Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02572 ATGGCAGAGGTTACTTTGAATTCAAGTGTCAATATCTTATACCTTACAACCAAAAAAATCTCAATGAAGCTCTACTCCCCTCAAGTGCATCATTTCCTTTTCATCATTGTTATTCTTTGTCCTCTGGTTGTTGCTGACTTAAGTTCTGATAAGCAAGCCCTTCTTGATTTTGCTGCTGCTGTTCCCCATCGCCGTAACCTTAAGTGGAATCCAGCTACCCGAATCTGTACATCTTGGGTAGGTGTCACTTGCAATCCAAATGGCACTCGTGTTGTTTCTCTCCGGCTCCCTGGAATTGGACTAGTGGGCACCATCCCTGCCAATACACTTGGCAAGATTGACTCACTTAGAAATATCAGCCTCCGCGCCAACCTACTCAGTGGAAGTCTTCCTCCTGATATTACTTCTATTCCTTCTCTACAATATCTCTACCTTCAGCATAATAACCTCTCTGGTAACATACCGACCTCGTTGTCCACCCGCCTCAATGTACTTGATTTGTCATACAATTCCTTCACCGGTGCTATTCCGAAGACATTACAAAACTTAACACAACTAACTAGGTTGAACCTCCAGAACAACTCCCTATCTGGACTGATACCAAATCTCAATGTCACTAAGCTCAGGCACTTGAATTTAAGCTACAACCATTTGAATGGCTCTATCCCTTCTGCTCTTCAGATTTTCCCGAATTCTTCCTTTGAGGGTAACTCTCTATGTGGATCACCTCTAAAATCATGCTCTGCAGTCCCCCCACCTCCTCCATCGTCGACTCCTGCCCCACCATCTACTCCTACAAGACATGGCTCCAAAAGTAAACTGAGCAAGGCGGCTATCATTGCAATTGCAGTTGGTGGGGGCGTGCTATTGCTTTTACTAGCTCTCATCATTGTTCTTTGCTGTTTAAAGAAAAAAGATGACGGAAGAAGCCCCAGAGCAGCTAAAGGCAAGGGTCCTAGTGGTGGGAGAAGTGAGAAGCCGAAAGAAGAGTTTGGAAGTGGGGTGCAAGAACCTGAGAAAAACAAGTTGGTTTTCTTTGAGGGAAGTTCTTATAATTTTGATCTTGAGGATTTGCTGAGAGCTTCGGCTGAAGTTCTTGGAAAGGGTAGTTATGGTACTGCATATAAGGCTATATTGGAGGAGTCAACAACAGTTGTAGTGAAGAGGTTGAAGGAAGTCGTGGTAGGCAAAAGGGAATTTGAACAGCAGATGGAGATTGTGGGAAGTGTTGGACATCACCCAAATGTTGTGCCACTTCGTGCTTATTATTATTCTAAGGATGAGAAGCTTTTGGTTTATGACTACATCCCAAGTGGCAACCTATCTACCCTCTTGCATGGTAACAGGGCAAGTGGAAGAACTCCATTAGATTGGAACTCCCGAATAAAAATCTCCGTTGGAATTGCCAGAGGAATTGCTCACATACATTCTGTTGGCGGTCCAAAATTCACGCACGGAAATGTCAAATCCTCAAATGTCCTCCTCAACCAAGATAATGATGGCTGCATTTCTGACTTTGGCCTGACCCCACTTACGAATGTTCCTGCCACCCCTTCTAGAGCTGCAGGATATCGCGCTCCTGAAGTGATTGAAACGCGTAAGCACACTCACAAGTCAGACGTGTACAGTTTTGGTGTCCTCCTTCTGGAAATGCTGACTGGGAAAGCGCCGCAACAGTCTCCAGGACGCGATGACATGGTTGATCTCCCAAGGTGGGTCCAGTCTGTTGTTCGGGAGGAGTGGACGGCTGAGGTTTTCGATGTGGAGCTAATGAGGTACCAAAACATTGAAGAGGAAATGGTGCAAATGTTGCAAATTGCCATGGCTTGTGTGGCAAAGGTTCCAGATATGAGGCCTAGCATGGAGGAAGTAGTGAGAATGATTGAAGAGATCCGGCAATCCGACTCGGAAAACCGGCCATCTTCGGAAGAGAATAGATCCAAGGAGGAATCAACTGCTCAAACTCCATAA 1971 0.4541 