCATGGAGCAACAAGCACAGCTTCGCGATGCTCTTAATGAAGCATTGAAGAAGGAAGTTGAGAGACTTAAGGTTGCTACTGGTGAGATGATGAGCTACACTGAATCCTTTAATCTGGGAATGCACCAGATGCCGTTTACAGGATCAAATTTCGTTCCAATCCCGCCACAATCAGGTCCTTCTGGTCACCAGAACATGCACATACCACCATTTGGTCACTCCCCATCCACAATGCCAACTCATCAACTGCATCAAACAAGTTCTCATCCACTTTCAGAAATATTGCAAAATGACCAGCTTGGTCGTTTCCAGGGGCTCGACATCAGTAGCAAAGGATCAACTCTCGTGAAGTCTGAAGGCCCCTCACTCTCTGCAAGTGAGAGTAGCACTACATTTTGA 1080 0.537 MQDPSSNPNSNPNPNPHNANAALQLPRPPPATAATTAGAGASSSSLFARSGGSHHRRAHSEVSFRLSDDMMDLSPSDPFAGGSSTASMEEIGSEDDLFSTYIDVDKLGGAGNGADPNGEGEKSPARPRHRHSSSVDFGEIMEAKKAMPPDKLAELWTIDPKRAKRILANRLSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKVATGEMMSYTESFNLGMHQMPFTGSNFVPIPPQSGPSGHQNMHIPPFGHSPSTMPTHQLHQTSSHPLSEILQNDQLGRFQGLDISSKGSTLVKSEGPSLSASESSTTF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02584 359 Coils Coil 177 204 - -
Pumo9g02584 359 CDD bZIP_plant_RF2 162 211 IPR044759 GO:0003700|GO:0006355
Pumo9g02584 359 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 159 222 IPR004827 GO:0003700|GO:0006355
Pumo9g02584 359 MobiDBLite consensus disorder prediction 1 20 - -
Pumo9g02584 359 MobiDBLite consensus disorder prediction 1 91 - -
Pumo9g02584 359 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 3 323 - -
Pumo9g02584 359 Gene3D - 160 212 - -
Pumo9g02584 359 MobiDBLite consensus disorder prediction 121 135 - -
Pumo9g02584 359 SMART brlzneu 157 221 IPR004827 GO:0003700|GO:0006355
Pumo9g02584 359 FunFam probable transcription factor PosF21 160 213 - -
Pumo9g02584 359 Coils Coil 225 256 - -
Pumo9g02584 359 Pfam bZIP transcription factor 161 216 IPR004827 GO:0003700|GO:0006355
Pumo9g02584 359 MobiDBLite consensus disorder prediction 339 359 - -
Pumo9g02584 359 MobiDBLite consensus disorder prediction 108 135 - -
Pumo9g02584 359 MobiDBLite consensus disorder prediction 302 316 - -
Pumo9g02584 359 MobiDBLite consensus disorder prediction 36 50 - -
Pumo9g02584 359 SUPERFAMILY Leucine zipper domain 161 212 IPR046347 GO:0003700|GO:0006355
Pumo9g02584 359 MobiDBLite consensus disorder prediction 278 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02584 Pumo-Chr9 61658668 61661757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02584 1 359 bZIP Transcription Factor Family AT2G40620 49.879 7.41e-103 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo9g02584 bZIP_1 3.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02584 - - gmx:100815680 547.354