Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02570 ATGGAGGAAATCATTTTTCCCATCATAGTAAAGATTGCAGAATATACCATTGGTCCAGTTTTACACCATGCTCAATATTTGTGTTGTTTCAACAACTTTGTTGGGAATCTTCTAAATGTCAAAGAAGAATTAGAATTGAATCGACACAACATGATGGAACGAGTTAGAAAAGCCACTAATAGGACTGAAATAATTGAACCAACTGTTGAGAAGTGGCTGAAAGATGTTGAGAAAGTCTTAAAAGAAGTGCAAATGCTGGAAGGAAGAATTTCAGAAGTAAGCAAGGGCTATTTTAGAAGCAAATGTCATTATTTTCTTACAAAAGAAATAGCAAGAAAAATAGAAACAATGACTTTGCTCAATCTTAATAGCAACTTTGAGCCATTTTCAAGGATTTCTGAACTTCCAGGCATGAAGTACTATTCTTCCCAAGATTTTGTTCTTTTCAAATCTACAGAATCAGCTTACAATGAGCTTTTGGAAGCATTAACTAGTAAAAGTGTCCGCATGATTGGACTACTTGGAATTGGGGGTTCAGGAAAAACTACTTTAGTGAAAGAGGTGGGTAAGAAAGTTGAGGAGTTAAAACTTTTTGAGAAGGTTGTCATGGCAACGATCTCTGAAACTCCAAATATCAGAAGCATCCAAGAGCAAATTGCTGATAAGTTAGGTTTCAAACTAGAGGAAAAATCAGACGAAGGTAGAGCACAAAGACTATCACAAATATTAATGGAAGGTGCAATTCTTCTAATCTTGGATGATGTATGGGAAAAGCTAAACTTTGAAGCTTTAGGTATTCCATTCCATGAAAACAAGGATTTTGGAGTACTCCTAACAACTCGGATTAGAGAAGTATGCACTTCTATGCAATGTCAAAGTATAATTGAGCTCAATCTCTTAACTGGTGAGGAAGCTTGGACTTTGTTCAAATTGTATGCAAACATCACTGATGACTCCCCATATGCTTCGAAAAGTGTGGGACCAAAAATTGTTGATGAATGCAAAGGATTGCCCATCGCAATTGTAACGGTGGGAAGCACGCTCAGGGGGAAAAGTTTAGGAGAATGGAAGTCAGCATTGTCAAGACTACAAGATTCCAAACCACTGGTTATTCCAAAAGGCCTAAGAAGTCCTCATGCATGTCTTCAATTAAGTTATGATAATTTGACAGATGAATTAGCCAAGTCCTTGTTCTTGTTGTGTTCTATATTTCCAGAGGATCATGAAATTGATTTAGAAGATTTGTTTCGATTTGGAAGGGGACTAGGGTTAACTGGGACTTCAGGAACAATAGAGAAAGCAAGGGGGGAGATGCATGTAGCTATTAATATCCTTAGGGATTCTTGTTTGTTGCTTCAAGCTAGTAATAAAAGGGTGAAAATGCATGACATGATTCGTGATGTAGCCTTGTGGATAGCATCTGAAAAAGGTCAAGCAATTTTGGCAAGTGTTGCAATGGATCCAAGAATGTTGGTAGAGGATGAAACCATGAAAGATAAGAGAGCAATATCCTTATGGGATTTGAAAAATGGTCAACTTCTTGATGATGATCAATTGAATTGTCCAACACTTGAAATTCTCTTGCTTCATTCTCCAAAGGTTGGCTTTGAAATACCAAATGGGTGTCTTGAAAGGATGAAAATGCTTAAAATCTTGGCATTCTTAACATATGGCTATGAGTGGATTGTATATTCACCATGGATTAATGCATCAACATTTACTTTGTCATTGCCACAGTCAATGGAGTCATTAAAAAATCTTCGAACTCTGTGCTTGAGAGGTTATAAATTGGGTGACATCTCTATTTTGGAAAGCTTACAAGCACTCGAGATTCTTGATTTGCGTGGTTCTTATTTTGAAGAATTGCCTAATGGAATTGCAACATTAAAGAAATTGAAGCTTCTAGATTTGTACAACTGTTGGATTGAGAAAAATAATGCTTTTGAGGTTATAGGAAAATGTTTGCTGCTAGAAGAACTGTATTTGTATCTATTCCTATCTAAAGATGACTTTCCACATAATGTCTCTTTCTCAAGATTGCAGAGGTATGTTATAATACAATATCGTTACCCCGACTACAAGCGACAAACTGAAAATTTGGAGAAGTATAGACCTTCTAGAGCTTTATGCATAGATGGTTTTAATGCCCCTGTTCAAATTTTTATATCATTACCAATCAAGGATCTCTTTCCAGGGGTAGAGCTGCTTCATTTGAAGGACCTTAAGGGAGGTTACAAAAATGTAATCCCATCGATGGATAAAAAAGGCATGAATCAATTGATTGTCCTAAAGCTCGAATATTGTCTAGAGATAGAATGCCTCTTTGACAGTACTATCATTACCAACACCAATGTTTATCTCCTTCATACCGAATTTGTGTTCTCTAGCCTAGTTTCCTTAAGGCTGCTTCACTTAGATAGCCTTCAAGAAGTGTTTCGTGACCCCTCTTCGCAATGCTCTCTAAACAATTTAGAAGATTTATGGATACAAGATTGTATGCAATTGTACAACATATCCTTTCCAAGATACTCAAAGCTATGTTGTCTCAAGGTCTTGACAATAACAAGTTGCCCAATGCTAACTTCTCTCTTCATGCCATCCATTGCCCAAACTTTGGAGCTGCTAGAGGTCCTAGAAATATCCAAATGTAGTGGATTGAAGCGCATAATAGAAGAAGTCGAAGAGGGGAATGCTAGTAGTCAAAGTCATATTGCTTTGACGCTCCAAAAATTAAGACATCTTTATATATGTGAATGCCACGGGTTGGAATATATATTCCCTGTGTGTTTTACTCGAGGTTTACTAAGTTTGAAAAAGTTGATCATTCGAAACTGCTATGAGTTGAAGTATGTATTTGGCACTGAAAAGGAACATCATCTTTCAGCAGTGTACAAGCATCAGAGTCATCATGAGACTAATATTGAGATAAATTTGCCTAATTTGGATACTTTCAGGTTGGATTCATTACCAAATCTGGTTGACATTTGGCCTGTATATTGTCGTCCAAGTTTATCAAATTTGAAAGAGTTACAATGCACTGGGTGTGAAAGATTGTCTAACTCTTCTGTGCGTAAGGTGGTGATTGATTCAGACCTACAAGAAGACACAATTGCAATGGTAATGTATTATTAA 