MAEVTLNSSVNILYLTTKKISMKLYSPQVHHFLFIIVILCPLVVADLSSDKQALLDFAAAVPHRRNLKWNPATRICTSWVGVTCNPNGTRVVSLRLPGIGLVGTIPANTLGKIDSLRNISLRANLLSGSLPPDITSIPSLQYLYLQHNNLSGNIPTSLSTRLNVLDLSYNSFTGAIPKTLQNLTQLTRLNLQNNSLSGLIPNLNVTKLRHLNLSYNHLNGSIPSALQIFPNSSFEGNSLCGSPLKSCSAVPPPPPSSTPAPPSTPTRHGSKSKLSKAAIIAIAVGGGVLLLLLALIIVLCCLKKKDDGRSPRAAKGKGPSGGRSEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESTTVVVKRLKEVVVGKREFEQQMEIVGSVGHHPNVVPLRAYYYSKDEKLLVYDYIPSGNLSTLLHGNRASGRTPLDWNSRIKISVGIARGIAHIHSVGGPKFTHGNVKSSNVLLNQDNDGCISDFGLTPLTNVPATPSRAAGYRAPEVIETRKHTHKSDVYSFGVLLLEMLTGKAPQQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKVPDMRPSMEEVVRMIEEIRQSDSENRPSSEENRSKEESTAQTP 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02572 656 ProSitePatterns Protein kinases ATP-binding region signature. 366 397 IPR017441 GO:0005524
Pumo9g02572 656 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 436 643 - -
Pumo9g02572 656 Pfam Leucine rich repeat 161 218 IPR001611 GO:0005515
Pumo9g02572 656 Pfam Leucine rich repeat N-terminal domain 48 85 IPR013210 -
Pumo9g02572 656 Gene3D Ribonuclease Inhibitor 48 159 IPR032675 -
Pumo9g02572 656 Gene3D Transferase(Phosphotransferase) domain 1 436 655 - -
Pumo9g02572 656 MobiDBLite consensus disorder prediction 629 650 - -
Pumo9g02572 656 PANTHER OS05G0588300 PROTEIN 32 643 - -
Pumo9g02572 656 Gene3D Phosphorylase Kinase; domain 1 328 435 - -
Pumo9g02572 656 MobiDBLite consensus disorder prediction 307 336 - -
Pumo9g02572 656 MobiDBLite consensus disorder prediction 245 270 - -
Pumo9g02572 656 SUPERFAMILY L domain-like 61 229 - -
Pumo9g02572 656 Pfam Protein kinase domain 363 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02572 656 MobiDBLite consensus disorder prediction 629 656 - -
Pumo9g02572 656 FunFam Leucine-rich repeat receptor-like protein kinase 160 247 - -
Pumo9g02572 656 MobiDBLite consensus disorder prediction 247 262 - -
Pumo9g02572 656 FunFam pollen receptor-like kinase 1 328 435 - -
Pumo9g02572 656 ProSiteProfiles Protein kinase domain profile. 360 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g02572 656 CDD STKc_IRAK 366 631 - -
Pumo9g02572 656 FunFam Leucine-rich repeat receptor-like protein kinase 49 159 - -
Pumo9g02572 656 Gene3D Ribonuclease Inhibitor 160 249 IPR032675 -
Pumo9g02572 656 SUPERFAMILY Protein kinase-like (PK-like) 364 639 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02572 Pumo-Chr9 61505478 61510953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02572 32 654 Receptor kinase-like Gene Family AT5G58300 69.634 0.0 876
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo9g02572 Pkinase 1.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02572 - - gmx:100818344 1117.83