3132 0.3665 MEEIIFPIIVKIAEYTIGPVLHHAQYLCCFNNFVGNLLNVKEELELNRHNMMERVRKATNRTEIIEPTVEKWLKDVEKVLKEVQMLEGRISEVSKGYFRSKCHYFLTKEIARKIETMTLLNLNSNFEPFSRISELPGMKYYSSQDFVLFKSTESAYNELLEALTSKSVRMIGLLGIGGSGKTTLVKEVGKKVEELKLFEKVVMATISETPNIRSIQEQIADKLGFKLEEKSDEGRAQRLSQILMEGAILLILDDVWEKLNFEALGIPFHENKDFGVLLTTRIREVCTSMQCQSIIELNLLTGEEAWTLFKLYANITDDSPYASKSVGPKIVDECKGLPIAIVTVGSTLRGKSLGEWKSALSRLQDSKPLVIPKGLRSPHACLQLSYDNLTDELAKSLFLLCSIFPEDHEIDLEDLFRFGRGLGLTGTSGTIEKARGEMHVAINILRDSCLLLQASNKRVKMHDMIRDVALWIASEKGQAILASVAMDPRMLVEDETMKDKRAISLWDLKNGQLLDDDQLNCPTLEILLLHSPKVGFEIPNGCLERMKMLKILAFLTYGYEWIVYSPWINASTFTLSLPQSMESLKNLRTLCLRGYKLGDISILESLQALEILDLRGSYFEELPNGIATLKKLKLLDLYNCWIEKNNAFEVIGKCLLLEELYLYLFLSKDDFPHNVSFSRLQRYVIIQYRYPDYKRQTENLEKYRPSRALCIDGFNAPVQIFISLPIKDLFPGVELLHLKDLKGGYKNVIPSMDKKGMNQLIVLKLEYCLEIECLFDSTIITNTNVYLLHTEFVFSSLVSLRLLHLDSLQEVFRDPSSQCSLNNLEDLWIQDCMQLYNISFPRYSKLCCLKVLTITSCPMLTSLFMPSIAQTLELLEVLEISKCSGLKRIIEEVEEGNASSQSHIALTLQKLRHLYICECHGLEYIFPVCFTRGLLSLKKLIIRNCYELKYVFGTEKEHHLSAVYKHQSHHETNIEINLPNLDTFRLDSLPNLVDIWPVYCRPSLSNLKELQCTGCERLSNSSVRKVVIDSDLQEDTIAMVMYY 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02570 1043 Coils Coil 69 89 - -
Pumo9g02570 1043 Gene3D Ribonuclease Inhibitor 719 894 IPR032675 -
Pumo9g02570 1043 SUPERFAMILY L domain-like 460 952 - -
Pumo9g02570 1043 Coils Coil 41 61 - -
Pumo9g02570 1043 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 37 925 - -
Pumo9g02570 1043 Pfam NB-ARC domain 155 388 IPR002182 GO:0043531
Pumo9g02570 1043 Gene3D - 141 297 IPR027417 -
Pumo9g02570 1043 Gene3D Ribonuclease Inhibitor 499 703 IPR032675 -
Pumo9g02570 1043 FunFam Probable disease resistance protein At1g61300 134 293 - -
Pumo9g02570 1043 Gene3D Ribonuclease Inhibitor 901 1029 IPR032675 -
Pumo9g02570 1043 Gene3D - 300 385 IPR042197 -
Pumo9g02570 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 401 IPR027417 -
Pumo9g02570 1043 PRINTS Disease resistance protein signature 170 185 - -
Pumo9g02570 1043 PRINTS Disease resistance protein signature 334 348 - -
Pumo9g02570 1043 PRINTS Disease resistance protein signature 870 886 - -
Pumo9g02570 1043 PRINTS Disease resistance protein signature 242 256 - -
Pumo9g02570 1043 Gene3D - 386 470 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02570 Pumo-Chr9 61241602 61244733 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02570 168 640 WRKY Transcription Factor Family AT5G45050 23.792 1.09e-15 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02570 - - gmx:102662074 1348.95